Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03556 GCCAGTCTGCGAGGGTCAGTTGTGATTGCACATATGAAAACAATACTATCTGCCACATTACCTATATATATCTGTCATCGGAGGGTTTGGAAGGGATGCTTCCATCTCAGTTGATGTCTAGACTGCCCTACCTTCAGTACCTTGATCTCTCTGATAACAATTTAAGCGGCGAAATCCCTCCGGAATGGGGCAACTCCACCAAGCTTGTCTCTCTTTGACAGGTCTCATTCCAAAACAGATTGGAAACATCACCACTCTTGAAATATTATACTTGCAACAAAATAAGCTACAAGGAAGCTTACCTGCGACACTTGGAGATTTGGTGAACCTGACAACATTGAACTTAGAAGTCAATCATCTATCAGGAAGTTTACCTACAACACTTGAAAATTTGGTGAAGCTGGAAACATTATATCTTGGCTCGAATAACTTTACTGGAAAGCTGCCGGCATCTCTAGGAAAGCTAACCTCATTGACCTCAATTAAAATCAGTGACAATAACTTTGAAGGAGAAATACCAACTTTCATTGAGAATTGGACAAATGTTGTGAGCATAGAGGCTCTAGCAAGTGGATTGAGTGGTCCTATTCCTTCTCAAATTGCTCGTTTGACCAAATTAACCGACCTAAGAATCAGTGACTTGAAGGGGAGTTCAAATTTTCCACCTCTTCAGTATTTGAACGAAATCGAATATCTAATATTAAGAAGTTGCAATATCACTGGGTTGTTTCCCGACTCCTTAATTGGTTCATTCATGTACAGCAACAACCTCATTTATATGTCCACGTTCCCCCGCTTGAAAACTTTAGACCTCAGCTTTAACCAAATAAGTGGCCACATTCCTTCCAACTTTATGTATCTTAGAAGAGTAGAGAACATATTTTTAACTGGAAACTTACTAAATGGTCCAGTGCCTAATTGGATGCTAGAGGAAGGAAACAACATTGATCTCTCTTACAATAATTTTGATCATCCACTATCTTATAGCTGTCAATCAGGAAATACGAACTTGTTTGCAAGCTCGAGAACAAAAAATAATTCTAAACTTGTTTCTTGTCTCGACAACAAATCTTGTTCTGACAATTTGTATGGTCTCCATATAAATTGCGGTGGAAAAGAATTAATCATTAATGCTACTAAGTTTGAAGGAGATGAAGATTCAGGCAAGGCAGCAGTGTTTGTCTCAAGTAAAACAAATTGGGGATTCAGTAATACTGGTCTATTTTCGGATGATACTAGGTGTCCAGCTGACTATACTCATAGGAATAATCGTACCAATGGTCTATATGAGACTGCTCGAGTTTCCCCAGTATCTCTTACATATTATGCGTATTGTCTTGTAAATGGAAACTACAACATAAGCCTCCATTTTGCAGAAATTGTAAATACAAATGATACAATTGTTGGCCGTTCTGGAAGACGCATTTTTAATGTTTACGTTCAGGGGAAGCTAGTGCTGGAGGATTTTAATATCGTAAATGCTGCAGGAGGTGTGCTCAAACCTATCATAAAACCATTCCAAGTTGCTATTACTAATAATACTATAGAGATTCGATTCTACTGGGCTGGAAAGGGGACATATTCCCTTGAGAGTGGAGCCTATGGCCCTCTGATATCAGCCATTTCGATCGAGTACGCCGACTTTGTGCCTCCATCAAAAGCTCGAAAACTCTTACCAGTAGGTGCAATACTTGGAATTGTGGCTGCAGTTGCCTTTAATATTGTTTCAATCCTTGGAATTCTATGGTGGCAAGGTTGCCTTGGACGGAGAAGCAGACTTAGTCAAGATCTCGAAGGTCTAGATTTACAAACTGGTTCATTCACGTTAAGACAAATCAAAGCTGCCACAAATAATTTTGACGTTTCTAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTATAAGGGTTTTCTCTTGGATGGCACTATAATTGCAGTGAAACAACTTTCGTCCAAGTCAAAGCAAGGAACCCACGAGTTTGTGAATGAGATAGGCTTGATATCTGCTTTGAATCACCCACATCTAGTTAAGCTTTATGGATGTTGTACTGAAGAAAAACAACTTTTGCTAGTATATGAATACATGGAAAATAATAGTCTTGCTCAGGCTATGTTTGGACCGAAAGAAAGTCGATTGATATTAGACTGGCCAATAAGGCAGAAAATTTGTATTGGTGTAGCCAAAGGCTTGGCTTATCTTCATGAGGAATCAAGATTGAAGATTGTTCACAGAGATATCAAAGCGACTAATGTATTGTTAGATAAAAATCTCAACCCCAAGATTTCAGATTTTGGTCTTGCCAAGCTTGACGAAGAAGGAAATACCCACATAAGCACACGAATTGCTGGAACTTTTGGTTATATTGCGCCAGAGTACGCAATGCGAGGTTACTTAACTGATAAAGCAGACGTTTACAGTTTTGGCATTGTGGCCTTGGAAATAGTTAGTGGAAGGAGCAATACTACTTATCGATCAAAGGACGACTGCTTTTATCTGCTTGATTGGGCACTTGAATTAAAAGAAAAAGAGAGTTTAATGGAGCTAGTTGATCCAAGGTTAGGGTCCGATTTCAACCAGAGAGAGGCAATGATCATGATAAATATTGCTCTGCATTGCACCAATGTTATTCCAACAGAAAGGCCTAGCATGTCTTTAGTGGTGGGAATGTTGGAAGGCAAGGTTGCTGTGGAGGAGTTGGCTTCACATCCAAAGGAGTCAAGAGCAAAGATGAGTGCAATGTGGACCATTTTGGAACAGAGTTTGAAACGAATTGACAATCAGAACCAAGAAGAGATTATCTCTATGGACATCTCAAATGCCAATTATTCTTCAACATCAACGAGCAAAAATGTATTATGAGTTTGATTTTGTGACTCTTGAAACTACTTCTACAACTGCTTGTAAAGCCTTAAATGATATGTTGTGATCATCTCTAGATTTTGATTTTCTATTATATGCACAATTTACATATCTTCCTTCCAAATATAATGTAAACTATTTATTTCTATTGAGATGACTCTTTTCTTATTAATTACACCAAATTCGACAA 3050 38.46 MGQLHQACLSLTGLIPKQIGNITTLEILYLQQNKLQGSLPATLGDLVNLTTLNLEVNHLSGSLPTTLENLVKLETLYLGSNNFTGKLPASLGKLTSLTSIKISDNNFEGEIPTFIENWTNVVSIEALASGLSGPIPSQIARLTKLTDLRISDLKGSSNFPPLQYLNEIEYLILRSCNITGLFPDSLIGSFMYSNNLIYMSTFPRLKTLDLSFNQISGHIPSNFMYLRRVENIFLTGNLLNGPVPNWMLEEGNNIDLSYNNFDHPLSYSCQSGNTNLFASSRTKNNSKLVSCLDNKSCSDNLYGLHINCGGKELIINATKFEGDEDSGKAAVFVSSKTNWGFSNTGLFSDDTRCPADYTHRNNRTNGLYETARVSPVSLTYYAYCLVNGNYNISLHFAEIVNTNDTIVGRSGRRIFNVYVQGKLVLEDFNIVNAAGGVLKPIIKPFQVAITNNTIEIRFYWAGKGTYSLESGAYGPLISAISIEYADFVPPSKARKLLPVGAILGIVAAVAFNIVSILGILWWQGCLGRRSRLSQDLEGLDLQTGSFTLRQIKAATNNFDVSNKIGEGGFGPVYKGFLLDGTIIAVKQLSSKSKQGTHEFVNEIGLISALNHPHLVKLYGCCTEEKQLLLVYEYMENNSLAQAMFGPKESRLILDWPIRQKICIGVAKGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEGNTHISTRIAGTFGYIAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTTYRSKDDCFYLLDWALELKEKESLMELVDPRLGSDFNQREAMIMINIALHCTNVIPTERPSMSLVVGMLEGKVAVEELASHPKESRAKMSAMWTILEQSLKRIDNQNQEEIISMDISNANYSSTSTSKNVL 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 89292923 89305513 + XM_039042137.1 Bhi09g03556 46173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03556 891 Pfam Malectin domain 304 480 IPR021720 -
Bhi09g03556 891 Gene3D Phosphorylase Kinase; domain 1 527 633 - -
Bhi09g03556 891 SUPERFAMILY L domain-like 7 262 - -
Bhi09g03556 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Bhi09g03556 891 Pfam Leucine Rich Repeat 204 223 IPR001611 GO:0005515
Bhi09g03556 891 Pfam Leucine Rich Repeat 72 94 IPR001611 GO:0005515
Bhi09g03556 891 Gene3D - 302 485 - -
Bhi09g03556 891 ProSiteProfiles Protein kinase domain profile. 558 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03556 891 CDD STKc_IRAK 564 831 - -
Bhi09g03556 891 Gene3D Transferase(Phosphotransferase) domain 1 634 869 - -
Bhi09g03556 891 Gene3D Ribonuclease Inhibitor 3 300 IPR032675 -
Bhi09g03556 891 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 187 - -
Bhi09g03556 891 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 283 874 - -
Bhi09g03556 891 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 283 874 - -
Bhi09g03556 891 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 11 187 - -
Bhi09g03556 891 SMART LRR_typ_2 202 225 IPR003591 -
Bhi09g03556 891 SMART LRR_typ_2 70 94 IPR003591 -
Bhi09g03556 891 SMART LRR_typ_2 22 45 IPR003591 -
Bhi09g03556 891 SMART LRR_typ_2 46 69 IPR003591 -
Bhi09g03556 891 Pfam Protein kinase domain 559 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03556 891 SMART serkin_6 558 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03556 891 SUPERFAMILY Protein kinase-like (PK-like) 542 846 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03554 Bhi-Chr9:89291531 Bhi09g03556 Bhi-Chr9:89292923 0 dispersed
Bhi09g03556 Bhi-Chr9:89292923 Bhi09g03543 Bhi-Chr9:89209795 0 dispersed
Bhi09g03555 Bhi-Chr9:89291531 Bhi09g03556 Bhi-Chr9:89292923 0 tandem
Bhi09g03556 Bhi-Chr9:89292923 Bhi09g03557 Bhi-Chr9:89335314 3.10E-09 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88201 PF00069 Pkinase 2.00E-46 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03556 - - csv:101221782 1049.27