Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi10g00144 | TTCTTATTCAGATTCCGACACAGTTCGATCAAATTTAACAATTACAGTCCGATCAAAACCCAAAACCCAAAATCCAAAGCCCTTCCCGCCATTTCTCAGTTCTTCTTCCCTTCCGCTCCTGCTCTGTTCTTCTCTCTCTGAAATACTTTATTCCCCTTTTCATTACCTACAATTGATGCTTTCACTGCGTTCATGTTATTATCTACGCCCCATCACATTGCCTCATCCCCAATTCAAGAAACTCATCTTCTTCAACAAACCTCCCTCTTTCAAACCCATTTTTCAGAATTTTGTTTCATCAATGTCTTCTCGTCCTTCTGCATTCGATGCTCTCATGTCTGGTGCTCGGGCCGCTGCCAAGAAGAAGCCCGTTAATTCTTCTCCCAAGAAGCGTAAAGCCCTTGATTCTTTGGACCCTCCTCCAAAACCTAGCTCTTCCGTTGCTCTGGAGTCAACGCCGGCTGTTGAATCGCAGTGCGGCAGTTCAATCGCAAATTTGGACAATCATGGAGGTACTCATCTGGTAAAGTCCGAGGACGCTGCAGATTTGGGGGAAACCAAGTTGCGTCAGGACAATGGTGGCAGTGTTGAACCCAAGAACGGGCCGTTTGGGAACAAGGCGTGTGCGTCCAGTGTTCAAGAAAGAACTGCAAAATTGAAGAGCTCTATTCCAGAGTTGAAAAGGAAGGCCAAGGATTTCAACTCGAAGAATGTTGCATGTTGGAAAGAGGGCGAACGGGTTCCCTTTTTGTTTCTGTGTTTGGGGTTCGATATGATTTCGGAGGAGTCTAGTAGGATTATTATCACCGATATAGTCTGCAACATGCTGAGGACCGTCATGGATACTACGCCCGACGACTTGGTATCTACTGTGTATCTTTTGGCGAATAAGATTGCTCCAGCTCACGAAGGGCTTGAGTTGGGGATTGGGGATGCTTCTATTATCAAAGCTCTTTCTGAGGCTTTTGGGAGGACAGAGGCACAGGTCAAAAAACAGTACAAGGAATTGGGAGATTTAGGTCTTGTTGCTAAAGCCAGCCGTTCATCTCAATCCATGATGCGAAAGCCCGATGCTTTAACTATTACCAAAGTATTTGATACATTTCGGCTGATTGCTAAGGAATCTGGCAAGGATAGTCAGGAGAAAAAAAAGAACCATATCAAGTCACTGCTTGTTGCTGCCACTGACTGCGAACCTTTATATCTGATTAGATTGCTGCAGGCTTCTAAGATTGTTAAGCAGGTGTATTCTATACTCCCAGTTTATGATAAACTTGTCCCTGCTCTTCTTAGTGGTGGTGTGTGGAATCTTTCAAAAACGTGCAACTTTACACCGGGAATTCCAATTGGACCCATGCTGGCAAAACCTACAAAAGGAGTGTCTGAGATCTTAAATAAATTCCAAGGTTTGGAATTTACTTGTGAATACAAATATGATGGGGAGCGTGCCCAGATACATTACATGGAAGATGGTTCAGTTGAGATCTACAGTCGAAATGCTGAACGGAACACTGGAAAGTTCCCTGATGTTGTTCTCACGGTATCAAGGATAAAGAAACCATCTGTAAGATCATTTATTTTGGATTGTGAACTTGTTGCTTATGATCATGGAAAACAAAAGATTCTGCCTTTTCAGATTCTGAGTACTCGAGCTCGTAAGAATGTGGCCATGAGTGATATTAAGGTTGAAGTGTGTGTATTTGCTTTTGATCTACTGTATCTTGATGGTCAACCACTTATCCAGAGAGAACTTAATGTTCGTCGAGAGCTTCTCTATGATTCATTTATTGAAGAACCTGGATATTTTCAATTTGCCACAGCAATAATAACAAATGACCTTGAGGAAATACAAAAGTTCCTTGATGCATCGGTTGATCAAAGCTGTGAGGGTTTAATAATCAAAACACTGAACCGGGATGCTACTTATGAACCTTCCAAGAGGTCGCATAACTGGCTAAAACTGAAGAAGGATTACATAGACAGCATAGGGGATTCGCTTGATCTGGTACCAATTGCTGCTTTCCATGGCCGTGGGAAACGTACAGGTGTCTATGGTGCATTTCTCCTTGCCTGTTATGATAATGACAACGAAGAATTTCAAAGCATTTGTAAGATAGGAACTGGGTTTTCTGAAGCAATGCTTGAGGAACGTTCTGCAAGTCTCCGTTCTAAAGTCATTCCTGAACCTAAGTCATATTATCGGTATGGAGATACAATCAATCCAGATGTTTGGTTTGAGCCTACTGAGGTTTGGGAGGTTAAAGCAGCAGATTTAACTATCAGCCCAGTTCATCGTGCAGGAGTTGGCATTGTGGATTCTGACAAGGGAATTTCTCTTCGGTTTCCACGTCTTGTTCGTGTAAGGAAAGACAAAAATCCAGAGGAAGCATCATCATCAGAGCAGGTTGCCGACATGTATAATGCTCAGAAACACAACCACCAAAACAATCAAGATGACAATGAAGACGACTAAGGAGTGAAGTTTTAACTCTTTCCAAATGTGTTGCTCGCTCGGTTTTCAACCAGATAATTATTGGCAAATGGCAAATTACATTGTCTGATCATGGTGCCATGGAACATGTCATGTCTACTTGGGCCTTGGGGTGTATGTTTCAGGTTCAACCGGTCAGATTTTAGCTGATCTCGATATTCCTTGTAATTGCATAAAATGTTTTCCTGCTGTTGAGCTAAGAGCTTCATGGGCCCACATCTGTTCTGAAATCATCTTTAACAATGTAGACAAAAATGTGAAATCAATTTCTTGACACTTGTACATTATATAATTTTTGATATTACATGA | 2800 | 42.07 | MLSLRSCYYLRPITLPHPQFKKLIFFNKPPSFKPIFQNFVSSMSSRPSAFDALMSGARAAAKKKPVNSSPKKRKALDSLDPPPKPSSSVALESTPAVESQCGSSIANLDNHGGTHLVKSEDAADLGETKLRQDNGGSVEPKNGPFGNKACASSVQERTAKLKSSIPELKRKAKDFNSKNVACWKEGERVPFLFLCLGFDMISEESSRIIITDIVCNMLRTVMDTTPDDLVSTVYLLANKIAPAHEGLELGIGDASIIKALSEAFGRTEAQVKKQYKELGDLGLVAKASRSSQSMMRKPDALTITKVFDTFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYLIRLLQASKIVKQVYSILPVYDKLVPALLSGGVWNLSKTCNFTPGIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGERAQIHYMEDGSVEIYSRNAERNTGKFPDVVLTVSRIKKPSVRSFILDCELVAYDHGKQKILPFQILSTRARKNVAMSDIKVEVCVFAFDLLYLDGQPLIQRELNVRRELLYDSFIEEPGYFQFATAIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDSIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASLRSKVIPEPKSYYRYGDTINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVRKDKNPEEASSSEQVADMYNAQKHNHQNNQDDNEDD | 765 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2998503 | 3019856 | + | XM_039045032.1 | Bhi10g00144 | 46485 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi10g00144 | 765 | SUPERFAMILY | DNA ligase/mRNA capping enzyme, catalytic domain | 385 | 603 | - | - | |
Bhi10g00144 | 765 | PANTHER | DNA LIGASE 1/3 FAMILY MEMBER | 44 | 765 | - | - | |
Bhi10g00144 | 765 | MobiDBLite | consensus disorder prediction | 60 | 93 | - | - | |
Bhi10g00144 | 765 | ProSiteProfiles | ATP-dependent DNA ligase family profile. | 499 | 635 | IPR012310 | GO:0003910|GO:0005524|GO:0006281|GO:0006310 | |
Bhi10g00144 | 765 | Pfam | ATP dependent DNA ligase C terminal region | 622 | 733 | IPR012309 | GO:0003910|GO:0006281|GO:0006310 | |
Bhi10g00144 | 765 | Gene3D | - | 403 | 601 | - | - | |
Bhi10g00144 | 765 | Gene3D | - | 167 | 349 | IPR036599 | GO:0003677|GO:0003910|GO:0006281|GO:0006310 | |
Bhi10g00144 | 765 | Gene3D | - | 350 | 395 | IPR036599 | GO:0003677|GO:0003910|GO:0006281|GO:0006310 | |
Bhi10g00144 | 765 | Pfam | ATP dependent DNA ligase domain | 393 | 597 | IPR012310 | GO:0003910|GO:0005524|GO:0006281|GO:0006310 | |
Bhi10g00144 | 765 | SUPERFAMILY | ATP-dependent DNA ligase DNA-binding domain | 172 | 384 | IPR036599 | GO:0003677|GO:0003910|GO:0006281|GO:0006310 | |
Bhi10g00144 | 765 | MobiDBLite | consensus disorder prediction | 740 | 755 | - | - | |
Bhi10g00144 | 765 | Gene3D | - | 602 | 764 | IPR012340 | - | |
Bhi10g00144 | 765 | CDD | OBF_DNA_ligase_I | 605 | 750 | - | - | |
Bhi10g00144 | 765 | CDD | Adenylation_DNA_ligase_I_Euk | 382 | 600 | - | - | |
Bhi10g00144 | 765 | SUPERFAMILY | Nucleic acid-binding proteins | 605 | 751 | IPR012340 | - | |
Bhi10g00144 | 765 | TIGRFAM | dnl1: DNA ligase I, ATP-dependent (dnl1) | 351 | 748 | IPR000977 | GO:0003910|GO:0005524|GO:0071897 | |
Bhi10g00144 | 765 | ProSitePatterns | ATP-dependent DNA ligase AMP-binding site. | 417 | 425 | IPR016059 | GO:0003909 | |
Bhi10g00144 | 765 | Gene3D | DNA ligase/mRNA capping enzyme | 422 | 547 | - | - | |
Bhi10g00144 | 765 | PANTHER | DNA LIGASE 1 | 44 | 765 | - | - | |
Bhi10g00144 | 765 | Pfam | DNA ligase N terminus | 190 | 349 | IPR012308 | GO:0003677|GO:0003910|GO:0006281|GO:0006310 | |
Bhi10g00144 | 765 | ProSitePatterns | ATP-dependent DNA ligase signature 2. | 571 | 597 | IPR016059 | GO:0003909 | |
Bhi10g00144 | 765 | MobiDBLite | consensus disorder prediction | 731 | 765 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi10g00144 | Bhi-Chr10:2998503 | Bhi10g00145 | Bhi-Chr10:2998504 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi10g00144 | K10747 | - | csv:101213447 | 1370.91 |