Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g03581 CAATCATCTTCTTCCACACCACAAGATCAAAGCTCAATCACGAACTTCAAATCACAACCGGTCATTCGAATTGCGTACCGTACAGATCGAACCACCAGATGAAAACCCATTCCTAGCGCCATCGGAACATTGCACCAACCGTTAACAGCCGTCAGAAGGAAGCTGCGTTTCCCTTTATCGAACAACCTGAGAGAGAAGGAGAGACCATTCTCTGTGAGAGTAAAATATTTGGTTCGAGAGACGAAAAGGGTCGAAGAGTGGGAATGGAGTTTCGTCCTTGATGGGTTGTTTTTGGTAAAATAAAGGAACCCTTTTGAGTTTGTGGGTTCAAAGAGTGAGAATCATGGGTAGCGAAGTGAATGAAAGCGAGGAATACTCGCTGCTCAAGAATCTGAGGCTGGAAATTGATGTAGATGATGGCTGTTTTACTGTTTGCTTTTGGGTTTATCTCATGAATTCTACCACATTCCCTATTTCAATCCTTCAGCAGGAGCAATTAGATTCCTCAGGCATGACTCCTTTTCTCATTTTAAGTGAAAGGAATAGACTGAAGATTATGCCTTTGAACACCTTACACAAAGCTGATGAAGATTCCAGCCCTGGTAGTTCTTCTTCCGGGGATGTAGTTCCACATGAATATCTAGACATCGATTTTCCCATGGAAAAATGGGTTCACATTGGATGTGAGGTATCCACCGATTTTGTCAGGCTGCATATTGATGGGAAAATGGTTGGAGAAAAGGCTATATCGTCTTCACTCAGTGAAGACACCCTTCCAAGGGGTTTGCGGAGGATTATTTTAGGCAATAATGGTGAAGACAACAGCATGCAGGGCTATGTTCATAATGCAAAAATCTTGCCTTCAGTTTCGTCGATCAGGGATCATTATGCTGAGGACCTACCTGTTAAATTATTTATCGACAACTCTTCCACCATGGAGATTGAAGAGGGCAGTGATGGCATCTGGAATATAGTTGGTGGCAAGCCATCTTGTCGTAGAAATTTTTCATTGGATGTCATGCTGTTAGATTCCTCTGGCCATCCTGTTCTGAAGGAACTCGAGGTTGTTGCCTCCCTCATCTATGCTGAAAGTGGGGAAGCTGTGGAGAAGTCGTGTGATGAAGAAGCTCCCCTTTTGGCAAGCTATGATGGTGTTGAATTTGCTTCTAGTGATAGACCAAGCAAACTGTTGCACGGGCGTGCCTCCTTTAAGTTAAAAATATCTCAGCTATCTTCTAAATGTGATAACAAGCTCTTCCGCATCAGATTTTGTATACCTAGAGTTGAGGGGTATCCCTTCTTCGAGGCTCTCTCTTCTCCAATTCGGTGTATCTCAAGGAGTCGAAATACTCGTATGTCAACTTTGATGTTGAAAAGATCTACCTTCCATCCACTCGATGGATCTAGGTCATCTGGTTTGGACAATGGAACCTCAGAACATGAGTATGTTTCAGTAGATGAAGAAAAACCAAGTCCACTATTGAAGAGGATTAAGTTGGGACAAGATAAACCAACCCCTAATGATGATCCTTCATCAGGGCAAGCAGATGAGGAATGCAATTCTCATTCTTTTACTGCTAATGGGGCTGAAAATGGATTTGGCACAAGTTTAACTGGAAGACCAAAAAATAATGGATCAACAGGAGCCTCCCCATCAGACTCCGGGAGCACTGAAGCCAGGCATTCAGCTCTAAATAGAACTACAACCAATGAAAATCCAATATCAGATGTGAACATTTTCAAATATTGCCTAGCAGGTTTATCTGAGAGGTCACTTCTGCTCAAGGAGATTGCAACCTCTGTGTCACAGGAAGAAATTTTGGAATTTGCCGAGCATGTTTCCCTATATTCTGGATGCGTGCACCACAGGCATCAAATATTAATGTCGAAAAAATTAATAGAGGAGGGAACACAAGCTTGGAGCTCAATCTCACAAAACAAGCATCATGTTCATTGGGAGAATGTTGGTTTTGAAATTGAAGAGCAATTCATGAGAATTGCTGGCTGCAGCTCTAGATCTCTCACTCAGCAGGATTTTGAGTTGCTGAGAAGAATTTCTGGTTGTCAAGAGTATCTGGCCCAAGAGAACTTCGAAAGAATGTGGTGTTGGTTATATCCTGTAGCTTTTACTCTATCCAGACAGTGGATAAATGCAATGTGGAGTTCTTTATCACCTAAGTGGATTGAAGGATTCATTACCAAAGAAGAAGCTGAATTATCACTTCAAAGTCCGACAGGTCTTCAAGATCCTGGGACGTTTATTCTTCGATTTCCCACCTCAAGAAGCTGGCCTCATCCTGATGCTGGTAGCTTGGTAGTTACCTATGTCGGCAATGATTATGCTCTTCATCACAGACTTCTTACCCTTGATCGCATTTTCAGTTCTGCTGAAGGGGAGAAGAGTATGAGAAGTCTTCAGGACATGCTTCTAGCAGAACCCGAGCTATCTCGTTTGGGAAGGAGTTGTTTGGGAAAGAATATTTATAGGCATGTTGGAGCCATTCCAGAACCAAGATTTGAAAGGTGAACCATTCAGTCATCATCTTCATATACTCTTCCTCTCTTCAGAACATTACTCACAAAAAACTACAAGTTGTAGATGAAACTTCGTCTCAGTTGCACTTGTATGAGAACGTGCACGTCAGATACGATTATATCATATTACCATCTCCAGTCAGGATATCTCATCCGTCAGCAGTTTTAAAACCTTGAATTAGCAGGCAATCCTTGTGAGTTTTATTTTTCTCTTTTAGCCCCTAAATAGTATCTACTGTATAAGTTAAACTTGTTCTACCAAGAGTGATTCAAAATCTACCATTTTTTAGATGAAA 2831 41.79 MGSEVNESEEYSLLKNLRLEIDVDDGCFTVCFWVYLMNSTTFPISILQQEQLDSSGMTPFLILSERNRLKIMPLNTLHKADEDSSPGSSSSGDVVPHEYLDIDFPMEKWVHIGCEVSTDFVRLHIDGKMVGEKAISSSLSEDTLPRGLRRIILGNNGEDNSMQGYVHNAKILPSVSSIRDHYAEDLPVKLFIDNSSTMEIEEGSDGIWNIVGGKPSCRRNFSLDVMLLDSSGHPVLKELEVVASLIYAESGEAVEKSCDEEAPLLASYDGVEFASSDRPSKLLHGRASFKLKISQLSSKCDNKLFRIRFCIPRVEGYPFFEALSSPIRCISRSRNTRMSTLMLKRSTFHPLDGSRSSGLDNGTSEHEYVSVDEEKPSPLLKRIKLGQDKPTPNDDPSSGQADEECNSHSFTANGAENGFGTSLTGRPKNNGSTGASPSDSGSTEARHSALNRTTTNENPISDVNIFKYCLAGLSERSLLLKEIATSVSQEEILEFAEHVSLYSGCVHHRHQILMSKKLIEEGTQAWSSISQNKHHVHWENVGFEIEEQFMRIAGCSSRSLTQQDFELLRRISGCQEYLAQENFERMWCWLYPVAFTLSRQWINAMWSSLSPKWIEGFITKEEAELSLQSPTGLQDPGTFILRFPTSRSWPHPDAGSLVVTYVGNDYALHHRLLTLDRIFSSAEGEKSMRSLQDMLLAEPELSRLGRSCLGKNIYRHVGAIPEPRFER 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 89675192 89682420 + XM_039042378.1 Bhi09g03581 46198

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g03581 727 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 8 706 IPR001217 GO:0003700|GO:0006355|GO:0007165
Bhi09g03581 727 MobiDBLite consensus disorder prediction 350 364 - -
Bhi09g03581 727 MobiDBLite consensus disorder prediction 366 382 - -
Bhi09g03581 727 MobiDBLite consensus disorder prediction 349 456 - -
Bhi09g03581 727 SUPERFAMILY SH2 domain 605 695 IPR036860 -
Bhi09g03581 727 Gene3D - 4 186 - -
Bhi09g03581 727 Gene3D SH2 domain 599 713 IPR036860 -
Bhi09g03581 727 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 175 IPR013320 -
Bhi09g03581 727 ProSiteProfiles Src homology 2 (SH2) domain profile. 613 695 IPR000980 -
Bhi09g03581 727 MobiDBLite consensus disorder prediction 391 456 - -
Bhi09g03581 727 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 8 706 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g03581 - - - bhj:120086005 1458.35
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g03581 Bhi-Chr9:89675192 Bhi09g03583 Bhi-Chr9:89676787 0 dispersed
Bhi09g03581 Bhi-Chr9:89675192 Bhi09g03582 Bhi-Chr9:89675193 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g12 . . . . Bpe09g00273 . . Bma13g00915 . . Cma01g01277 . Car01g01092 . . . Cpe02g00648 Bhi09g03581 Tan01g4242 . . . . . . . . . . . . . . . . Lsi04g01968 Csa04g02247 . . . Blo10g00716 . Bda12g00798 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000795 3 6 3 2 3 0 4 0 0 2 2 0 4 3 2 4 0 2 4 0 3 2 1 1 2 3 1 1 2 5 65
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2041 None None None None Bhi TF