Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00181 TTGTTTTTTCTAATAAGCGCTTCCCTCCACATCTATATCCGAACCAAGTTCCCTCCCTTTCAACCTTCCCTCGTTTTCTGCTCTCGTTTTCTCTCTGAATCTCTCCCGTTTTTCTCCATTTTTTCTGAGAATCCAAACGCTCAGATCTCTCCAAGCTCCTCCTTCTTCTTCCACAAATTCCGTTCCTGTTCTTATTTCCATCAATTTTCCCCAATTGCACCTAAAACCCCAAACTCACTCCATTTTCCCTCTCTTTCTCTGACCTTCTAACCCAAATCCGCAATACACCAGGACCTCACTCGATCTTTGCTTCCCCTTCTCTTCAACCCTGCTCTATGTCGGGTTCTCGAGCTCCTAACTCCTCTGGCCAACTGTCTGAGCAGATCATGCACTCTCTTAAGCGCCAACTCCCTTTCTCTTCCATGAAACCACCATTTGCATCTCCTGGGGACTATCACCGCTTCGCCCCCGACCCTCGACTTCCCGATCAAGAACCTGATGCCATCGTAGTCAAATCTTCACAGTTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCTGAGTCGACTGATAGAGCAGCTGGCCCTAGATTTACTGAGGTAGTTAACAGTCCCCATCAAACACCTGTATCTGTCAAAGGAGGAAAGGGAAGCAAATCAAGGTTTACCAAATGCAGTAGATCAGGGCCACAGACTCCCATGTCAAATGTTGGTTCACCTTCTACAAACAATCTTACTCCAGCTGGTCCATGCCGTTATGATAGTTCTCTCGGTCTCTTGACAAAGAAGTTCATTAATCTGATTAAACAAGCGGAAGATGGTATTCTTGATCTAAATAAAGCAGCTGACACGTTGGAGGTACAAAAAAGACGAATATATGATATAACAAATGTCCTCGAGGGAATTGGTCTCATAGAAAAGAAGCTTAAGAACAGAATTCAGTGGAAGGGGCTTGATGTCTCAAGGTCAGGGGATGTTGATGACAATTATGCTGGTCTACAGTTACATGTGCAGGCAGAAGTAGAGAACCTTACCATGGAGGAGCGTGGAATAGACGAACAAATAAGAGAGATGCAGGAAAGATTAAGGGACCTCAGTGAAGATGAGAACAACCAAAGGTGGCTTTTTGTAACCGAGGAAGACATCAAGGGTTTGCCCTGTTTCCAGAATGAAACTCTCATAGCTATTAAAGCTCCCCATGGAACCACTTTAGAAGTTCCAGATCCCGATGAGGCTGTTGACTACCCCCAAAGGAGGTACAGGATAGTCCTCAGAAGCACCATGGGACCCATAGATGTTTACCTTGTTAGTCAGTTTGAAGCTAAGTTTGAGGAGATAAATGCTGTGGAAGTGCCCCCAAGTTTGCCGTCAAGTTCAGGATTGAATGAAGCACCTGCAACAACGATCGTAACAGAGGATACCAGGGGAAAGGAAATTGAAACGCGGGAGCAAGATGTACACAGAATGTGCTCCGATCTAAATGCTTCACAGGACTTCGTGGGTGGAATTATGAAAATTGTTCCCTCGGTTGTAGATAGTGATGCTGATTACTGGCTCTTGTCTGATGCTGATGTTAGTATCACTGACATGTGGAGAACTGAACCTAGCGTTGAGTGGAATGAATTGGGTACATTTCATGAAGATTACAGTATCGGCAATGTCAGCTCACCCCAAACCCAGACTCCACTTCCCAATGATGCACCTGATTTGCCTTCTGCTAATCCTTCTAGCAGCTGAAACTGTACGGGGTATCTGTTGAGATGTAACTGATAATCAATGCTACGGTTGTGCAAGAACTTGTATAATGTATGATCCTCGTGATCCTTACTTAGGTCCCCTGGGGACTGGAACCGATGATCTCAGATTGGAACCAGCCTCCATGATAATTCCTAGAGAAGGTCCTCTAACCAAAAAGCTGGAGAGGAAACTGCTGATGGGAAGGGCTACCGTGTACAGTTTAGTACAAAAATGTGTAGTAAATAAAATAGCCATTTCTGCATTGTAATATTCTTTGTTCCATGATAAGAATAGCATGTGCACGACATTCATTTAAGACAAGTTTAGTTTCAGTTCAATTTA 2078 44.27 MSGSRAPNSSGQLSEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLPDQEPDAIVVKSSQLKRKSEVADYEAESTDRAAGPRFTEVVNSPHQTPVSVKGGKGSKSRFTKCSRSGPQTPMSNVGSPSTNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYAGLQLHVQAEVENLTMEERGIDEQIREMQERLRDLSEDENNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEAKFEEINAVEVPPSLPSSSGLNEAPATTIVTEDTRGKEIETREQDVHRMCSDLNASQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTEPSVEWNELGTFHEDYSIGNVSSPQTQTPLPNDAPDLPSANPSSS 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3975320 3983270 - XM_039045871.1 Bhi10g00181 46522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00181 466 Pfam E2F transcription factor CC-MB domain 226 325 IPR032198 GO:0046983
Bhi10g00181 466 PANTHER TRANSCRIPTION FACTOR E2F 18 455 IPR015633 GO:0000978|GO:0006357
Bhi10g00181 466 MobiDBLite consensus disorder prediction 438 466 - -
Bhi10g00181 466 PANTHER TRANSCRIPTION FACTOR E2FB 18 455 - -
Bhi10g00181 466 Coils Coil 229 256 - -
Bhi10g00181 466 CDD E2F_DD 222 326 IPR032198 GO:0046983
Bhi10g00181 466 MobiDBLite consensus disorder prediction 1 23 - -
Bhi10g00181 466 MobiDBLite consensus disorder prediction 90 135 - -
Bhi10g00181 466 SMART E2F_TDP_2 140 205 IPR003316 GO:0005667|GO:0006355
Bhi10g00181 466 Coils Coil 156 176 - -
Bhi10g00181 466 MobiDBLite consensus disorder prediction 1 53 - -
Bhi10g00181 466 Gene3D - 134 207 IPR036388 -
Bhi10g00181 466 Gene3D - 221 326 - -
Bhi10g00181 466 Pfam E2F/DP family winged-helix DNA-binding domain 142 205 IPR003316 GO:0005667|GO:0006355
Bhi10g00181 466 MobiDBLite consensus disorder prediction 109 135 - -
Bhi10g00181 466 SUPERFAMILY Winged helix DNA-binding domain 140 203 IPR036390 -
Bhi10g00181 466 SUPERFAMILY E2F-DP heterodimerization region 224 326 IPR037241 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00181 Bhi-Chr10:3975320 Bhi02g00388 Bhi-Chr2:7466028 1.05E-10 dispersed
Bhi10g00180 Bhi-Chr10:3975320 Bhi10g00181 Bhi-Chr10:3975320 0 tandem
Bhi10g00181 Bhi-Chr10:3975320 Bhi10g00182 Bhi-Chr10:3975320 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2080 PF16421 E2F_CC-MB 2.00E-34 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00181 K06620 - csv:101219318 882.863