Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00145 TCTTATTCAGATTCCGACACAGTTCGATCAAATTTAACAATTACAGTCCGATCAAAACCCAAAACCCAAAATCCAAAGCCCTTCCCGCCATTTCTCAGTTCTTCTTCCCTTCCGCTCCTGCTCTGTTCTTCTCTCTCTGAAATACTTTATTCCCCTTTTCATTACCTACAATTGATGCTTTCACTGCGTTCATGTTATTATCTACGCCCCATCACATTGCCTCATCCCCAATTCAAGAAACTCATCTTCTTCAACAAACCTCCCTCTTTCAAACCCATTTTTCAGAATTTTGTTTCATCAATGTCTTCTCGTCCTTCTGCATTCGATGCTCTCATGTCTGGTGCTCGGGCCGCTGCCAAGAAGAAGCCCGTTAATTCTTCTCCCAAGAAGCGTAAAGCCCTTGATTCTTTGGACCCTCCTCCAAAACCTAGCTCTTCCGTTGCTCTGGAGTCAACGCCGGCTGTTGAATCGCAGTGCGGCAGTTCAATCGCAAATTTGGACAATCATGGAGGTACTCATCTGGTAAAGTCCGAGGACGCTGCAGATTTGGGGGAAACCAAGTTGCGTCAGGACAATGGTGGCAGTGTTGAACCCAAGAACGGGCCGTTTGGGAACAAGGCGTGTGCGTCCAGTGTTCAAGAAAGAACTGCAAAATTGAAGAGCTCTATTCCAGAGTTGAAAAGGAAGGCCAAGGATTTCAACTCGAAGAATGTTGCATGTTGGAAAGAGGGCGAACGGGTTCCCTTTTTGTTTCTGTGTTTGGGGTTCGATATGATTTCGGAGGAGTCTAGTAGGATTATTATCACCGATATAGTCTGCAACATGCTGAGGACCGTCATGGATACTACGCCCGACGACTTGGTATCTACTGTGTATCTTTTGGCGAATAAGATTGCTCCAGCTCACGAAGGGCTTGAGTTGGGGATTGGGGATGCTTCTATTATCAAAGCTCTTTCTGAGGCTTTTGGGAGGACAGAGGCACAGGTCAAAAAACAGTACAAGGAATTGGGAGATTTAGGTCTTGTTGCTAAAGCCAGCCGTTCATCTCAATCCATGATGCGAAAGCCCGATGCTTTAACTATTACCAAAGTATTTGATACATTTCGGCTGATTGCTAAGGAATCTGGCAAGGATAGTCAGGAGAAAAAAAAGAACCATATCAAGTCACTGCTTGTTGCTGCCACTGACTGCGAACCTTTATATCTGATTAGATTGCTGCAGACAAAATTGCGAATTGGACTTGCTGAGCAGACTCTTTTAGCTGCATTAGGACAAGCAGCTGTATATGCTGAAAAACACTCAACACCACCATCGAATATTCAATCTCCTCTAGAAGAGGCTTCTAAGATTGTTAAGCAGGTGTATTCTATACTCCCAGTTTATGATAAACTTGTCCCTGCTCTTCTTAGTGGTGGTGTGTGGAATCTTTCAAAAACGTGCAACTTTACACCGGGAATTCCAATTGGACCCATGCTGGCAAAACCTACAAAAGGAGTGTCTGAGATCTTAAATAAATTCCAAGGTTTGGAATTTACTTGTGAATACAAATATGATGGGGAGCGTGCCCAGATACATTACATGGAAGATGGTTCAGTTGAGATCTACAGTCGAAATGCTGAACGGAACACTGGAAAGTTCCCTGATGTTGTTCTCACGGTATCAAGGATAAAGAAACCATCTGTAAGATCATTTATTTTGGATTGTGAACTTGTTGCTTATGATCATGGAAAACAAAAGATTCTGCCTTTTCAGATTCTGAGTACTCGAGCTCGTAAGAATGTGGCCATGAGTGATATTAAGGTTGAAGTGTGTGTATTTGCTTTTGATCTACTGTATCTTGATGGTCAACCACTTATCCAGAGAGAACTTAATGTTCGTCGAGAGCTTCTCTATGATTCATTTATTGAAGAACCTGGATATTTTCAATTTGCCACAGCAATAATAACAAATGACCTTGAGGAAATACAAAAGTTCCTTGATGCATCGGTTGATCAAAGCTGTGAGGGTTTAATAATCAAAACACTGAACCGGGATGCTACTTATGAACCTTCCAAGAGGTCGCATAACTGGCTAAAACTGAAGAAGGATTACATAGACAGCATAGGGGATTCGCTTGATCTGGTACCAATTGCTGCTTTCCATGGCCGTGGGAAACGTACAGGTGTCTATGGTGCATTTCTCCTTGCCTGTTATGATAATGACAACGAAGAATTTCAAAGCATTTGTAAGATAGGAACTGGGTTTTCTGAAGCAATGCTTGAGGAACGTTCTGCAAGTCTCCGTTCTAAAGTCATTCCTGAACCTAAGTCATATTATCGGTATGGAGATACAATCAATCCAGATGTTTGGTTTGAGCCTACTGAGGTTTGGGAGGTTAAAGCAGCAGATTTAACTATCAGCCCAGTTCATCGTGCAGGAGTTGGCATTGTGGATTCTGACAAGGGAATTTCTCTTCGGTTTCCACGTCTTGTTCGTGTAAGGAAAGACAAAAATCCAGAGGAAGCATCATCATCAGAGCAGGTTGCCGACATGTATAATGCTCAGAAACACAACCACCAAAACAATCAAGATGACAATGAAGACGACTAAGGAGTGAAGTTTTAACTCTTTCCAAATGTGTTGCTCGCTCGGTTTTCAACCAGATAATTATTGGCAAATGGCAAATTACATTGTCTGATCATGGTGCCATGGAACATGTCATGTCTACTTGGGCCTTGGGGTGTATGTTTCAGGTTCAACCGGTCAGATTTTAGCTGATCTCGATATTCCTTGTAATTGCATAAAATGTTTTCCTGCTGTTGAGCTAAGAGCTTCATGGGCCCACATCTGTTCTGAAATCATCTTTAACAATGTAGACAAAAATGTGAAATCAATTTCTTGACACTTGTACATTATATAATTTTTGATATTACATGA 2916 42.04 MLSLRSCYYLRPITLPHPQFKKLIFFNKPPSFKPIFQNFVSSMSSRPSAFDALMSGARAAAKKKPVNSSPKKRKALDSLDPPPKPSSSVALESTPAVESQCGSSIANLDNHGGTHLVKSEDAADLGETKLRQDNGGSVEPKNGPFGNKACASSVQERTAKLKSSIPELKRKAKDFNSKNVACWKEGERVPFLFLCLGFDMISEESSRIIITDIVCNMLRTVMDTTPDDLVSTVYLLANKIAPAHEGLELGIGDASIIKALSEAFGRTEAQVKKQYKELGDLGLVAKASRSSQSMMRKPDALTITKVFDTFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYLIRLLQTKLRIGLAEQTLLAALGQAAVYAEKHSTPPSNIQSPLEEASKIVKQVYSILPVYDKLVPALLSGGVWNLSKTCNFTPGIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGERAQIHYMEDGSVEIYSRNAERNTGKFPDVVLTVSRIKKPSVRSFILDCELVAYDHGKQKILPFQILSTRARKNVAMSDIKVEVCVFAFDLLYLDGQPLIQRELNVRRELLYDSFIEEPGYFQFATAIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDSIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASLRSKVIPEPKSYYRYGDTINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVRKDKNPEEASSSEQVADMYNAQKHNHQNNQDDNEDD 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2998504 3019856 + XM_039045030.1 Bhi10g00145 46486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00145 804 MobiDBLite consensus disorder prediction 60 93 - -
Bhi10g00145 804 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 424 642 - -
Bhi10g00145 804 Pfam ATP dependent DNA ligase C terminal region 661 772 IPR012309 GO:0003910|GO:0006281|GO:0006310
Bhi10g00145 804 SUPERFAMILY Nucleic acid-binding proteins 644 790 IPR012340 -
Bhi10g00145 804 CDD OBF_DNA_ligase_I 644 789 - -
Bhi10g00145 804 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 456 464 IPR016059 GO:0003909
Bhi10g00145 804 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 172 423 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bhi10g00145 804 ProSitePatterns ATP-dependent DNA ligase signature 2. 610 636 IPR016059 GO:0003909
Bhi10g00145 804 TIGRFAM dnl1: DNA ligase I, ATP-dependent (dnl1) 248 787 IPR000977 GO:0003910|GO:0005524|GO:0071897
Bhi10g00145 804 CDD Adenylation_DNA_ligase_I_Euk 421 639 - -
Bhi10g00145 804 Pfam DNA ligase N terminus 190 365 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bhi10g00145 804 ProSiteProfiles ATP-dependent DNA ligase family profile. 538 674 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bhi10g00145 804 Gene3D DNA ligase/mRNA capping enzyme 461 586 - -
Bhi10g00145 804 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 44 804 - -
Bhi10g00145 804 Gene3D - 167 434 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bhi10g00145 804 PANTHER DNA LIGASE 1 44 804 - -
Bhi10g00145 804 Gene3D - 641 803 IPR012340 -
Bhi10g00145 804 MobiDBLite consensus disorder prediction 770 804 - -
Bhi10g00145 804 MobiDBLite consensus disorder prediction 779 794 - -
Bhi10g00145 804 Pfam ATP dependent DNA ligase domain 432 636 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bhi10g00145 804 Gene3D - 442 640 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02178 Bhi-Chr1:51307769 Bhi10g00145 Bhi-Chr10:2998504 5.46E-121 dispersed
Bhi01g02179 Bhi-Chr1:51307770 Bhi10g00145 Bhi-Chr10:2998504 3.21E-167 dispersed
Bhi06g01207 Bhi-Chr6:35293735 Bhi10g00145 Bhi-Chr10:2998504 2.12E-31 dispersed
Bhi06g01208 Bhi-Chr6:35293735 Bhi10g00145 Bhi-Chr10:2998504 1.54E-30 dispersed
Bhi10g00144 Bhi-Chr10:2998503 Bhi10g00145 Bhi-Chr10:2998504 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00145 K10747 - csv:101213447 1460.66