Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03540 ATAAAGAAATAAACAATGACGGGCGTCTGGCGGCGCCTGTTGCCCCTTTCCCCCCAAACATATATTTCCGACACTATTCTTGTGTGTTCATTTTTGACATCAAAATCAATACCATGGTTTGAATTCAGTCGGAGTTCAAATTCTTCTTTCTTTGTCTTTCAAGTTTGAAACTTCGAACAAATATTTCCTCACCCATTTCCCTTTCTCATAAATCCATCCATCGTCTCCTCTGTCTCTTAGTACGCTTGTTGTTTGATGCCCTGTTTTTCTGTCTTGGTTTGACGGTCGGAACTTGGGACATGGATTTTGCTGTTTGGAACTTTTTGAAAAATGTTCGTGTTCTTGTGTTTGTGTTCTTGGTTTTGAACTGTTTCTTGGGCTTTGGATCCGATGCACAACCTCTGCCTGAACAAGAAGTAAGAGCCCTTCAAGCAATATCTGCAGAGCTAAGGAACTTAAACTGGAATGTTCACCAAAATTCTTGCATTAATGGTGATGGATTTTTCAACAGAGCTATCCGTGGTACAGATATTATCAGAGAGGTTAATTGCACTTGCACCACTGTTTGCAGAGTCACTAGCATCCGGCTAAAGGGTTTGAATCTAACTGGAACTCTGCCAGCAGCATTTGGAAATTTGACTCAACTGCAAAGGATAGATCTTACTCGCAATTTAATTTCTGGATCAATCCCTAAAGAGTTTGCTCAGATTCCTCTTTTTGATTTGTCCATGTTGGGAAATCGTCTTAGTGGCCAAATTCCTCCAGAAATTGGTGACATTGCTACACTTGAGCATTTGGTTTTGGAAGACAATCTTCTTGAAGGGAATCTTCCCGAAAGCCTCGGGCGGCTGAGCCGCTTGCAAAGATTACTTCTTTCTGCAAATAATTTCAATGGAACAATTCCAGCATCTTATGGAAACTTGAAGAACTTAACTGATTTCCGGATCGATGGAAATGATGTATCAGGAAGGCTTCCTGAATTTATTGGCAATTGGACCAAACTTGTGAGACTGGATATTCAAGGAACTTCTATGGAGACCCCTATTCCTAGAGGCATATCTGACTTGAAAAACTTAACCCAATTGAGGATAACTGATTTGAAGGGACTGCCAACAAGTTTTCCTAATTTGACTCAATTGACATCTTTAGAAGAACTGGTTCTAAGAAATTGCTTAATCCGGGATCGGATTCCTGGATATATTGGACTGTTTAATAGTTTAAAAACTTTAGATCTAAGCTTCAATGAATTGAGTGGTCCAATTCCAGACACATTTCAGAATCTAGATAGAGTTACTCAGTTCTTGTTTTTGACCAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATCTTGAACAGTGAAAGGAGCATAGATTTATCTTACAACAATTTTACAGGGTCCCCTGTTTCAAGTTGTCAGCAGTCTGATGTGAACTTGGTTTCAAGTTATTCAACTACAATGAATGAAACTGTTGCTTGGTGCTTGAGGAAGGATCTCCCTTGCCCAAGAGAAACTCGTTTTCATTCCTTGTTCATAAATTGTGGAGGACCAAGGATGGAGGTTGATGGTAATGAATATGAAGAGGATGCAACTCCAGGTGGCAAATCCAATTTCCTTTCTATCTCTGATAGATGGGCTTATAGCAGTACTGGTGTTTTCCTGGGAGATGAGAATGCTAATTACAGAGAAACAAGTAGCAATGCATCTATTCCGAACATCTACCGAACCGCTCGACTCGCACCTCTTTCGCTCAAGTATTATGGTCTTTGCTTAAGAAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTATACTGCTGACCAAACATTCAGCAGCTTGGGAGAGCGCATATTTGATATCTCAATTCAAGGAAATTTGGTTCAAAAAGATTTTAACATAATGGAGAAAGCTGGTGGTGTTGGTAAGACCTTTATTCTAGAAGAGCCTAATATTTTGGTGAATGGAAGTACTCTTGAGATTCACTTATATTGGGCTGGTAAAGGAACTACTGCCATTCCAGACAGAGGGGTGTATGGACCTTTGATATCTGGCATCACAGTCACACCAAACTTTGATGTGGAGACTGGAAGGCTATCAGCTGGAGATATTGCTGGGATTGTTGTTGGTTGTTTTGTGTTTGTTGTGTTGGTATTGGCTGTTCTTAGATGGAAAGGTTATTTGGGTAGAAAGGAGACCGAAGACAGTGAATTGAAGGCCCTAGATTTACAAACAGGCTATTTCAGTTTGAGACAAATCAAAACAGCCACCAACAACTTCGACCCGACGTATAAGATAGGCGAAGGAGGTTTTGGTCCTGTCTTCAAGGGTGTATTGTCGGACGGTACTTTGATCGCAGTAAAGCAACTATCTGCTAAATCAAGACAAGGAAACCGTGAATTCGTCACTGAGATTGGAATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAACCAGTTATTGCTTGTTTATGAGTATCTAGAGAACAATAGTCTTGCCCGCGCTCTTTTCGGCGCCGAGGAGCACCGATTACACTTGGATTGGACGATACGAATGAAGATATGCTTGGGAATAGCAAAAGGATTGGCTTACCTTCATGAAGAATCTGTATTGAAAATTGTTCATAGAGATATTAAAGCTACCAACGTGTTACTTGATAAAAATTTGAATGCCAAGATTTCTGACTTTGGATTGGCTAGGCTTGATGAAGAGGAGAACACCCATATCAGCACAAGAATCGCTGGCACAATAGGTTACATGGCTCCTGAATATGCGATGAGAGGCTACTTAACCGATAAAGCAGATGTTTATAGCTTCGGAGTTGTTGCTTTAGAGATTGTTAGTGGAAAAAGCAACACAAATTACCGGCCAAAAGAGGAATTTGTTTATCTTCTCGACTGGGCTTATGTTCTACAAGAGCAAGGAAACCTTCTCGAACTCGTTGATCCGAGTTTGGACTCACATTATTCGAAAGAAGAGGTGATGAGGATGATTCATATAGCTCTGTTATGTACAAATCCATCTCCAACTCTTAGGCCATCCATGTCTTCAGTGGTTCGTATGCTGGAAGGAAAAATTGCAGTGCAAGCGCCGATCATAAAGCGCGGTGCAGACGACCAAGAAGCGAGGTTCAAAGCGTTCGAAAGGCTGTCACAAGATAGCATAACAAGCATTTCAACATCATCACAAGGCATTCCAATGCAAAAAAGCATGTTGATTGATGGGCCATGGGTTGATTCCACTACTTCAACTCAAAACAGGGATGAAACTCAAGATTATTCTTCAACCAGAAATCTCCTTTAGGATCTACAGATTCAATCAAATCAAAGCTACAATGAGTTTGATGTTATTATTTTTTATTTTAAAACTTCCATTCATGTTCTTTTTTTATAGAGTGTTTGTGTGTGTGCTACATAGTTTGAAGGTGCGGCTAGAATTATGTAATTAAATTTTAAAACACAAATATGCAAAATATTTTTTAATTTTGAAAAATAGATGAGAAGAATATTATTCGTTGTAGGTATACCTCAATATATAAGGAATAATTTGTAGTTTGTTTATTTAAAAAAAAAAAAATTTGTAACATTCCAGACCCAGGATTCAGAATCCAAATTCGACAAATTATTTGC 3661 39.2 MDFAVWNFLKNVRVLVFVFLVLNCFLGFGSDAQPLPEQEVRALQAISAELRNLNWNVHQNSCINGDGFFNRAIRGTDIIREVNCTCTTVCRVTSIRLKGLNLTGTLPAAFGNLTQLQRIDLTRNLISGSIPKEFAQIPLFDLSMLGNRLSGQIPPEIGDIATLEHLVLEDNLLEGNLPESLGRLSRLQRLLLSANNFNGTIPASYGNLKNLTDFRIDGNDVSGRLPEFIGNWTKLVRLDIQGTSMETPIPRGISDLKNLTQLRITDLKGLPTSFPNLTQLTSLEELVLRNCLIRDRIPGYIGLFNSLKTLDLSFNELSGPIPDTFQNLDRVTQFLFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNETVAWCLRKDLPCPRETRFHSLFINCGGPRMEVDGNEYEEDATPGGKSNFLSISDRWAYSSTGVFLGDENANYRETSSNASIPNIYRTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTADQTFSSLGERIFDISIQGNLVQKDFNIMEKAGGVGKTFILEEPNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVETGRLSAGDIAGIVVGCFVFVVLVLAVLRWKGYLGRKETEDSELKALDLQTGYFSLRQIKTATNNFDPTYKIGEGGFGPVFKGVLSDGTLIAVKQLSAKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGAEEHRLHLDWTIRMKICLGIAKGLAYLHEESVLKIVHRDIKATNVLLDKNLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLDSHYSKEEVMRMIHIALLCTNPSPTLRPSMSSVVRMLEGKIAVQAPIIKRGADDQEARFKAFERLSQDSITSISTSSQGIPMQKSMLIDGPWVDSTTSTQNRDETQDYSSTRNLL 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 89108686 89120873 - XM_039043007.1 Bhi09g03540 46157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03540 1011 Gene3D Ribonuclease Inhibitor 268 382 IPR032675 -
Bhi09g03540 1011 Gene3D Transferase(Phosphotransferase) domain 1 738 954 - -
Bhi09g03540 1011 CDD STKc_IRAK 668 935 - -
Bhi09g03540 1011 Gene3D - 408 593 - -
Bhi09g03540 1011 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03540 1011 Pfam Malectin domain 410 588 IPR021720 -
Bhi09g03540 1011 SUPERFAMILY Protein kinase-like (PK-like) 646 937 IPR011009 -
Bhi09g03540 1011 PANTHER - 70 296 - -
Bhi09g03540 1011 PANTHER - 298 352 - -
Bhi09g03540 1011 PANTHER - 381 996 - -
Bhi09g03540 1011 Gene3D Ribonuclease Inhibitor 36 267 IPR032675 -
Bhi09g03540 1011 Pfam Protein tyrosine and serine/threonine kinase 667 933 IPR001245 GO:0004672|GO:0006468
Bhi09g03540 1011 Pfam Leucine Rich Repeat 306 328 IPR001611 GO:0005515
Bhi09g03540 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 296 - -
Bhi09g03540 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 298 352 - -
Bhi09g03540 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 381 996 - -
Bhi09g03540 1011 SUPERFAMILY L domain-like 83 366 - -
Bhi09g03540 1011 Gene3D Phosphorylase Kinase; domain 1 628 737 - -
Bhi09g03540 1011 ProSiteProfiles Protein kinase domain profile. 662 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03540 1011 MobiDBLite consensus disorder prediction 986 1011 - -
Bhi09g03540 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03298 Bhi-Chr1:82772405 Bhi09g03540 Bhi-Chr9:89108686 1.25E-07 dispersed
Bhi01g03299 Bhi-Chr1:82772405 Bhi09g03540 Bhi-Chr9:89108686 1.25E-07 dispersed
Bhi09g03540 Bhi-Chr9:89108686 Bhi09g03543 Bhi-Chr9:89209795 0 dispersed
Bhi09g03539 Bhi-Chr9:89093149 Bhi09g03540 Bhi-Chr9:89108686 6.61E-06 tandem
Bhi09g03540 Bhi-Chr9:89108686 Bhi09g03541 Bhi-Chr9:89108694 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88186 PF07714 PK_Tyr_Ser-Thr 1.50E-49 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03540 - - csv:101222014 1789.62