Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00064 GGTAGGGACAGCGTCGCGGCATTTTTAATCGGAAGCACAGTTTCTGAAAACTCTCTATCGCCATCTCTCTTTTCGTCTTCTGTTTGTTTATCTGAAGAATTTTTGTGTTTCTCTGATCTTTTGGCGTTTGTTGGAGACCGGCGATTTGTATAATGAGCGGCGAAAGCCGACGGCGAGGCCGTACAGACAAGAGTAGTAGGTCGAAGAAGCAGAGAATAATCCGGTCAGCCGAGGAGGAGATCGAATCAAAGCTTGGATTTGATCTCTTCTCTGAAGGCGATAAGAGGCTTGGATGGTTGCTCACTTTCGCTCCTTCATCTTTGGAAGATCAGGATACTGGAAAGGTCAATAGTTGTATTGATCTTTATTTTGTGACACAGGATGGGAGCAGTTTCAAGTCAAAATATAAGTTTCGTCCTTATTTCTATATAGCCACAAAGGATAAAATGGAAATTGATGTGGAGGCATATTTGAGACGACGTTATGAAGGTCGAATAGCTGATATTGAAATTTTAGAAAAAGAAGACCTCGATCTTAAAAATCATCTGTCAGGATTGTGCAAGGCATATTTGAAACTATCATTTGACACTGTTCAAGAATTGATGAATTTGAAGAGTGAACTATTGCATGTTGTTGAAAGCAACTGGGCAAAGTCCGATGCTGCAGAAGCATATGATTCCATTTTATTTGGTAAAAGGGAACAAAAGCCTCAAGATTTTCTAGAATGCATTGTTGATCTTCGAGAGTATGATGTTCCTTACCATGTTCGCTTTGCTATTGATCATGATTTACGCTGCGGACAATGGTACGATGTTAGTGTATCAAGCACTGGTGTTACACTTGAGAAGAGAAAAGATCTTCTGCAACGTGCTGAAGTTCACATATGTGCATTTGATATTGAAACCACAAAGCTACCATTGAAATTCCCAGATGCTGAATATGACATGATAATGATGATTTCTTATATGGTTGATGGACAAGGGTACTTGATTATCAACAGAGAGTGTGTGGGAGAAGATATTGAGAATTTGGAGTACACTCCAAAACCAGAATATGAAGGGTTCTTTAAAGTGACCAATGTGAAAAATGAGTTAGAGCTTCTCAAACTGTGGTTTTCCCATATGCGAGAGGTGAAACCTGGTATCTATGTCACCTACAATGGTGATTTTTTTGACTGGCCATTCATTGAAAGCAGAGCAGCCTATCATGGCTTTAAAATGATTGATGAAGTAGGATTTCAATGCGACAAGAATCAGGGGGAATGCCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTGCCTGGGTAAAGCGTGATAGTTATCTTCCTCAGGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCTAAATTGGGGTATGATCCTCTTGAAGTGAATCCCGAGGATATGGTGCGGTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCTGTTTCAGATGCCGTTGCTACTTACTACTTGTACATGACCTATGTTCATCCTTTCATTTTTTCACTAGCAACCATTATTCCAATGTCACCAGATGAGGTGTTGCGCAAGGGAAGTGGGACACTTTGTGAAATGCTTCTAATGGTTCAGGCTTACAACGCTAATGTTGTGTGTCCTAACAAACATCAATCAGATCCAGAGAAGTTCTACAGCAACCGGCTTCTTGAAAGTGAGACATACATTGGTGGTCACGTAGAATGCCTAGAGAGTGGTGTATTTAGATCCGATCTTCCTACCAGTTTTAGGCTTGATCCATCTGCTTATGATCAATTGATATACAATTTGGATAGAGATCTGCAATATGCCATACAAGTAGAAGGAAAGATGGACTTGGAGTTGGTGTCAAATTATAGCGATGTGAAGAATGCTATCCTAGAAAAGCTTATTAGATTGCGGGACGAGCCTGTACGTGAAGAGGGCCCTCTGATATATCACCTTGATGTAGCTGCGATGTATCCTAATATTATTTTAACAAATAGACTGCAGCCACCATCAATAGTTACAGATGAGATTTGTACTGCTTGTGATTTCAATCGTCCTGGGAAGACTTGCCTACGAAAACTTGAGTGGGTTTGGCGTGGAGAGGTATTCATGGCTAAAAAAAGTGATTATTACCATCTGAAGAAGCAAATTGAGTCTGAGTTTGTTGATAGCGGTAATGTTCGGTTGTCAAAATCATTTCTTGAACTTCCAAAGTTGGAGCAGCAAGCAAAGCTCAAGGAGCGTTTAAAGAAATACTGTCAGAAGGCTTATAAACGAGTACTTGATAAGCCAGTCACTGAAGTTCGAGAAGCAGGGATCTGCATGAGAGAAAACTCTTTCTATATTGACACTGTTCGTAGTTTTCGAGATAGAAGGTACGAATACAAAGGGCTCAATAAAGTATGGAAGGGAAAATTATCGGAAGCTAAAGCGAGTGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTAGTTCTTTATGATTCTCTACAACTTGCTCATAAATGTATTCTCAACTCCTTTTATGGATATGTGATGCGAAAGGGTGCTCGATGGTACTCAATGGAAATGGCTGGGGTAGTTACATATACAGGAGCAAAAATCATTCAGAATGCTCGTCTGTTAATTGAGAAAATTGGAAAACCACTGGAGTTAGACACTGATGGTATCTGGTGTGCTCTACCTGGATCGTTCCCAGAGAACTTTACCTTCAAAACACGAGATTCGAAGAAGTTGACAATTTCATATCCATGTGTTATGCTTAATGTTGATGTGGCAAGGAACAACACGAATGACCAATACCAGACACTTATAGATCCTGTGAAGAAAACATATAAAACACACAGTGAATGCTCAATTGAATTTGAAGTAGATGGACCATATAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCTGTCTTCAATGATGATGGAACACTTGCAGAGCTAAAAGGCTTTGAGATCAAGCGTAGGGGGGAGTTAAAGCTCATCAAAGTTTTCCAGGCAGAACTTTTTGACAAGTTTCTTCATGGTTCCACCTTAGAAGAATGCTATTCAGTTGTTGCATCTGTTGCAAATCGATGGCTAGATCTTCTAGATAATCAAGGAAAAGATATTGCAGATAGCGAGTTGCTTGATTATATATCTGAATCAAGTACCATGAGCAAGTCTTTGGTAGACTATGGGGAGCAAAAGTCTTGCGCTGTTACCACTGCCAGACGTCTTGCAGATTTTCTTGGTGATACAATGGTCAAGGATAAAGGCCTACGTTGTCAATATATAGTTGCATGTGAACCTAAGGGTACTCCTGTAAGTGAGCGTGCTGTTCCAGTTGCAATCTTTGAGACTGATGCAGAGATAATGAAATTTTATGTACGTAAATGGTGCAAGATTTCATCTGAAGTCGGCATCCGATCCATCATTGACTGGTCCTACTACAAGCAACGCTTAAGCTCAGCCATTCAAAAAATTATAACAATTCCAGCAGCCATGCAAAAGGTTGCAAATCCTGTTCCTAGGGTGGTCCATCCTGATTGGTTACATAAGAAAGTTCGTGAGAAGGATGATAAATTTCGCCAACAGAAAGTAGCTGATATGTTTGCATCCTCAAACAGAGTTAAATATTCTAAGAAGAATAGTGATGTTAGCTGCAGCAAACATGCTATGAATGAAGATAATTCTGAAGATTTAGAAGATTTTCAAAAGAAAACAAGTCCTAGAAATGGCCCCAAACCAGTTGTCCGATGTTATGATGTCAGAGGCATGAAACATTCACTTACAAGCAATAGCGAAATAAACTCCGAGATGCAGGAGAATTTTAATGATGGAGGATGTGAGCCTTCTTCACCCTTGCATGTTGAAAACATAGACAAGAATGTAGATTACAGTGGATGGCTTGAAATGAAGAAGCGAAAATGGAAGGATACTTTGGACAAGAGAAAAAAGCAAAGGTTGGTAAGTTTAAGGACTCCACTTGCTGCTAATAATGTTATGCGGGAGTTAAACGATGCTACGAATAATAAAGAGGCTTCTAGAACAGGTGTTGGTTCATATTTTAAGAGGCATGAAGGATCTGTAACACGCTGCCATTGGCAGATTTTACAGCTTGTTCATAGTACACAGAGTGGGCAATATTTTGCTTGGGCTGTTGTCGGAGGAGTTATGCTAAAGATCCCTATTAATGTTCCTAGAGTTTTTTACCTTAATTCTAAAGTACCTATTACAGATGAATTTGTGGGGAGGCGTGTTAATAAAATTCTTCCCCATGGAAGGCACAGTTATAACCTGTATGAGGTTGTGACTGATGAGAGTCAATATAGGACACAGAAGAATAAACTTGCTGCCCTACTTGCAGATCCAGAAGTAGAGGGAATCTATGAAAGCAAGGTACCATTAAAGTTCAAGTCCATCTTTCAGATTGGCTGCGTCTGTAGAGTTGATAAAACTGCCAAAAAACGAAACATTCAAGACGGATGGAGTCTGGATGAACTGCAAATGAAGACTACAACAGAATGCAGTTATCTGGAAAAGTCAATCTCTTTCTTCTATGTGTATCACAGCATTTCTGAAGGAAGAGCTATCTACATTACCTTTTTTCCCTCCACAAGATCAATATTCGTGGTGGTGGTTAATCCTTACCAAAACAAAGACCTGTCATCAACTTTTCTTGAAAAGCAATTTCGTGATGCTTGTCAAATGCTGTCTGATGAATCACAACCTCCTAAGAGTGGCGTAACTTATAAGGTTGACTATGTTGTTAACATCAAAGAAGCTGAAGTGATTTTGCAAAGATCGATAACAGAGCACAGGAGCATAAACCATGGACCTATTCTAGCTGTAATTCAATGTCCAAATGTACAACGGCTGAAGTCAGGTGTAGGAGTGTTAGATGATTTTCCATGCGTGACCATTCCTTCTAATGCTCGTGATAACCAATATCAGGTTCTTGGTTGGCAACAAACAGCTGCAAAGATTGGCATGCAACGTTGTGCTGCATCATCCCAATGGTTGCATGAGAGAATCTCTCTTGCAAGATATGCCCATGTTCCATTAGGAAATTTTGAACTTGATTGGCTAATTTTTACAGCAGATATATTTTTTTCAAGAGCATTACATGATCAACAGCAGGTACTTTGGATATCGGATGATGGCGTTCCAGATATAGGAGGCATTAACATAGAAGATGTGTGTTTTGCTGATGAGGTCCAACAGCCTATTCGGACGTACCCTGGAGCATATAGAAAAGTTTCTGTGGAGCTTAAGATCCATCATTTGGCTGTCAACGCTCTGTTGAAGAGCAACCAAGTGAATGAAATGGAAGGAGGTAGTTTGTTTGGCTTTGAACGTGATATGCAATGTGGGTCCCAGCTTTCTAATGAAGAAGGTGCCTTCGATGAGGCTGCTTCATGTGCTCCGGCATTTCGTGTCCTGAAACAATTGATACAAAGGTGTCTTGCAGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATTTTGCGGCATCTGTACAGATGGATTTGCAGCCCCCAATCAAAACTTCACGACCCAGCCCTTCATCGTTTGCACCACAAGGTTATGCAAAAGGTGTTTGCTCTTTTGTTGGCTGAGTTGCGCAAATTAGGTGCCACCATTATATTTGCAAACTTCTCAAGAATTATTATAGACACGGGAAGGTTTGATCTCTCTTCTGCTAAAGCATACTGTGATAGCTTGCTGAAAACTGTACAAACAAGGGATCTGTTCGAGTGGATTGAGCTGGAACCATTACAGTTCTGGTACTCCCTGTTATTTATGGATCAGTATAACTATGGTGGAATCCCGGCAAAAGATGATGAGAGCACAGATATTGAATCTCAAGTTGATATAGTGGCCAACTGGAACATTGCCGAGTATCTACCCAAGAAGATTCAGGATCACTTTGTTTTTATCATCTCCCAGTTTTTGTATATTCCATGGAATTATGCAACCAAGCAAGCTGCAGCAAGAGCATCATTGTATGGTGATGACACATGTACCCCATCCATTACTGTTGGAGCTGCTGAATCGTTTGAATCTCATGTGACAGAAAATCTGAAAGAACAGTGACAAAATGTTGGGAATTGTTCGTGACATTGTTCTTCATATGAAAGGAAAGGACAAGAACACCCAGGATATTTTACCAGAACAACCTTCTGGTAATATCCACAAAGGAGATGCTGCATTGGAATTCATTAAGCTCGTC 6243 40.24 MSGESRRRGRTDKSSRSKKQRIIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQDTGKVNSCIDLYFVTQDGSSFKSKYKFRPYFYIATKDKMEIDVEAYLRRRYEGRIADIEILEKEDLDLKNHLSGLCKAYLKLSFDTVQELMNLKSELLHVVESNWAKSDAAEAYDSILFGKREQKPQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGQGYLIINRECVGEDIENLEYTPKPEYEGFFKVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFIESRAAYHGFKMIDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYNANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIYNLDRDLQYAIQVEGKMDLELVSNYSDVKNAILEKLIRLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGNVRLSKSFLELPKLEQQAKLKERLKKYCQKAYKRVLDKPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTRDSKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKTYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKDDKFRQQKVADMFASSNRVKYSKKNSDVSCSKHAMNEDNSEDLEDFQKKTSPRNGPKPVVRCYDVRGMKHSLTSNSEINSEMQENFNDGGCEPSSPLHVENIDKNVDYSGWLEMKKRKWKDTLDKRKKQRLVSLRTPLAANNVMRELNDATNNKEASRTGVGSYFKRHEGSVTRCHWQILQLVHSTQSGQYFAWAVVGGVMLKIPINVPRVFYLNSKVPITDEFVGRRVNKILPHGRHSYNLYEVVTDESQYRTQKNKLAALLADPEVEGIYESKVPLKFKSIFQIGCVCRVDKTAKKRNIQDGWSLDELQMKTTTECSYLEKSISFFYVYHSISEGRAIYITFFPSTRSIFVVVVNPYQNKDLSSTFLEKQFRDACQMLSDESQPPKSGVTYKVDYVVNIKEAEVILQRSITEHRSINHGPILAVIQCPNVQRLKSGVGVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLHERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPIRTYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGGSLFGFERDMQCGSQLSNEEGAFDEAASCAPAFRVLKQLIQRCLADAVTSGNVYADAILRHLYRWICSPQSKLHDPALHRLHHKVMQKVFALLLAELRKLGATIIFANFSRIIIDTGRFDLSSAKAYCDSLLKTVQTRDLFEWIELEPLQFWYSLLFMDQYNYGGIPAKDDESTDIESQVDIVANWNIAEYLPKKIQDHFVFIISQFLYIPWNYATKQAAARASLYGDDTCTPSITVGAAESFESHVTENLKEQ 1984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1579328 1625709 - XM_039045187.1 Bhi10g00064 46405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00064 1984 Gene3D - 941 1125 IPR042087 -
Bhi10g00064 1984 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 31 1984 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bhi10g00064 1984 SUPERFAMILY Ribonuclease H-like 60 468 IPR012337 -
Bhi10g00064 1984 Gene3D Palm domain of DNA polymerase 753 937 IPR023211 -
Bhi10g00064 1984 SMART DUF1744_2 1511 1896 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bhi10g00064 1984 Gene3D - 239 469 IPR036397 GO:0003676
Bhi10g00064 1984 SUPERFAMILY DNA/RNA polymerases 487 1115 IPR043502 -
Bhi10g00064 1984 SMART polmehr3 240 843 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bhi10g00064 1984 Pfam DNA polymerase family B 756 1070 IPR006134 GO:0000166|GO:0003677
Bhi10g00064 1984 MobiDBLite consensus disorder prediction 1168 1194 - -
Bhi10g00064 1984 CDD DNA_polB_epsilon_exo 241 445 - -
Bhi10g00064 1984 MobiDBLite consensus disorder prediction 1168 1202 - -
Bhi10g00064 1984 MobiDBLite consensus disorder prediction 1 22 - -
Bhi10g00064 1984 CDD POLBc_epsilon 504 1122 - -
Bhi10g00064 1984 Gene3D DNA Polymerase, chain B, domain 1 57 234 - -
Bhi10g00064 1984 Pfam DNA polymerase family B, exonuclease domain 75 401 IPR006133 -
Bhi10g00064 1984 Pfam Domain of unknown function (DUF1744) 1523 1896 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00062 Bhi-Chr10:1577136 Bhi10g00064 Bhi-Chr10:1579328 0 dispersed
Bhi10g00063 Bhi-Chr10:1577136 Bhi10g00064 Bhi-Chr10:1579328 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00064 K02324 - csv:101208568 3829.64