Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00144 TTCTTATTCAGATTCCGACACAGTTCGATCAAATTTAACAATTACAGTCCGATCAAAACCCAAAACCCAAAATCCAAAGCCCTTCCCGCCATTTCTCAGTTCTTCTTCCCTTCCGCTCCTGCTCTGTTCTTCTCTCTCTGAAATACTTTATTCCCCTTTTCATTACCTACAATTGATGCTTTCACTGCGTTCATGTTATTATCTACGCCCCATCACATTGCCTCATCCCCAATTCAAGAAACTCATCTTCTTCAACAAACCTCCCTCTTTCAAACCCATTTTTCAGAATTTTGTTTCATCAATGTCTTCTCGTCCTTCTGCATTCGATGCTCTCATGTCTGGTGCTCGGGCCGCTGCCAAGAAGAAGCCCGTTAATTCTTCTCCCAAGAAGCGTAAAGCCCTTGATTCTTTGGACCCTCCTCCAAAACCTAGCTCTTCCGTTGCTCTGGAGTCAACGCCGGCTGTTGAATCGCAGTGCGGCAGTTCAATCGCAAATTTGGACAATCATGGAGGTACTCATCTGGTAAAGTCCGAGGACGCTGCAGATTTGGGGGAAACCAAGTTGCGTCAGGACAATGGTGGCAGTGTTGAACCCAAGAACGGGCCGTTTGGGAACAAGGCGTGTGCGTCCAGTGTTCAAGAAAGAACTGCAAAATTGAAGAGCTCTATTCCAGAGTTGAAAAGGAAGGCCAAGGATTTCAACTCGAAGAATGTTGCATGTTGGAAAGAGGGCGAACGGGTTCCCTTTTTGTTTCTGTGTTTGGGGTTCGATATGATTTCGGAGGAGTCTAGTAGGATTATTATCACCGATATAGTCTGCAACATGCTGAGGACCGTCATGGATACTACGCCCGACGACTTGGTATCTACTGTGTATCTTTTGGCGAATAAGATTGCTCCAGCTCACGAAGGGCTTGAGTTGGGGATTGGGGATGCTTCTATTATCAAAGCTCTTTCTGAGGCTTTTGGGAGGACAGAGGCACAGGTCAAAAAACAGTACAAGGAATTGGGAGATTTAGGTCTTGTTGCTAAAGCCAGCCGTTCATCTCAATCCATGATGCGAAAGCCCGATGCTTTAACTATTACCAAAGTATTTGATACATTTCGGCTGATTGCTAAGGAATCTGGCAAGGATAGTCAGGAGAAAAAAAAGAACCATATCAAGTCACTGCTTGTTGCTGCCACTGACTGCGAACCTTTATATCTGATTAGATTGCTGCAGGCTTCTAAGATTGTTAAGCAGGTGTATTCTATACTCCCAGTTTATGATAAACTTGTCCCTGCTCTTCTTAGTGGTGGTGTGTGGAATCTTTCAAAAACGTGCAACTTTACACCGGGAATTCCAATTGGACCCATGCTGGCAAAACCTACAAAAGGAGTGTCTGAGATCTTAAATAAATTCCAAGGTTTGGAATTTACTTGTGAATACAAATATGATGGGGAGCGTGCCCAGATACATTACATGGAAGATGGTTCAGTTGAGATCTACAGTCGAAATGCTGAACGGAACACTGGAAAGTTCCCTGATGTTGTTCTCACGGTATCAAGGATAAAGAAACCATCTGTAAGATCATTTATTTTGGATTGTGAACTTGTTGCTTATGATCATGGAAAACAAAAGATTCTGCCTTTTCAGATTCTGAGTACTCGAGCTCGTAAGAATGTGGCCATGAGTGATATTAAGGTTGAAGTGTGTGTATTTGCTTTTGATCTACTGTATCTTGATGGTCAACCACTTATCCAGAGAGAACTTAATGTTCGTCGAGAGCTTCTCTATGATTCATTTATTGAAGAACCTGGATATTTTCAATTTGCCACAGCAATAATAACAAATGACCTTGAGGAAATACAAAAGTTCCTTGATGCATCGGTTGATCAAAGCTGTGAGGGTTTAATAATCAAAACACTGAACCGGGATGCTACTTATGAACCTTCCAAGAGGTCGCATAACTGGCTAAAACTGAAGAAGGATTACATAGACAGCATAGGGGATTCGCTTGATCTGGTACCAATTGCTGCTTTCCATGGCCGTGGGAAACGTACAGGTGTCTATGGTGCATTTCTCCTTGCCTGTTATGATAATGACAACGAAGAATTTCAAAGCATTTGTAAGATAGGAACTGGGTTTTCTGAAGCAATGCTTGAGGAACGTTCTGCAAGTCTCCGTTCTAAAGTCATTCCTGAACCTAAGTCATATTATCGGTATGGAGATACAATCAATCCAGATGTTTGGTTTGAGCCTACTGAGGTTTGGGAGGTTAAAGCAGCAGATTTAACTATCAGCCCAGTTCATCGTGCAGGAGTTGGCATTGTGGATTCTGACAAGGGAATTTCTCTTCGGTTTCCACGTCTTGTTCGTGTAAGGAAAGACAAAAATCCAGAGGAAGCATCATCATCAGAGCAGGTTGCCGACATGTATAATGCTCAGAAACACAACCACCAAAACAATCAAGATGACAATGAAGACGACTAAGGAGTGAAGTTTTAACTCTTTCCAAATGTGTTGCTCGCTCGGTTTTCAACCAGATAATTATTGGCAAATGGCAAATTACATTGTCTGATCATGGTGCCATGGAACATGTCATGTCTACTTGGGCCTTGGGGTGTATGTTTCAGGTTCAACCGGTCAGATTTTAGCTGATCTCGATATTCCTTGTAATTGCATAAAATGTTTTCCTGCTGTTGAGCTAAGAGCTTCATGGGCCCACATCTGTTCTGAAATCATCTTTAACAATGTAGACAAAAATGTGAAATCAATTTCTTGACACTTGTACATTATATAATTTTTGATATTACATGA 2800 42.07 MLSLRSCYYLRPITLPHPQFKKLIFFNKPPSFKPIFQNFVSSMSSRPSAFDALMSGARAAAKKKPVNSSPKKRKALDSLDPPPKPSSSVALESTPAVESQCGSSIANLDNHGGTHLVKSEDAADLGETKLRQDNGGSVEPKNGPFGNKACASSVQERTAKLKSSIPELKRKAKDFNSKNVACWKEGERVPFLFLCLGFDMISEESSRIIITDIVCNMLRTVMDTTPDDLVSTVYLLANKIAPAHEGLELGIGDASIIKALSEAFGRTEAQVKKQYKELGDLGLVAKASRSSQSMMRKPDALTITKVFDTFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYLIRLLQASKIVKQVYSILPVYDKLVPALLSGGVWNLSKTCNFTPGIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGERAQIHYMEDGSVEIYSRNAERNTGKFPDVVLTVSRIKKPSVRSFILDCELVAYDHGKQKILPFQILSTRARKNVAMSDIKVEVCVFAFDLLYLDGQPLIQRELNVRRELLYDSFIEEPGYFQFATAIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDSIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASLRSKVIPEPKSYYRYGDTINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVRKDKNPEEASSSEQVADMYNAQKHNHQNNQDDNEDD 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2998503 3019856 + XM_039045032.1 Bhi10g00144 46485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00144 765 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 385 603 - -
Bhi10g00144 765 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 44 765 - -
Bhi10g00144 765 MobiDBLite consensus disorder prediction 60 93 - -
Bhi10g00144 765 ProSiteProfiles ATP-dependent DNA ligase family profile. 499 635 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bhi10g00144 765 Pfam ATP dependent DNA ligase C terminal region 622 733 IPR012309 GO:0003910|GO:0006281|GO:0006310
Bhi10g00144 765 Gene3D - 403 601 - -
Bhi10g00144 765 Gene3D - 167 349 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bhi10g00144 765 Gene3D - 350 395 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bhi10g00144 765 Pfam ATP dependent DNA ligase domain 393 597 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bhi10g00144 765 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 172 384 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bhi10g00144 765 MobiDBLite consensus disorder prediction 740 755 - -
Bhi10g00144 765 Gene3D - 602 764 IPR012340 -
Bhi10g00144 765 CDD OBF_DNA_ligase_I 605 750 - -
Bhi10g00144 765 CDD Adenylation_DNA_ligase_I_Euk 382 600 - -
Bhi10g00144 765 SUPERFAMILY Nucleic acid-binding proteins 605 751 IPR012340 -
Bhi10g00144 765 TIGRFAM dnl1: DNA ligase I, ATP-dependent (dnl1) 351 748 IPR000977 GO:0003910|GO:0005524|GO:0071897
Bhi10g00144 765 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 417 425 IPR016059 GO:0003909
Bhi10g00144 765 Gene3D DNA ligase/mRNA capping enzyme 422 547 - -
Bhi10g00144 765 PANTHER DNA LIGASE 1 44 765 - -
Bhi10g00144 765 Pfam DNA ligase N terminus 190 349 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bhi10g00144 765 ProSitePatterns ATP-dependent DNA ligase signature 2. 571 597 IPR016059 GO:0003909
Bhi10g00144 765 MobiDBLite consensus disorder prediction 731 765 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00144 Bhi-Chr10:2998503 Bhi10g00145 Bhi-Chr10:2998504 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00144 K10747 - csv:101213447 1370.91