Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03559 AAAGGTAATCAAGAGATCATGTCTTTCATTGTACCTTCTATTCTTGTTGTTCCTTTCTTCATTGTTTTTTTCTTTCTCACTATTCTTGCTTTTCAAGTTCCTCAGTTGCCTCCCGATGAAGTTGAAGGGTTGAAATATGTGGGGAAAATATTAGGAATAGATTGGAATTTAAGTGCAAATCCATGCAGTCCAGAGTTTGCTTGGGTGCCTGCGGATCATCAAAACGACCTATCGGCAATAAGTAATATCACATGCAACTGTGAATATCTTAACCATACCGTTTGCCACGTCACTCATATAGTTCTGCAATCGCTGAATTTGGGAGGCACACTTCCATCTGATCTTTCGAGGCTTCCTTACCTGAAAGTACTTGATCTCGTTCGAACTTATATCAGTGGCCAAATTCCTCCACAATGGGGTTCCACCAAGCTTTGCAAAATTTCCCTACTTGGAAATCGGCTCACCGGTCCCATTCCAGAAGAGATTGGAAACATCACTACTCTTCAAGAATTGGTCCTAGAATCCAGTCACCTCTCAGGAACCTTGCCTTCAACCCTTGGAAATTTGGTCAAATTGGAAAGATTACTTCTTGGCTCTAATAACTTCACTGGGGAGCTGCCGACGTCTTTGGGAATGCTAACCTCTTTGACCCAGTTCCGAATCAGCGACAATAACTTTGTAGGACAGATACCCAGTTTCATTCGGAATTGGGTAAATATTAGTCTAATAGTGATTCAAGGAAGTGGGTTGAGTGGGCCTATTCCTTCTGAAATCGGACTTTTGAATGAATTAATCGACATGAGAATAAGTGACCTGAATGGAGCTTCATCACCCTTTCCATCGCTTAATAATTTGACCAACATAAATTATCTAGTGTTGAGGAATTGCAATATTACTGGAGTGCTGCCTGATTATTTGGCGAAGATGACAACTTTGAGGATCCTAGACCTCAGCTTTAACAAAATAAGTGGGGAGATTCCACCCAATTTTCATGATCTTGCAGGGGTGCAAACAATATTTTTAACTGGAAACTTGCTAAATGGATCAGTGCCTGGATGGATGCTACATGATGGAGAGGTCATTGATCTCTCTTATAATAAATTTGCACCACTCCCTGCGGATACAAATTGTCAAACACGAAATATGAATTTCTTTGCAAGCTCTTCTCTTGACAATGATTCTAAGCTGGTATCTTGTTTGAGGAAAATCACATGTGGACAAGTTAAGTACCATATCTATATAAATTGTGGTGGTAAGGAAGAAATCATCAATGGTGTTACGTTTGAAGGAGATGAAGATACAGGCAAACCATCGCAGTTTCGTTTAAGCCAAACAAATTGGGCATTTAGCAATACTGGCTCTTTTTTGGATAATCATCACCGTACATATGACTATATTGCCGTCAATTCATCAACGTTGTCTATGAAAAATTCTAAACTGTATGAGACTGCTCGACTTACTCCACTGTCTCTGACATACTATGTGTACTGCCTAGCAAGTTCAAACTACACGATAAGCCTCCATTTTGCAGAAATAACATTTACTAATGATAAAAGTTTTACGAGCCTCGGAAGACGTGTATTTGATGTTTATGTCCAGGGAAGGCGGGTGCTGAAGGATTTTAATATTGTAGATGCTGCAGGTGGTGTTGGTAAAGCTTTCATACACAAAATTCCGATCTCTGTTACTAATGGCACTTTGGAGATACGATTTTATTGGGCAGGGAAGGGGACAACTGTAATCCCTTCAGGGGGAGTCTATGGTCCTTTGATTTCTGCCATTTCAATAGTTTCGGACTCTGATCCTTCAGTTGAGCCTCTAGTAGAAATTCGAAATAACTTATCTATCGGTGCAATTGTTGGAATTTCGGCTGCAATAGTCTTATTTATAATTTTGGCTCTTGGAACTTTATGGTCGAGAGGATGTCTTGGAAGGAAAAGTAGACATCCACAAGATTTGGAAGGTCTAAATATTGGTCCATTTTCTTTAAAGCAAATAACAACCGCGACGAATAACTTTGACACTTCCAATAAGATAGGGGAAGGTGGTTTTGGACCTGTTTATAAGGTGATATCACTGATTTGCTATTTTGTTTTGTTCGTGAACGTTTCTTTTGCAGATATCTTAGACCATATGCAACGTAAATTTTCTTTCAAAATGAAGGGTATCCTCTTAGATGGCACCATGATTGCAGTGAAGAAACTTTCCTCAAACTCAAAGCAAGGAAAACGTGAATTTGTGAATGAGATAGGCGTGATATCTTCTTTACAACATCCATATCTAGTAAAGCTGTATGGATGTTGCACTGAAGGACCTCAAGAATGTCAATTAGAATTGAATTGGCCAACGAGACAAAAAATTTGCATTGGTTTAGCCAAAGGTTTGGCTTTTCTTCATGAGGAGTCAGGATTGAAGATTGTTCACAGAGACATCAAAGGTAGTAATGTATTGTTAGATGAAAATCTCAATCCAAAGATATCTGACTTTGGTTTGGCCAAGCTTGATGAAGAAGAGAATACCCACATGACCACTCGGATCGCTGGAACATTCGGATATATGGCTCCAGAATATGCAACACGAGGCTACTTAACGGATAAAGCAGACATTTATAGCTTTGGTATTGTGACATTGGAAATAGTTAGTGGAAGGAGCAACGCTATGTATCGGTCAAAGGATAAGTGCCTTTATCTTCTTGATTGGGCACTTGTAGTGAAAGAGAAAGGCGATTTAATGGAACTAGTTGATCCAAGGTTAGGCTCCAATTTCGACCAAGGCGAGGCAATGGCAATGATCAACATTGCTCTTCTATGCACCAATGTCTCTCCTTCTGCTAGACCCACTATGACCTGCGTAGTGAGCATGCTTGAAGGTAAGGCTGCAGTCGAGGAATTATCCACAAATCCAAATGACTTGAGAGAAGAGATCAACGCAATGTGGACCATTATGCACCAGAACCAGAAATTGACTGACAATGACATCCAAACAGAGAGTGCATCGTCTTTGGACATTCTATGTACCAGTTCTTCCACATCCATTTAGACCACAAATTTGACTCATTTCTAATGTTTTGGATAAGGTATGTGGTATATCTAAGCTTTGATTTTTTCTCTCTCCTTTATAGGTTTGATACTATTTTGGTCTTAGTATTTTCGGTCTCAACTCGTCTCTGTGTTTTCAAAAGGTTCATTTTAGTTCATGTACTTTCAATTATTTTTCATTTTAATCCATGTTCAAAATATCGGTCTTGGTCCCATACTTTAAAAAAATTGACCATTTTTATCCATGTGTTGCAAAATCTTAACACATCTTTTATGCACGACTGAATGGACTAGAATGATCACTTTCTAAAGGTGTAAGGACTGAAACAAACGTTTTGAAAGTACAATAACTAAAATAAGCAAAAGTTGAAAGTATAAGAATCAAAATTGATGTTTTGAAATTATATAGAGACTAAAAAGAACTAGAGAATAAATGACCAAAATAATATTTAAACGTATTACGATGGAAGCTTAGACATACATGTACCATATTCAAGACATTGTAAATGCAGTTTCAGAGTCCAGTTTCTACTCTAAATTGATGTCAAAGAATTGATACCACTTAAAATATAGGAGAGATTAAATCTTCTTCTACTTGATTCTAGTAGAATATGTTTATAAGATCTGCAAGCTACAGTTTCTCAACAAGGCAACTCTTGGTTCCTGTTTACCAGGTGGGATCCTCCAAAGGCCATGCTATTATTATTGGCTTTAATTTTGTAGAATCCATAGTTCTGGTGTGTAAAAGCATTCCTTAAAATTGCTATCTACTTTTTCTGTCTTTATTAATAAGAGGTGTATCTAATATTACAATC 3853 37.97 MSFIVPSILVVPFFIVFFFLTILAFQVPQLPPDEVEGLKYVGKILGIDWNLSANPCSPEFAWVPADHQNDLSAISNITCNCEYLNHTVCHVTHIVLQSLNLGGTLPSDLSRLPYLKVLDLVRTYISGQIPPQWGSTKLCKISLLGNRLTGPIPEEIGNITTLQELVLESSHLSGTLPSTLGNLVKLERLLLGSNNFTGELPTSLGMLTSLTQFRISDNNFVGQIPSFIRNWVNISLIVIQGSGLSGPIPSEIGLLNELIDMRISDLNGASSPFPSLNNLTNINYLVLRNCNITGVLPDYLAKMTTLRILDLSFNKISGEIPPNFHDLAGVQTIFLTGNLLNGSVPGWMLHDGEVIDLSYNKFAPLPADTNCQTRNMNFFASSSLDNDSKLVSCLRKITCGQVKYHIYINCGGKEEIINGVTFEGDEDTGKPSQFRLSQTNWAFSNTGSFLDNHHRTYDYIAVNSSTLSMKNSKLYETARLTPLSLTYYVYCLASSNYTISLHFAEITFTNDKSFTSLGRRVFDVYVQGRRVLKDFNIVDAAGGVGKAFIHKIPISVTNGTLEIRFYWAGKGTTVIPSGGVYGPLISAISIVSDSDPSVEPLVEIRNNLSIGAIVGISAAIVLFIILALGTLWSRGCLGRKSRHPQDLEGLNIGPFSLKQITTATNNFDTSNKIGEGGFGPVYKVISLICYFVLFVNVSFADILDHMQRKFSFKMKGILLDGTMIAVKKLSSNSKQGKREFVNEIGVISSLQHPYLVKLYGCCTEGPQECQLELNWPTRQKICIGLAKGLAFLHEESGLKIVHRDIKGSNVLLDENLNPKISDFGLAKLDEEENTHMTTRIAGTFGYMAPEYATRGYLTDKADIYSFGIVTLEIVSGRSNAMYRSKDKCLYLLDWALVVKEKGDLMELVDPRLGSNFDQGEAMAMINIALLCTNVSPSARPTMTCVVSMLEGKAAVEELSTNPNDLREEINAMWTIMHQNQKLTDNDIQTESASSLDILCTSSSTSI 1006
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 89335314 89349624 + XM_039040538.1 Bhi09g03559 46176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03559 1006 Gene3D - 402 594 - -
Bhi09g03559 1006 Gene3D Ribonuclease Inhibitor 161 230 IPR032675 -
Bhi09g03559 1006 Gene3D Ribonuclease Inhibitor 48 160 IPR032675 -
Bhi09g03559 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Bhi09g03559 1006 SUPERFAMILY Protein kinase-like (PK-like) 652 976 IPR011009 -
Bhi09g03559 1006 ProSiteProfiles Protein kinase domain profile. 667 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03559 1006 SMART serkin_6 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03559 1006 Gene3D Phosphorylase Kinase; domain 1 696 766 - -
Bhi09g03559 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 79 293 - -
Bhi09g03559 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 383 683 - -
Bhi09g03559 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 770 983 - -
Bhi09g03559 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 293 346 - -
Bhi09g03559 1006 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 716 766 - -
Bhi09g03559 1006 Pfam Protein kinase domain 720 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi09g03559 1006 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515
Bhi09g03559 1006 Gene3D Phosphorylase Kinase; domain 1 638 693 - -
Bhi09g03559 1006 Pfam Malectin domain 406 588 IPR021720 -
Bhi09g03559 1006 SUPERFAMILY L domain-like 85 362 - -
Bhi09g03559 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 293 346 - -
Bhi09g03559 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 383 683 - -
Bhi09g03559 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 770 983 - -
Bhi09g03559 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 716 766 - -
Bhi09g03559 1006 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 79 293 - -
Bhi09g03559 1006 Gene3D Transferase(Phosphotransferase) domain 1 767 972 - -
Bhi09g03559 1006 Gene3D Ribonuclease Inhibitor 231 401 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03557 Bhi-Chr9:89335314 Bhi09g03559 Bhi-Chr9:89335314 0 dispersed
Bhi09g03559 Bhi-Chr9:89335314 Bhi09g03561 Bhi-Chr9:89335314 0 dispersed
Bhi09g03558 Bhi-Chr9:89335314 Bhi09g03559 Bhi-Chr9:89335314 0 tandem
Bhi09g03559 Bhi-Chr9:89335314 Bhi09g03560 Bhi-Chr9:89335314 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88204 PF00069 Pkinase 6.20E-29 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03559 - - bhj:120084723 1968.36