Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00042 AAACCCACATGGCAGAGAGAGAAATCCTGAAGGACAAGATTTTCCATATCTCTGAATTGAAGTTTCTCAAGTCTCAGATTATATTCAAACCACAAATTAGTTTAAAATAAAAGCTACATGATCAGCAGCCATCTAATAAGAATAAGCTGGTTTTCTTCATAGAGAAGGAGAGAAGAGACCCCATCAAAGATTCAAATTTTTAGTCCCCAAACACAGAAGATTATCTTTTGATTTGCAGAAGAAGAAGAAGAAGAATGGTTTGAAGAAGGAATTTGTGAATGGGGAGCCAAAGAGTTGAAGAAACTGTTCCTTCTTCAACCCATCATCATCATCATCATCTTCCATATAATTCACTTCTTTATGGAATCAACAACAATAATCTTTCCTCCACTTTGATCAATCATGATGGGCAATCTTTTGATTTTGGAGAATTGGAACAAGCAATTGTGCTACAAGGACTCGAAGCGAAGAACTATAAACTCGATCATCACGAACCTAAACAAAGCTTTTTCTCAGGCAAGCCTGCAGCAACTCTGGAAATGTTCCCTTCTTGGCCAATCAAATACCAACAAACTTCAAGAGGAATTAGTTTGAGAAGAAGAGAAGAGAGCACAGATGAGTCAGGATCAGCTGTGAACACTCATACAATAAGCAAATCTAACCATCATCATCATTATAATCAAGAGGGGGATTTGGAATTGGAAATAGAACAAGAAGAATCTGATCAGATGAGTAAAAAAGGTTGTTCTTCATCTTGTTCTTCAGGTCAAGATCAGTGCTTTATTCAGAAGCATCTACCGCTGGTTCAACCTGAACAAATGTTCACTGATATTTCAACAACTGCACTTTCATCTCAACATCAATCCCTTCAACAAAAGAGAAAAGGATGTGGTTCCATTTCAACATCACAGAAACAACTTGACGCTAAGACATTGAGACGTTTAGCTCAGAACAGAGAGGCTGCGAGGAAAAGTCGACTAAGAAAAAAGGCTTACGTACAGCAACTTGAGAGTAGTAGAATCAAGCTTACCCAGCTTGAGCAAGACCTTCACCGCGCACGATCTCAGGGTTTGTTTTTAGGTGCCTGCGGTACTGGCGGCGGCATTGTCAGCCCCGGAAGTGCAATGTTCGATATGGAATATGTAAGGTGGTTGGAAGAAGAGCATCGACACACAGTGGAGCTGCGTGGGGGATTGGAGGCATGTCTACCAGACGTGGAGCTGAGAGTGAGGGTAGACGCCTGCATTTCCCATTACGACCAAATTTTTCGATTGAAAGGAGAGGCTGCTAAGTCCGACATCTTCCATCTCATCACTGGAATCTGGATGTCTCCGGCCGAGCGTTGTTTCATCTGGATCGGTGGATTTCGACCCTCCGATCTCATCAAGATGTTAATGTCACAATTAGACCCCATAACAGAGCAACAAGTGATGGAGATTTACAAGCTACAACATTCGTCGCAACAGGCTGAAGATGCTTTATCTCAAGGCCTTGATCAGCTCCACCAGTCTTTGACCGATTCCGTCGCTGGTGGTCCCGTCATCGACGGCATCAACCACATGGTTTTGGCCATGGACAAGCTCTCTAGTCTCCAAGGCTTTCTCCATCAGGCAGATATTTTGAGACAACAAATGCTTCATCAACTACGTAGAATACTCACTATCCGACAAGCAGCGAGATGTTTTCTAGTAATTGGTGAATATTACAGTAGATTACGAGCCCTAAGCTCCCTATGGTCCTCTCGTCCAAAGGAGGGTGAAGATAATTCATGCCAAACAAGTACGCATCATCAAGGGCATATGGTTCAACCTTTGCACCATCGTTTCTCAAGCTTCTAATCATCTCATTAAATGGAAGCCTCTGATTTCCTCACCCCTCTTCTTCTCAATTGTTGAGGATTTTTTTTAATCAACTTTTACTACTACTTTTGGTTAATGTTAAATATCTCTTGGTATCAA 1958 41.73 MGSQRVEETVPSSTHHHHHHLPYNSLLYGINNNNLSSTLINHDGQSFDFGELEQAIVLQGLEAKNYKLDHHEPKQSFFSGKPAATLEMFPSWPIKYQQTSRGISLRRREESTDESGSAVNTHTISKSNHHHHYNQEGDLELEIEQEESDQMSKKGCSSSCSSGQDQCFIQKHLPLVQPEQMFTDISTTALSSQHQSLQQKRKGCGSISTSQKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLHRARSQGLFLGACGTGGGIVSPGSAMFDMEYVRWLEEEHRHTVELRGGLEACLPDVELRVRVDACISHYDQIFRLKGEAAKSDIFHLITGIWMSPAERCFIWIGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQHSSQQAEDALSQGLDQLHQSLTDSVAGGPVIDGINHMVLAMDKLSSLQGFLHQADILRQQMLHQLRRILTIRQAARCFLVIGEYYSRLRALSSLWSSRPKEGEDNSCQTSTHHQGHMVQPLHHRFSSF 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1156698 1165186 - XM_039044894.1 Bhi10g00042 46383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00042 519 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 220 235 IPR004827 GO:0003700|GO:0006355
Bhi10g00042 519 ProSiteProfiles DOG1 domain profile. 281 489 IPR025422 GO:0006351|GO:0043565
Bhi10g00042 519 MobiDBLite consensus disorder prediction 489 507 - -
Bhi10g00042 519 CDD bZIP_HBP1b-like 217 268 - -
Bhi10g00042 519 Pfam Seed dormancy control 300 374 IPR025422 GO:0006351|GO:0043565
Bhi10g00042 519 Pfam bZIP transcription factor 216 257 IPR004827 GO:0003700|GO:0006355
Bhi10g00042 519 MobiDBLite consensus disorder prediction 489 508 - -
Bhi10g00042 519 Gene3D - 216 265 - -
Bhi10g00042 519 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 215 259 IPR004827 GO:0003700|GO:0006355
Bhi10g00042 519 PANTHER TRANSCRIPTION FACTOR TGA9 74 499 - -
Bhi10g00042 519 PANTHER TRANSCRIPTION FACTOR TGA9 74 499 - -
Bhi10g00042 519 SMART brlzneu 213 272 IPR004827 GO:0003700|GO:0006355
Bhi10g00042 519 SUPERFAMILY Leucine zipper domain 217 259 IPR046347 GO:0003700|GO:0006355
Bhi10g00042 519 MobiDBLite consensus disorder prediction 100 130 - -
Bhi10g00042 519 Coils Coil 236 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00042 Bhi-Chr10:1156698 Bhi10g00044 Bhi-Chr10:1156698 0 dispersed
Bhi10g00041 Bhi-Chr10:1156698 Bhi10g00042 Bhi-Chr10:1156698 0 tandem
Bhi10g00042 Bhi-Chr10:1156698 Bhi10g00043 Bhi-Chr10:1156698 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2067 PF14144 DOG1 1.60E-26 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00042 K14431 - csv:101223216 682.174