Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00180 TTTGTTTTTTCTAATAAGCGCTTCCCTCCACATCTATATCCGAACCAAGTTCCCTCCCTTTCAACCTTCCCTCGTTTTCTGCTCTCGTTTTCTCTCTGAATCTCTCCCGTTTTTCTCCATTTTTTCTGAGAATCCAAACGCTCAGATCTCTCCAAGCTCCTCCTTCTTCTTCCACAAATTCCGTTCCTGTTCTTATTTCCATCAATTTTCCCCAATTGCACCTAAAACCCCAAACTCACTCCATTTTCCCTCTCTTTCTCTGACCTTCTAACCCAAATCCGCAATACACCAGGACCTCACTCGATCTTTGCTTCCCCTTCTCTTCAACCCTGCTCTATGTCGGGTTCTCGAGCTCCTAACTCCTCTGGCCAACTGTCTGAGCAGATCATGCACTCTCTTAAGCGCCAACTCCCTTTCTCTTCCATGAAACCACCATTTGCATCTCCTGGGGACTATCACCGCTTCGCCCCCGACCCTCGACTTCCCGATCAAGAACCTGATGCCATCGTAGTCAAATCTTCATTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCTGAGTCGACTGATAGAGCAGCTGGCCCTAGATTTACTGAGGTAGTTAACAGTCCCCATCAAACACCTGTATCTGTCAAAGGAGGAAAGGGAAGCAAATCAAGGTTTACCAAATGCAGTAGATCAGGGCCACAGACTCCCATGTCAAATGTTGGTTCACCTTCTACAAACAATCTTACTCCAGCTGGTCCATGCCGTTATGATAGTTCTCTCGGTCTCTTGACAAAGAAGTTCATTAATCTGATTAAACAAGCGGAAGATGGTATTCTTGATCTAAATAAAGCAGCTGACACGTTGGAGGTACAAAAAAGACGAATATATGATATAACAAATGTCCTCGAGGGAATTGGTCTCATAGAAAAGAAGCTTAAGAACAGAATTCAGTGGAAGGGGCTTGATGTCTCAAGGTCAGGGGATGTTGATGACAATTATGCTGGTCTACAGTTACATGTGCAGGCAGAAGTAGAGAACCTTACCATGGAGGAGCGTGGAATAGACGAACAAATAAGAGAGATGCAGGAAAGATTAAGGGACCTCAGTGAAGATGAGAACAACCAAAGGTGGCTTTTTGTAACCGAGGAAGACATCAAGGGTTTGCCCTGTTTCCAGAATGAAACTCTCATAGCTATTAAAGCTCCCCATGGAACCACTTTAGAAGTTCCAGATCCCGATGAGGCTGTTGACTACCCCCAAAGGAGGTACAGGATAGTCCTCAGAAGCACCATGGGACCCATAGATGTTTACCTTGTTAGTCAGTTTGAAGCTAAGTTTGAGGAGATAAATGCTGTGGAAGTGCCCCCAAGTTTGCCGTCAAGTTCAGGATTGAATGAAGCACCTGCAACAACGATCGTAACAGAGGATACCAGGGGAAAGGAAATTGAAACGCGGGAGCAAGATGTACACAGAATGTGCTCCGATCTAAATGCTTCACAGGACTTCGTGGGTGGAATTATGAAAATTGTTCCCTCGGTTGTAGATAGTGATGCTGATTACTGGCTCTTGTCTGATGCTGATGTTAGTATCACTGACATGTGGAGAACTGAACCTAGCGTTGAGTGGAATGAATTGGGTACATTTCATGAAGATTACAGTATCGGCAATGTCAGCTCACCCCAAACCCAGACTCCACTTCCCAATGATGCACCTGATTTGCCTTCTGCTAATCCTTCTAGCAGCTGAAACTGTACGGGGTATCTGTTGAGATGTAACTGATAATCAATGCTACGGTTGTGCAAGAACTTGTATAATGTATGATCCTCGTGATCCTTACTTAGGTCCCCTGGGGACTGGAACCGATGATCTCAGATTGGAACCAGCCTCCATGATAATTCCTAGAGAAGGTCCTCTAACCAAAAAGCTGGAGAGGAAACTGCTGATGGGAAGGGCTACCGTGTACAGTTTAGTACAAAAATGTGTAGTAAATAAAATAGCCATTTCTGCATTGTAATATTCTTTGTTCCATGATAAGAATAGCATGTGCACGACATTCATTTAAGACAAGTTTAGTTTCAGTTCAATTTA 2076 44.22 MSGSRAPNSSGQLSEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLPDQEPDAIVVKSSLKRKSEVADYEAESTDRAAGPRFTEVVNSPHQTPVSVKGGKGSKSRFTKCSRSGPQTPMSNVGSPSTNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYAGLQLHVQAEVENLTMEERGIDEQIREMQERLRDLSEDENNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEAKFEEINAVEVPPSLPSSSGLNEAPATTIVTEDTRGKEIETREQDVHRMCSDLNASQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTEPSVEWNELGTFHEDYSIGNVSSPQTQTPLPNDAPDLPSANPSSS 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3975320 3983271 - XM_039045872.1 Bhi10g00180 46521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00180 465 MobiDBLite consensus disorder prediction 108 134 - -
Bhi10g00180 465 PANTHER TRANSCRIPTION FACTOR E2F 18 454 IPR015633 GO:0000978|GO:0006357
Bhi10g00180 465 Gene3D - 220 325 - -
Bhi10g00180 465 Coils Coil 155 175 - -
Bhi10g00180 465 MobiDBLite consensus disorder prediction 437 465 - -
Bhi10g00180 465 PANTHER TRANSCRIPTION FACTOR E2FB 18 454 - -
Bhi10g00180 465 MobiDBLite consensus disorder prediction 1 23 - -
Bhi10g00180 465 CDD E2F_DD 221 325 IPR032198 GO:0046983
Bhi10g00180 465 Pfam E2F/DP family winged-helix DNA-binding domain 141 204 IPR003316 GO:0005667|GO:0006355
Bhi10g00180 465 SMART E2F_TDP_2 139 204 IPR003316 GO:0005667|GO:0006355
Bhi10g00180 465 Pfam E2F transcription factor CC-MB domain 225 324 IPR032198 GO:0046983
Bhi10g00180 465 Gene3D - 133 206 IPR036388 -
Bhi10g00180 465 MobiDBLite consensus disorder prediction 89 134 - -
Bhi10g00180 465 MobiDBLite consensus disorder prediction 1 53 - -
Bhi10g00180 465 Coils Coil 228 255 - -
Bhi10g00180 465 SUPERFAMILY E2F-DP heterodimerization region 223 325 IPR037241 -
Bhi10g00180 465 SUPERFAMILY Winged helix DNA-binding domain 139 202 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00180 Bhi-Chr10:3975320 Bhi10g00182 Bhi-Chr10:3975320 0 dispersed
Bhi10g00180 Bhi-Chr10:3975320 Bhi10g00181 Bhi-Chr10:3975320 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2079 PF16421 E2F_CC-MB 1.90E-34 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00180 K06620 - csv:101219318 876.7