Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03541 GAATGTTCACCAAAATTCTTGCATTAATGGTGATGGATTTTTCAACAGAGCTATCCGTGGTACAGATATTATCAGAGAGGTTAATTGCACTTGCACCACTGTTTGCAGAGTCACTAGCATATGCACCCTAAATATTCAACAGCCGGCTAAAGGGTTTGAATCTAACTGGAACTCTGCCAGCAGCATTTGGAAATTTGACTCAACTGCAAAGGATAGATCTTACTCGCAATTTAATTTCTGGATCAATCCCTAAAGAGTTTGCTCAGATTCCTCTTTTTGATTTGTCCATGTTGGGAAATCGTCTTAGTGGCCAAATTCCTCCAGAAATTGGTGACATTGCTACACTTGAGCATTTGGTTTTGGAAGACAATCTTCTTGAAGGGAATCTTCCCGAAAGCCTCGGGCGGCTGAGCCGCTTGCAAAGATTACTTCTTTCTGCAAATAATTTCAATGGAACAATTCCAGCATCTTATGGAAACTTGAAGAACTTAACTGATTTCCGGATCGATGGAAATGATGTATCAGGAAGGCTTCCTGAATTTATTGGCAATTGGACCAAACTTGTGAGACTGGATATTCAAGGAACTTCTATGGAGACCCCTATTCCTAGAGGCATATCTGACTTGAAAAACTTAACCCAATTGAGGATAACTGATTTGAAGGGACTGCCAACAAGTTTTCCTAATTTGACTCAATTGACATCTTTAGAAGAACTGGTTCTAAGAAATTGCTTAATCCGGGATCGGATTCCTGGATATATTGGACTGTTTAATAGTTTAAAAACTTTAGATCTAAGCTTCAATGAATTGAGTGGTCCAATTCCAGACACATTTCAGAATCTAGATAGAGTTACTCAGTTCTTGTTTTTGACCAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATCTTGAACAGTGAAAGGAGCATAGATTTATCTTACAACAATTTTACAGGGTCCCCTGTTTCAAGTTGTCAGCAGTCTGATGTGAACTTGGTTTCAAGTTATTCAACTACAATGAATGAAACTGTTGCTTGGTGCTTGAGGAAGGATCTCCCTTGCCCAAGAGAAACTCGTTTTCATTCCTTGTTCATAAATTGTGGAGGACCAAGGATGGAGGTTGATGGTAATGAATATGAAGAGGATGCAACTCCAGGTGGCAAATCCAATTTCCTTTCTATCTCTGATAGATGGGCTTATAGCAGTACTGGTGTTTTCCTGGGAGATGAGAATGCTAATTACAGAGAAACAAGTAGCAATGCATCTATTCCGAACATCTACCGAACCGCTCGACTCGCACCTCTTTCGCTCAAGTATTATGGTCTTTGCTTAAGAAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTATACTGCTGACCAAACATTCAGCAGCTTGGGAGAGCGCATATTTGATATCTCAATTCAAGGAAATTTGGTTCAAAAAGATTTTAACATAATGGAGAAAGCTGGTGGTGTTGGTAAGACCTTTATTCTAGAAGAGCCTAATATTTTGGTGAATGGAAGTACTCTTGAGATTCACTTATATTGGGCTGGTAAAGGAACTACTGCCATTCCAGACAGAGGGGTGTATGGACCTTTGATATCTGGCATCACAGTCACACCAAACTTTGATGTGGAGACTGGAAGGCTATCAGCTGGAGATATTGCTGGGATTGTTGTTGGTTGTTTTGTGTTTGTTGTGTTGGTATTGGCTGTTCTTAGATGGAAAGGTTATTTGGGTAGAAAGGAGACCGAAGACAGTGAATTGAAGGCCCTAGATTTACAAACAGGCTATTTCAGTTTGAGACAAATCAAAACAGCCACCAACAACTTCGACCCGACGTATAAGATAGGCGAAGGAGGTTTTGGTCCTGTCTTCAAGGGTGTATTGTCGGACGGTACTTTGATCGCAGTAAAGCAACTATCTGCTAAATCAAGACAAGGAAACCGTGAATTCGTCACTGAGATTGGAATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAACCAGTTATTGCTTGTTTATGAGTATCTAGAGAACAATAGTCTTGCCCGCGCTCTTTTCGGCGCCGAGGAGCACCGATTACACTTGGATTGGACGATACGAATGAAGATATGCTTGGGAATAGCAAAAGGATTGGCTTACCTTCATGAAGAATCTGTATTGAAAATTGTTCATAGAGATATTAAAGCTACCAACGTGTTACTTGATAAAAATTTGAATGCCAAGATTTCTGACTTTGGATTGGCTAGGCTTGATGAAGAGGAGAACACCCATATCAGCACAAGAATCGCTGGCACAATAGGTTACATGGCTCCTGAATATGCGATGAGAGGCTACTTAACCGATAAAGCAGATGTTTATAGCTTCGGAGTTGTTGCTTTAGAGATTGTTAGTGGAAAAAGCAACACAAATTACCGGCCAAAAGAGGAATTTGTTTATCTTCTCGACTGGGCTTATGTTCTACAAGAGCAAGGAAACCTTCTCGAACTCGTTGATCCGAGTTTGGACTCACATTATTCGAAAGAAGAGGTGATGAGGATGATTCATATAGCTCTGTTATGTACAAATCCATCTCCAACTCTTAGGCCATCCATGTCTTCAGTGGTTCGTATGCTGGAAGGAAAAATTGCAGTGCAAGCGCCGATCATAAAGCGCGGTGCAGACGACCAAGAAGCGAGGTTCAAAGCGTTCGAAAGGCTGTCACAAGATAGCATAACAAGCATTTCAACATCATCACAAGGCATTCCAATGCAAAAAAGCATGTTGATTGATGGGCCATGGGTTGATTCCACTACTTCAACTCAAAACAGGGATGAAACTCAAGATTATTCTTCAACCAGAAATCTCCTTTAGGATCTACAGATTCAATCAAATCAAAGCTACAATGAGTTTGATGTTATTATTTTTTATTTTAAAACTTCCATTCATGTTCTTTTTTTATAGAGTGTTTGTGTGTGTGCTACATAGTTTGAAGGTGCGGCTAGAATTATGTAATTAAATTTTAAAACACAAATATGCAAAATATTTTTTAATTTTGAAAAATAGATGAGAAGAATATTATTCGTTGTAGGTATACCTCAATATATAAGGAATAATTTGTAGTTTGTTTATTTAAAAAAAAAAAAATTTGTAACATTCCAGACCCAGGATTCAGAATCCAAATTCGACAAA 3212 38.98 MLGNRLSGQIPPEIGDIATLEHLVLEDNLLEGNLPESLGRLSRLQRLLLSANNFNGTIPASYGNLKNLTDFRIDGNDVSGRLPEFIGNWTKLVRLDIQGTSMETPIPRGISDLKNLTQLRITDLKGLPTSFPNLTQLTSLEELVLRNCLIRDRIPGYIGLFNSLKTLDLSFNELSGPIPDTFQNLDRVTQFLFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNETVAWCLRKDLPCPRETRFHSLFINCGGPRMEVDGNEYEEDATPGGKSNFLSISDRWAYSSTGVFLGDENANYRETSSNASIPNIYRTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTADQTFSSLGERIFDISIQGNLVQKDFNIMEKAGGVGKTFILEEPNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVETGRLSAGDIAGIVVGCFVFVVLVLAVLRWKGYLGRKETEDSELKALDLQTGYFSLRQIKTATNNFDPTYKIGEGGFGPVFKGVLSDGTLIAVKQLSAKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGAEEHRLHLDWTIRMKICLGIAKGLAYLHEESVLKIVHRDIKATNVLLDKNLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLDSHYSKEEVMRMIHIALLCTNPSPTLRPSMSSVVRMLEGKIAVQAPIIKRGADDQEARFKAFERLSQDSITSISTSSQGIPMQKSMLIDGPWVDSTTSTQNRDETQDYSSTRNLL 868
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 89108694 89117424 - XM_039043008.1 Bhi09g03541 46158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03541 868 SMART serkin_6 519 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03541 868 PANTHER - 155 209 - -
Bhi09g03541 868 PANTHER - 238 853 - -
Bhi09g03541 868 PANTHER - 1 153 - -
Bhi09g03541 868 Gene3D - 265 450 - -
Bhi09g03541 868 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 238 853 - -
Bhi09g03541 868 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 155 209 - -
Bhi09g03541 868 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 153 - -
Bhi09g03541 868 SUPERFAMILY Protein kinase-like (PK-like) 503 794 IPR011009 -
Bhi09g03541 868 Gene3D Ribonuclease Inhibitor 125 240 IPR032675 -
Bhi09g03541 868 MobiDBLite consensus disorder prediction 843 868 - -
Bhi09g03541 868 Pfam Malectin domain 267 445 IPR021720 -
Bhi09g03541 868 Gene3D Transferase(Phosphotransferase) domain 1 595 811 - -
Bhi09g03541 868 Gene3D Ribonuclease Inhibitor 1 124 IPR032675 -
Bhi09g03541 868 Pfam Protein tyrosine and serine/threonine kinase 524 790 IPR001245 GO:0004672|GO:0006468
Bhi09g03541 868 CDD STKc_IRAK 525 792 - -
Bhi09g03541 868 ProSiteProfiles Protein kinase domain profile. 519 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03541 868 Gene3D Phosphorylase Kinase; domain 1 485 594 - -
Bhi09g03541 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Bhi09g03541 868 SUPERFAMILY L domain-like 3 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03539 Bhi-Chr9:89093149 Bhi09g03541 Bhi-Chr9:89108694 6.58E-06 dispersed
Bhi09g03541 Bhi-Chr9:89108694 Bhi05g02073 Bhi-Chr5:63229798 0 dispersed
Bhi09g03540 Bhi-Chr9:89108686 Bhi09g03541 Bhi-Chr9:89108694 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88187 PF07714 PK_Tyr_Ser-Thr 1.10E-49 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03541 - - csv:101222014 1582.0