Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00182 GTTTTTTCTAATAAGCGCTTCCCTCCACATCTATATCCGAACCAAGTTCCCTCCCTTTCAACCTTCCCTCGTTTTCTGCTCTCGTTTTCTCTCTGAATCTCTCCCGTTTTTCTCCATTTTTTCTGAGAATCCAAACGCTCAGATCTCTCCAAGCTCCTCCTTCTTCTTCCACAAATTCCGTTCCTGTTCTTATTTCCATCAATTTTCCCCAATTGCACCTAAAACCCCAAACTCACTCCATTTTCCCTCTCTTTCTCTGACCTTCTAACCCAAATCCGCAATACACCAGGACCTCACTCGATCTTTGCTTCCCCTTCTCTTCAACCCTGCTCTATGTCGGGTTCTCGAGCTCCTAACTCCTCTGGCCAACTGTCTGAGCAGATCATGCACTCTCTTAAGCGCCAACTCCCTTTCTCTTCCATGAAACCACCATTTGCATCTCCTGGGGACTATCACCGCTTCGCCCCCGACCCTCGACTTCCCGATCAAGAACCTGATGCCATCGTAGTCAAATCTTCACAGTTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCTGAGTCGACTGATAGAGCAGCTGGCCCTAGATTTACTGAGGTAGTTAACAGTCCCCATCAAACACCTGTATCTGTCAAAGGAGGAAAGGGAAGCAAATCAAGGTTTACCAAATGCAGTAGATCAGGGCCACAGACTCCCATGTCAAATGTTGGTTCACCTTCTACAAACAATCTTACTCCAGCTGGTCCATGCCGTTATGATAGTTCTCTCGGTCTCTTGACAAAGAAGTTCATTAATCTGATTAAACAAGCGGAAGATGGTATTCTTGATCTAAATAAAGCAGCTGACACGTTGGAGGTACAAAAAAGACGAATATATGATATAACAAATGTCCTCGAGGGAATTGGTCTCATAGAAAAGAAGCTTAAGAACAGAATTCAGTGGAAGGGGCTTGATGTCTCAAGGTCAGGGGATGTTGATGACAATTATGCTGGTCTACAGGCAGAAGTAGAGAACCTTACCATGGAGGAGCGTGGAATAGACGAACAAATAAGAGAGATGCAGGAAAGATTAAGGGACCTCAGTGAAGATGAGAACAACCAAAGGTGGCTTTTTGTAACCGAGGAAGACATCAAGGGTTTGCCCTGTTTCCAGAATGAAACTCTCATAGCTATTAAAGCTCCCCATGGAACCACTTTAGAAGTTCCAGATCCCGATGAGGCTGTTGACTACCCCCAAAGGAGGTACAGGATAGTCCTCAGAAGCACCATGGGACCCATAGATGTTTACCTTGTTAGTCAGTTTGAAGCTAAGTTTGAGGAGATAAATGCTGTGGAAGTGCCCCCAAGTTTGCCGTCAAGTTCAGGATTGAATGAAGCACCTGCAACAACGATCGTAACAGAGGATACCAGGGGAAAGGAAATTGAAACGCGGGAGCAAGATGTACACAGAATGTGCTCCGATCTAAATGCTTCACAGGACTTCGTGGGTGGAATTATGAAAATTGTTCCCTCGGTTGTAGATAGTGATGCTGATTACTGGCTCTTGTCTGATGCTGATGTTAGTATCACTGACATGTGGAGAACTGAACCTAGCGTTGAGTGGAATGAATTGGGTACATTTCATGAAGATTACAGTATCGGCAATGTCAGCTCACCCCAAACCCAGACTCCACTTCCCAATGATGCACCTGATTTGCCTTCTGCTAATCCTTCTAGCAGCTGAAACTGTACGGGGTATCTGTTGAGATGTAACTGATAATCAATGCTACGGTTGTGCAAGAACTTGTATAATGTATGATCCTCGTGATCCTTACTTAGGTCCCCTGGGGACTGGAACCGATGATCTCAGATTGGAACCAGCCTCCATGATAATTCCTAGAGAAGGTCCTCTAACCAAAAAGCTGGAGAGGAAACTGCTGATGGGAAGGGCTACCGTGTACAGTTTAGTACAAAAATGTGTAGTAAATAAAATAGCCATTTCTGCATTGTAATATTCTTTGTTCCATGATAAGAATAGCATGTGCACGACATTCATTTAAGACAAGTTTAGTTTCAGTTCAATTTA 2064 44.33 MSGSRAPNSSGQLSEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLPDQEPDAIVVKSSQLKRKSEVADYEAESTDRAAGPRFTEVVNSPHQTPVSVKGGKGSKSRFTKCSRSGPQTPMSNVGSPSTNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYAGLQAEVENLTMEERGIDEQIREMQERLRDLSEDENNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEAKFEEINAVEVPPSLPSSSGLNEAPATTIVTEDTRGKEIETREQDVHRMCSDLNASQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTEPSVEWNELGTFHEDYSIGNVSSPQTQTPLPNDAPDLPSANPSSS 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3975320 3983268 - XM_039045873.1 Bhi10g00182 46523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00182 462 Pfam E2F transcription factor CC-MB domain 221 321 IPR032198 GO:0046983
Bhi10g00182 462 Pfam E2F/DP family winged-helix DNA-binding domain 142 205 IPR003316 GO:0005667|GO:0006355
Bhi10g00182 462 Gene3D - 212 322 - -
Bhi10g00182 462 MobiDBLite consensus disorder prediction 434 462 - -
Bhi10g00182 462 Coils Coil 225 252 - -
Bhi10g00182 462 Gene3D - 134 207 IPR036388 -
Bhi10g00182 462 MobiDBLite consensus disorder prediction 1 23 - -
Bhi10g00182 462 CDD E2F_DD 216 322 IPR032198 GO:0046983
Bhi10g00182 462 MobiDBLite consensus disorder prediction 90 135 - -
Bhi10g00182 462 SUPERFAMILY E2F-DP heterodimerization region 217 322 IPR037241 -
Bhi10g00182 462 SMART E2F_TDP_2 140 205 IPR003316 GO:0005667|GO:0006355
Bhi10g00182 462 Coils Coil 156 176 - -
Bhi10g00182 462 MobiDBLite consensus disorder prediction 1 53 - -
Bhi10g00182 462 PANTHER TRANSCRIPTION FACTOR E2FB 18 451 - -
Bhi10g00182 462 PANTHER TRANSCRIPTION FACTOR E2F 18 451 IPR015633 GO:0000978|GO:0006357
Bhi10g00182 462 MobiDBLite consensus disorder prediction 109 135 - -
Bhi10g00182 462 SUPERFAMILY Winged helix DNA-binding domain 140 203 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01786 Bhi-Chr3:37668908 Bhi10g00182 Bhi-Chr10:3975320 1.24E-177 dispersed
Bhi03g01787 Bhi-Chr3:37668908 Bhi10g00182 Bhi-Chr10:3975320 8.21E-176 dispersed
Bhi04g00158 Bhi-Chr4:3863848 Bhi10g00182 Bhi-Chr10:3975320 2.73E-80 dispersed
Bhi10g00180 Bhi-Chr10:3975320 Bhi10g00182 Bhi-Chr10:3975320 0 dispersed
Bhi10g00182 Bhi-Chr10:3975320 Bhi02g00388 Bhi-Chr2:7466028 1.03E-10 dispersed
Bhi10g00181 Bhi-Chr10:3975320 Bhi10g00182 Bhi-Chr10:3975320 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2081 PF16421 E2F_CC-MB 1.00E-34 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00182 K06620 - csv:101219318 888.641