Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00190 AGTATATAAAAATTAAGATATATAGTGTCATCGTTTTCATAAAGGAGGAAAAAAAAAAAAATTAAATATAGAAAAATTAAAGCAGAGAGAAAGATTGAGTTCTGACAAGAGAGTTTGAATATATAAGACTGTTACAACTCATCCATTGGAACCCAATTTGTAAAGAAGCAACGTGGGGTAAAGCCCATCAAAGTCAATTATATTCTCTGATACTCACAACCCCCCATCAAAAAAAAAAAAAAAAAAGACGATTTTTCTCTATTTCTTTGTGTTTTTTGGTTGATTGGTCTTTGTTTCTGTTCTGGGTTTTTTATTTTAGAAAGAAAGAAAGAAAAAAATTGTTTTTTTTCCACTTGTGTACGGAGAAAGAACTGACAAATTCTCTGAAAACGCCGCCGACAGCGCCGCCGCAGCTTTTGATTAAGATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCTGACGGAATTCACACTCTTTACCTTATGAACCCAAATTACGTACCTTACTCTGACACCCACTCTCAAACGCCTCCCAATATGCTTTTTCTCAATCCTTCAACTCACGCGCTTAACCCTTCAACTCTTTCCCACGCGCCGCCTTCCAACAACCACTTCGTCGGAATTCCCCTCCCCACCACCGACGCTCCCCGTCCATCCTACCACTACAATCTATGGACTCCTATGGACCAACAAACCGCCCACCACGGAATTTCCGCCGATTCTGCCGATTTGACCTTCCGCCGCCCCACCACGCAACAAGGTTTGTCCTTAAGCCTCTCCTCCCAACAGTCGTTGTACCGGACACTATCGGCTGAGCAGGATATTCAAGGCGGCGGCGGAGGTGGCGGTGGGGGTGGTGCTCTGAGTGGGGATGAAATTCGGGTATCAGGAAATTCGCCGACGTCGGTGTCGGTGGTGTCAAGTGGAATAACGGGGGTTCAAAGTGTGATATTGGGGTCTAAGTACTTGAAAGCGGCTCAAGAACTTTTGGATGAAGTGGTTCATGTTGGTAAAGGAAATTTTAAAACCGACAAAGGGGAGGGGACAAAGGACAAGATGAAGATGAAGAAAGAATCAACGGCCACGATTGGTGGAGACCCTTCCGGCGGCGGCAGTGAAACTACTTCCAAGGCTGCTTCTGAGCTCAGTACTGCTCAAAGACAAGACCTTCAGATGAAAAAAGCTAAGCTTATTGGCATGCTTGATGAGGTAGAACAAAAGTACAGACAGTACCACCAACAAATGCAAGGAGTGGTGAGTTGTTTTGAGCAGGCGGCAGGTTTAGGGTCAGCCAAGTCGTATGCTTCACTTGCACTTGCAACTATTTCGAAGCAATTCCGTTGCTTAAAAGATGCAATTTGTGCACAAATTAAAGCCACAGGGAAAAGCTTAGGAGAAGAAGATAATTGGTTGGGTTCAAAAATTGAAGGCTCTTCAAGATTGAGATACGTTGATCATCATCTAAGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACATAATACTTGGAGACCACAAAGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCCTATCCCAAAGATTCAGACAAGATTATTCTCGCTAAACAAACTGGACTCACTAGGAGTCAGGTATCAAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTTGAGGAAATGTACTTGGAGGAAATCAAAGAGCAAGAACAAAACGGGGACTCCCAAGACATGATTAGAGGATCAGGAGATAATCATCATCATCAGAACAATAACAACAATAATAGTAATAATGATCCACAATATTCCAAGACAGAAAATTTGATGAACAACCACCCTTCCCATTCTTCAATCTCATCATCCTCAATCTTAGGAATAGGATCAACAACAACCGGCGGCTTCAACCTCGTACCGCCATCCTCCGGCAACAACATCCTCTCAAGTCCCAAAAAACCAAGAACCACCACCGCGGCCACCACCACCAGTACAGCCACAAACAACAACAGCAATGCTGTTCATGATCATCATAGGGGTAGTTTTGGTAATTCAAACACATACCCAGTTGGTGAAATTGGCTCAACCTTCAATTCTGAGCTTTTGACTCCAAGGTTTCATGCAAATGGAGTCTCTCTTACTCTTGCCCTTCCTCATAATAATAATTCAGATCATCTCTCTCTTTCAGCCAACCAACCAAATTACCATCACCTATCCTCCAACCCAAATCTTCACTTGGGCAGATCATCAAGGCTTGATATCACCAATCATCATCATCCCGGACCACCTGATTTCTCCGATGTCAATCCCGCTGCCCCGCCGCCTCATTCCGCTTATGATCACGTCGAAATGCAAACCACCAAAAGGTTCGCCGCCCAATTGTTGCCGGATTTTGTCGCCTGAACAACCCAAAGGTTCGCTGCAAATATATATAAAAGCATATACTTGTCAGTATAGGACCATATATTTTTATGTGTATGTATTTATATATATATATATACTTAATTGCTTACTTTCATATTTCATATGGGAACTTAATTTGTATCATATATAAATTTTCGCACA 2597 42.7 MATYFHGGSEIQANSDGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNPSTHALNPSTLSHAPPSNNHFVGIPLPTTDAPRPSYHYNLWTPMDQQTAHHGISADSADLTFRRPTTQQGLSLSLSSQQSLYRTLSAEQDIQGGGGGGGGGGALSGDEIRVSGNSPTSVSVVSSGITGVQSVILGSKYLKAAQELLDEVVHVGKGNFKTDKGEGTKDKMKMKKESTATIGGDPSGGGSETTSKAASELSTAQRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQGVVSCFEQAAGLGSAKSYASLALATISKQFRCLKDAICAQIKATGKSLGEEDNWLGSKIEGSSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQNGDSQDMIRGSGDNHHHQNNNNNNSNNDPQYSKTENLMNNHPSHSSISSSSILGIGSTTTGGFNLVPPSSGNNILSSPKKPRTTTAATTTSTATNNNSNAVHDHHRGSFGNSNTYPVGEIGSTFNSELLTPRFHANGVSLTLALPHNNNSDHLSLSANQPNYHHLSSNPNLHLGRSSRLDITNHHHPGPPDFSDVNPAAPPPHSAYDHVEMQTTKRFAAQLLPDFVA 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4078749 4083198 + XM_039044721.1 Bhi10g00190 46531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00190 669 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 616 - -
Bhi10g00190 669 SMART prehox3 173 317 IPR006563 -
Bhi10g00190 669 SMART HOX_1 367 431 IPR001356 GO:0003677
Bhi10g00190 669 Coils Coil 249 276 - -
Bhi10g00190 669 Pfam Homeobox KN domain 384 423 IPR008422 GO:0003677|GO:0006355
Bhi10g00190 669 MobiDBLite consensus disorder prediction 439 554 - -
Bhi10g00190 669 Gene3D - 370 448 - -
Bhi10g00190 669 Pfam Associated with HOX 178 315 IPR006563 -
Bhi10g00190 669 MobiDBLite consensus disorder prediction 204 221 - -
Bhi10g00190 669 CDD homeodomain 367 428 IPR001356 GO:0003677
Bhi10g00190 669 MobiDBLite consensus disorder prediction 439 455 - -
Bhi10g00190 669 ProSiteProfiles 'Homeobox' domain profile. 364 427 IPR001356 GO:0003677
Bhi10g00190 669 MobiDBLite consensus disorder prediction 604 619 - -
Bhi10g00190 669 MobiDBLite consensus disorder prediction 135 157 - -
Bhi10g00190 669 MobiDBLite consensus disorder prediction 604 648 - -
Bhi10g00190 669 MobiDBLite consensus disorder prediction 204 247 - -
Bhi10g00190 669 MobiDBLite consensus disorder prediction 227 247 - -
Bhi10g00190 669 MobiDBLite consensus disorder prediction 456 554 - -
Bhi10g00190 669 SUPERFAMILY Homeodomain-like 368 433 IPR009057 -
Bhi10g00190 669 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00190 Bhi-Chr10:4078749 Bhi11g02375 Bhi-Chr11:64704119 1.86E-180 dispersed
Bhi11g01922 Bhi-Chr11:54758166 Bhi10g00190 Bhi-Chr10:4078749 5.61E-66 dispersed
Bhi10g00190 Bhi-Chr10:4078749 Bhi10g00191 Bhi-Chr10:4078867 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2082 PF07526 POX 3.90E-47 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00190 - - csv:101220747 1010.36