Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03574 TCATTCTCCAATCTCCCCATTTCAAAATTTTACCCAAAAAATTTCCACTTTTTTTCAGTTCGCGGGAACTCTGAATTCGAAAACCCTAACCCAAATTCTTACTAAAATGAGATTCGTCCCCAAATTTCCAACCCCATTCATTCACCTTCTTCTTCCTTGTTCGATTGTCGAAACCCCAACTCGAAGTTGCAGAGCAAAATGGATTCCCTCCATGGCTTACCTCCTCTCAAAAGGCTCAGAATCCTTCAAAAACAGGAAGAAAATCGGCAAAACGAGGATCAATCGCTTGATTCTTGTTCCCTCCCAGCGAAGAAGCGAAAGGAGTCTCGTGATTCTTCATTACTACTCATCCCTGAGGCTTCTCCTTACTGCTTGCCCACCAAGAAACGAGTGTGGGCTCTTCACCCTGATTTTCCCCCCGAGTCATTGGATCTCAATGTTGAATACAAGCCTTCTTTGGAGGAAGAATCGATATCGAAAACAGAACTAGAGATAGAGAAAAAGGAGAAGGAAGAGGATAAGGAAAGGGAGGTTTCTGATGTTGAAATGGAGATTCAAGCGACTGAAACAATCCAAGATGAAGAGGAAGATGATGGGATTCTCTGTGCGATTTGTCAAAGCACGGATGGGGATCCTTCAGATCCAATTGTGTTCTGCGATGGATGTGATTTGATGGTACACGCTTCATGTTATGGTAATCCTCTTGTGAAGAATGTACCAGAAGGAGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCCAAAACAGAGAAGAAGGTTTCAGAAACTCCATTTTCATGCTGTCTCTGTCCTCTGAAAGGAGGGGCTATGAAGCCGACGAACGATGGTCGATGGGCTCATATTGTTTGTGGGCTCTATGTTCCTGAGGTGTTCTTTGAGGACCCAGATGGGAGAGAAAGGATTGATTGCTCGAAGATTTTGAAGAGGAGATGGAATTCCAAATGTTATATCTGCAAAACTTCTAGAGGTTGTGCTATTGACTGCTCAGAGCCTAAATGCAGTTTGGCTTTTCATGTTACTTGTGGGTTGAAGGAGGATCTTTGTATTGAATATCAAGAAGGAAGAAGATCTGGTGCTATTGTAGCTGGGTTCTGCAGAAACCATACAGACTTGTGGAAGAAGCAACAACTAACAGGGAAATTCAAGATTGTGGCTAGAGATGAAGGTAAGTTGTAGTTGCTGCACATAGCTGCTGAGAAATCAGCAAATCAGCTTGCTCTAAATTTAGGATTCAATGTTTAGATAATTATTTCAGTTAATGTTTTCTGTCTGTGTAATTTTGTTGTTAGAAGTAATAAACTAGTATTGTAATTCCTTTTATCATAGAATCCCTATCAGGAGTTGTTGAATAGTTGGGTCAAATCAATATGATTGTTGTAGAA 1406 41.11 MDSLHGLPPLKRLRILQKQEENRQNEDQSLDSCSLPAKKRKESRDSSLLLIPEASPYCLPTKKRVWALHPDFPPESLDLNVEYKPSLEEESISKTELEIEKKEKEEDKEREVSDVEMEIQATETIQDEEEDDGILCAICQSTDGDPSDPIVFCDGCDLMVHASCYGNPLVKNVPEGDWFCIQCLASSSSKTEKKVSETPFSCCLCPLKGGAMKPTNDGRWAHIVCGLYVPEVFFEDPDGRERIDCSKILKRRWNSKCYICKTSRGCAIDCSEPKCSLAFHVTCGLKEDLCIEYQEGRRSGAIVAGFCRNHTDLWKKQQLTGKFKIVARDEGKL 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 89649725 89652218 + XM_039041399.1 Bhi09g03574 46191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03574 333 Pfam PHD-zinc-finger like domain 201 298 - -
Bhi09g03574 333 MobiDBLite consensus disorder prediction 14 46 - -
Bhi09g03574 333 PANTHER PHD FINGER PROTEINS 97 329 - -
Bhi09g03574 333 PANTHER PHD FINGER PROTEINS 3 94 - -
Bhi09g03574 333 ProSiteProfiles Extended PHD (ePHD) domain profile. 199 311 IPR034732 -
Bhi09g03574 333 Coils Coil 87 114 - -
Bhi09g03574 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 191 IPR013083 -
Bhi09g03574 333 ProSiteProfiles Zinc finger PHD-type profile. 133 186 IPR019787 -
Bhi09g03574 333 MobiDBLite consensus disorder prediction 1 46 - -
Bhi09g03574 333 SMART PHD_3 256 311 IPR001965 -
Bhi09g03574 333 SMART PHD_3 135 184 IPR001965 -
Bhi09g03574 333 SUPERFAMILY FYVE/PHD zinc finger 124 191 IPR011011 -
Bhi09g03574 333 CDD PHD_BRPF_JADE_like 135 183 - -
Bhi09g03574 333 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 3 94 - -
Bhi09g03574 333 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 97 329 - -
Bhi09g03574 333 Pfam PHD-finger 136 184 IPR019787 -
Bhi09g03574 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 313 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03574 Bhi-Chr9:89649725 Bhi04g02083 Bhi-Chr4:56170512 1.15E-23 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2040 PF13832 zf-HC5HC2H_2 2.70E-29 CL0390 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03574 K11380 - csv:101203744 612.838