Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03548 TTGATTTCAAAGTATATGATAAGTTTTGTTGCTAATAAGCTTAGGCGTCTAAGGTCACTGAACCTTCCAGGTACTCTGCCACCGCAAATAGTGAAGCTACCTTACTTGCAAGCACTCGATCTTTCCCGCAACTATCTCAGCGGCCCAATTCCTCCAGAATGGGGTGCCACAAAGCTTGTCAACATTTCCCTTCTTGGAAATCGATTTACGGGTCCAATCCCAAAAGAGATTGGAAACATCAGCACTCTTGTGGAGTTGATCCTTGAAGTTAATCAGTTATCAGGAAGTCTACCTCAAGAACTTGGAAACTTGAAGAGTTTATCAAGATTACTTCTTTCCTCAAACAACTTTTCTGGGGAGCTCCCATCTTCACTGGGAAATGTAATCACAATGACGGACTTTCGAATTAGTGATAATCACTTCACAGGGTCAATACCTAAGTATATTCAGAATTGGCCAAATCTTGCAAAACTAAATATTCAGGCAAGCGGGTTGAGTGGACCAATTCCTTCTGAAATTGGACTTTTAACAGCATTAAGTGATCTGAGAATCAGCGACTTGGTTGGAGCTTCATTCCCCTTTCCACCCGTTAATTCTTTGACAAAATTGAAAACCCTGATATTGAGGAGTTGCAATATAAATGGGATGCTGCCTAACAATCTTGATGGATTGGAAGATGTGCAAACCCTAGACTTCAGCTTCAACAAAATTAGTGGACCAATACCTCCTGGCTTTGAAGCTTTGAAAAAAGTGGATAGAATATTTTTAAGCGGGAACTTGCTAACTGGAGCTGTGCCTACTTGGATGCTGCAGGAGGGAGAAAACATTGATATCTCTTATAACAAATTTACTGAGACAGATTTTCAGGCCATTGGTTGTGAAGCACGAAGCATAAACTTATTCTCGAGCTCTTCACAGGACGATACTTCCAGTGGAATAGTTTCATGTTTAGTGGGCTCTTGTGACAAAACTTCGTACTCTCTCCATATCAATTGCGGTGGGAGGGAAAATTTAGTAAACGGAACAATCAGGTTTGATGGAGACACAAACACGGGCAAATCATCATTGTTTTTCCAAGGTGGAACAAATTGGGGATTTAGCAACACGGGTAGCTTTATGGACGATGATCGCTCAACAGATGACTTTATTGCATTAAGTCCACCTGATCTCCCAATGAAAGATTTTGCATTGTACTCGAATGCACGGATTTCTCCAAACTCTCTTACTTATTATGCATTTTGCATGGGTAATGGAAACTACACATTAAGCCTCTATTTTGCTGAGATAGAATTTAGTAACGACAAATCATACAAAAGCCTTGGCAGACGCATATTTGATGTCTACGTTCAGAAAGAGCTGGTGTTGAAGGATTTTAATATTGCTGATGAAGCAGGCGGTGTTGGCAAACCTCTTGTAAAAAAATTCACTGTTTCTGTTACTAATGGTACCATAGAGATCCGTTTCTTTTGGGCTGGGAAGGGGACAACTGCAGTCCCTTTAAGAGGAGTTTATGGTCCTCTGATTTCAGCCATTTCTATTGATCCTGACTTTGATCCACCATTGGAAGGTGGAAACGCCATATCTGCCGGTGCAGTGGTTGGAATTGTGGCTGCTGTGGTCTTTATTATCATCTTGGTTCTTGGGGTCTTGTGGTGGAGAGGCAGCCAAAGAAAGAGAAGCACGCTTGAACAAGAGTTGAAGGACCTCGATTTAGGAACAGGATCATTTTCATTAAGACAAATCAAAGCTTCCACTAACAATTTTGATGTTGCCAATAAGATTGGAGAAGGAGGTTTTGGTCCGGTTTATAAGGGCGTTCTTAACGATGGCAATGTAATTGCAGTGAAGCAACTTTCTTCAAAGTCAAAGCAAGGAAATCGTGAATTTTTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGCTGTATTGAAGGAGATCAACTTTTGCTAATATACGAGTATCTGGAGAATAATAGCCTTGCTCGTGCCTTATTCGGACCTGAAGAATATCAACTGAAATTGGATTGGCCAACTAGGCAGAAGATTTGTATTGGTATTGCTAAAGGTTTAACATACCTTCATGACGAGTCAAGACTAAAGATCGTTCACCGAGACATCAAAGCTACCAATGTTCTTCTCGATAAAAATCTAAACCCCAAGATTTCCGACTTTGGTTTGGCCAGGCTGGATGAAGAAGGAAATACACACATCAGCACAAGGGTTGCCGGAACCTATGGATATATGGCACCAGAATATGCCATGCGAGGCTACTTAACCGACAAAGCAGATGTTTACAGCTTTGGCGTGGTGGCATTAGAAATAGTCGGTGGTCGAAGCAACACAAGTTTTGGAACCAAGGATGATTGTTTATACCTTCTTGACTATGCTAACATTTTAAAAGAGAGAGGGAATTTATTAGACCTTGTGGATCCACGGTTAGGCTCTGAATTCAACAAGACAGAGGCGATGACGATGATCAATATAGCCCTCCAATGCACGAATATCAGTGCTGCAGACAGACCCTCCATGTCAACAGTAGTTGGGATGCTGGAAGGGAAGATTGCTGTGGAGTTGGTTTCAGATCTCAATCCCTCAAAGCAAGATGTGAATGCAATGTGGAACCATATGTACCACCTGAAAGGGAAAACGACGGGCGAGAGTGAGACGCAAAGTATGTTGACATGTGAGAGTGAGACGCAAAGTATGTTGATGGATGGACCATGGACTGATTCTTCAATTGCTGACAGTGATAACCTTCCCATCGTGGTTAATTCTAAATACTCGGAGAACAGGATTTAGTGTTGGTATTAACATGTAACTATGGAAGCCTTCAATTGCTTTGATGTATCCTCATCCTTTGTTGGCTGTTCCACATTCTTTTATTCTTTGTTCCTTTTCATGTTTTTCCA 2936 41.38 MISFVANKLRRLRSLNLPGTLPPQIVKLPYLQALDLSRNYLSGPIPPEWGATKLVNISLLGNRFTGPIPKEIGNISTLVELILEVNQLSGSLPQELGNLKSLSRLLLSSNNFSGELPSSLGNVITMTDFRISDNHFTGSIPKYIQNWPNLAKLNIQASGLSGPIPSEIGLLTALSDLRISDLVGASFPFPPVNSLTKLKTLILRSCNINGMLPNNLDGLEDVQTLDFSFNKISGPIPPGFEALKKVDRIFLSGNLLTGAVPTWMLQEGENIDISYNKFTETDFQAIGCEARSINLFSSSSQDDTSSGIVSCLVGSCDKTSYSLHINCGGRENLVNGTIRFDGDTNTGKSSLFFQGGTNWGFSNTGSFMDDDRSTDDFIALSPPDLPMKDFALYSNARISPNSLTYYAFCMGNGNYTLSLYFAEIEFSNDKSYKSLGRRIFDVYVQKELVLKDFNIADEAGGVGKPLVKKFTVSVTNGTIEIRFFWAGKGTTAVPLRGVYGPLISAISIDPDFDPPLEGGNAISAGAVVGIVAAVVFIIILVLGVLWWRGSQRKRSTLEQELKDLDLGTGSFSLRQIKASTNNFDVANKIGEGGFGPVYKGVLNDGNVIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCIEGDQLLLIYEYLENNSLARALFGPEEYQLKLDWPTRQKICIGIAKGLTYLHDESRLKIVHRDIKATNVLLDKNLNPKISDFGLARLDEEGNTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGVVALEIVGGRSNTSFGTKDDCLYLLDYANILKERGNLLDLVDPRLGSEFNKTEAMTMINIALQCTNISAADRPSMSTVVGMLEGKIAVELVSDLNPSKQDVNAMWNHMYHLKGKTTGESETQSMLTCESETQSMLMDGPWTDSSIADSDNLPIVVNSKYSENRI 936
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 89231930 89241834 + XM_039044183.1 Bhi09g03548 46165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03548 936 SUPERFAMILY L domain-like 12 279 - -
Bhi09g03548 936 Gene3D Phosphorylase Kinase; domain 1 547 658 - -
Bhi09g03548 936 SMART serkin_6 583 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03548 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Bhi09g03548 936 ProSiteProfiles Protein kinase domain profile. 583 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03548 936 Pfam Malectin domain 322 506 IPR021720 -
Bhi09g03548 936 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 209 279 - -
Bhi09g03548 936 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 8 210 - -
Bhi09g03548 936 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 305 900 - -
Bhi09g03548 936 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Bhi09g03548 936 SUPERFAMILY Protein kinase-like (PK-like) 567 869 IPR011009 -
Bhi09g03548 936 Pfam Protein tyrosine and serine/threonine kinase 585 853 IPR001245 GO:0004672|GO:0006468
Bhi09g03548 936 CDD STKc_IRAK 589 856 - -
Bhi09g03548 936 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 210 - -
Bhi09g03548 936 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 305 900 - -
Bhi09g03548 936 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 209 279 - -
Bhi09g03548 936 Gene3D - 318 510 - -
Bhi09g03548 936 Gene3D Transferase(Phosphotransferase) domain 1 659 871 - -
Bhi09g03548 936 Gene3D Ribonuclease Inhibitor 8 116 IPR032675 -
Bhi09g03548 936 Gene3D Ribonuclease Inhibitor 117 182 IPR032675 -
Bhi09g03548 936 Gene3D Ribonuclease Inhibitor 183 289 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03545 Bhi-Chr9:89226706 Bhi09g03548 Bhi-Chr9:89231930 7.00E-07 dispersed
Bhi09g03546 Bhi-Chr9:89226706 Bhi09g03548 Bhi-Chr9:89231930 6.41E-07 dispersed
Bhi09g03548 Bhi-Chr9:89231930 Bhi09g03550 Bhi-Chr9:89232029 1.63E-07 dispersed
Bhi09g03547 Bhi-Chr9:89226707 Bhi09g03548 Bhi-Chr9:89231930 0 tandem
Bhi09g03548 Bhi-Chr9:89231930 Bhi09g03549 Bhi-Chr9:89232029 1.40E-07 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88193 PF07714 PK_Tyr_Ser-Thr 1.20E-47 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03548 - - cmo:103501834 1526.92