Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi09g03574 | TCATTCTCCAATCTCCCCATTTCAAAATTTTACCCAAAAAATTTCCACTTTTTTTCAGTTCGCGGGAACTCTGAATTCGAAAACCCTAACCCAAATTCTTACTAAAATGAGATTCGTCCCCAAATTTCCAACCCCATTCATTCACCTTCTTCTTCCTTGTTCGATTGTCGAAACCCCAACTCGAAGTTGCAGAGCAAAATGGATTCCCTCCATGGCTTACCTCCTCTCAAAAGGCTCAGAATCCTTCAAAAACAGGAAGAAAATCGGCAAAACGAGGATCAATCGCTTGATTCTTGTTCCCTCCCAGCGAAGAAGCGAAAGGAGTCTCGTGATTCTTCATTACTACTCATCCCTGAGGCTTCTCCTTACTGCTTGCCCACCAAGAAACGAGTGTGGGCTCTTCACCCTGATTTTCCCCCCGAGTCATTGGATCTCAATGTTGAATACAAGCCTTCTTTGGAGGAAGAATCGATATCGAAAACAGAACTAGAGATAGAGAAAAAGGAGAAGGAAGAGGATAAGGAAAGGGAGGTTTCTGATGTTGAAATGGAGATTCAAGCGACTGAAACAATCCAAGATGAAGAGGAAGATGATGGGATTCTCTGTGCGATTTGTCAAAGCACGGATGGGGATCCTTCAGATCCAATTGTGTTCTGCGATGGATGTGATTTGATGGTACACGCTTCATGTTATGGTAATCCTCTTGTGAAGAATGTACCAGAAGGAGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCCAAAACAGAGAAGAAGGTTTCAGAAACTCCATTTTCATGCTGTCTCTGTCCTCTGAAAGGAGGGGCTATGAAGCCGACGAACGATGGTCGATGGGCTCATATTGTTTGTGGGCTCTATGTTCCTGAGGTGTTCTTTGAGGACCCAGATGGGAGAGAAAGGATTGATTGCTCGAAGATTTTGAAGAGGAGATGGAATTCCAAATGTTATATCTGCAAAACTTCTAGAGGTTGTGCTATTGACTGCTCAGAGCCTAAATGCAGTTTGGCTTTTCATGTTACTTGTGGGTTGAAGGAGGATCTTTGTATTGAATATCAAGAAGGAAGAAGATCTGGTGCTATTGTAGCTGGGTTCTGCAGAAACCATACAGACTTGTGGAAGAAGCAACAACTAACAGGGAAATTCAAGATTGTGGCTAGAGATGAAGGTAAGTTGTAGTTGCTGCACATAGCTGCTGAGAAATCAGCAAATCAGCTTGCTCTAAATTTAGGATTCAATGTTTAGATAATTATTTCAGTTAATGTTTTCTGTCTGTGTAATTTTGTTGTTAGAAGTAATAAACTAGTATTGTAATTCCTTTTATCATAGAATCCCTATCAGGAGTTGTTGAATAGTTGGGTCAAATCAATATGATTGTTGTAGAA | 1406 | 41.11 | MDSLHGLPPLKRLRILQKQEENRQNEDQSLDSCSLPAKKRKESRDSSLLLIPEASPYCLPTKKRVWALHPDFPPESLDLNVEYKPSLEEESISKTELEIEKKEKEEDKEREVSDVEMEIQATETIQDEEEDDGILCAICQSTDGDPSDPIVFCDGCDLMVHASCYGNPLVKNVPEGDWFCIQCLASSSSKTEKKVSETPFSCCLCPLKGGAMKPTNDGRWAHIVCGLYVPEVFFEDPDGRERIDCSKILKRRWNSKCYICKTSRGCAIDCSEPKCSLAFHVTCGLKEDLCIEYQEGRRSGAIVAGFCRNHTDLWKKQQLTGKFKIVARDEGKL | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 89649725 | 89652218 | + | XM_039041399.1 | Bhi09g03574 | 46191 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi09g03574 | 333 | Pfam | PHD-zinc-finger like domain | 201 | 298 | - | - | |
Bhi09g03574 | 333 | MobiDBLite | consensus disorder prediction | 14 | 46 | - | - | |
Bhi09g03574 | 333 | PANTHER | PHD FINGER PROTEINS | 97 | 329 | - | - | |
Bhi09g03574 | 333 | PANTHER | PHD FINGER PROTEINS | 3 | 94 | - | - | |
Bhi09g03574 | 333 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 199 | 311 | IPR034732 | - | |
Bhi09g03574 | 333 | Coils | Coil | 87 | 114 | - | - | |
Bhi09g03574 | 333 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 120 | 191 | IPR013083 | - | |
Bhi09g03574 | 333 | ProSiteProfiles | Zinc finger PHD-type profile. | 133 | 186 | IPR019787 | - | |
Bhi09g03574 | 333 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Bhi09g03574 | 333 | SMART | PHD_3 | 256 | 311 | IPR001965 | - | |
Bhi09g03574 | 333 | SMART | PHD_3 | 135 | 184 | IPR001965 | - | |
Bhi09g03574 | 333 | SUPERFAMILY | FYVE/PHD zinc finger | 124 | 191 | IPR011011 | - | |
Bhi09g03574 | 333 | CDD | PHD_BRPF_JADE_like | 135 | 183 | - | - | |
Bhi09g03574 | 333 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 3 | 94 | - | - | |
Bhi09g03574 | 333 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 97 | 329 | - | - | |
Bhi09g03574 | 333 | Pfam | PHD-finger | 136 | 184 | IPR019787 | - | |
Bhi09g03574 | 333 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 195 | 313 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi09g03574 | Bhi-Chr9:89649725 | Bhi04g02083 | Bhi-Chr4:56170512 | 1.15E-23 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2040 | PF13832 | zf-HC5HC2H_2 | 2.70E-29 | CL0390 | Bhi | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi09g03574 | K11380 | - | csv:101203744 | 612.838 |