Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi10g00190 | AGTATATAAAAATTAAGATATATAGTGTCATCGTTTTCATAAAGGAGGAAAAAAAAAAAAATTAAATATAGAAAAATTAAAGCAGAGAGAAAGATTGAGTTCTGACAAGAGAGTTTGAATATATAAGACTGTTACAACTCATCCATTGGAACCCAATTTGTAAAGAAGCAACGTGGGGTAAAGCCCATCAAAGTCAATTATATTCTCTGATACTCACAACCCCCCATCAAAAAAAAAAAAAAAAAAGACGATTTTTCTCTATTTCTTTGTGTTTTTTGGTTGATTGGTCTTTGTTTCTGTTCTGGGTTTTTTATTTTAGAAAGAAAGAAAGAAAAAAATTGTTTTTTTTCCACTTGTGTACGGAGAAAGAACTGACAAATTCTCTGAAAACGCCGCCGACAGCGCCGCCGCAGCTTTTGATTAAGATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCTGACGGAATTCACACTCTTTACCTTATGAACCCAAATTACGTACCTTACTCTGACACCCACTCTCAAACGCCTCCCAATATGCTTTTTCTCAATCCTTCAACTCACGCGCTTAACCCTTCAACTCTTTCCCACGCGCCGCCTTCCAACAACCACTTCGTCGGAATTCCCCTCCCCACCACCGACGCTCCCCGTCCATCCTACCACTACAATCTATGGACTCCTATGGACCAACAAACCGCCCACCACGGAATTTCCGCCGATTCTGCCGATTTGACCTTCCGCCGCCCCACCACGCAACAAGGTTTGTCCTTAAGCCTCTCCTCCCAACAGTCGTTGTACCGGACACTATCGGCTGAGCAGGATATTCAAGGCGGCGGCGGAGGTGGCGGTGGGGGTGGTGCTCTGAGTGGGGATGAAATTCGGGTATCAGGAAATTCGCCGACGTCGGTGTCGGTGGTGTCAAGTGGAATAACGGGGGTTCAAAGTGTGATATTGGGGTCTAAGTACTTGAAAGCGGCTCAAGAACTTTTGGATGAAGTGGTTCATGTTGGTAAAGGAAATTTTAAAACCGACAAAGGGGAGGGGACAAAGGACAAGATGAAGATGAAGAAAGAATCAACGGCCACGATTGGTGGAGACCCTTCCGGCGGCGGCAGTGAAACTACTTCCAAGGCTGCTTCTGAGCTCAGTACTGCTCAAAGACAAGACCTTCAGATGAAAAAAGCTAAGCTTATTGGCATGCTTGATGAGGTAGAACAAAAGTACAGACAGTACCACCAACAAATGCAAGGAGTGGTGAGTTGTTTTGAGCAGGCGGCAGGTTTAGGGTCAGCCAAGTCGTATGCTTCACTTGCACTTGCAACTATTTCGAAGCAATTCCGTTGCTTAAAAGATGCAATTTGTGCACAAATTAAAGCCACAGGGAAAAGCTTAGGAGAAGAAGATAATTGGTTGGGTTCAAAAATTGAAGGCTCTTCAAGATTGAGATACGTTGATCATCATCTAAGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACATAATACTTGGAGACCACAAAGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCCTATCCCAAAGATTCAGACAAGATTATTCTCGCTAAACAAACTGGACTCACTAGGAGTCAGGTATCAAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTTGAGGAAATGTACTTGGAGGAAATCAAAGAGCAAGAACAAAACGGGGACTCCCAAGACATGATTAGAGGATCAGGAGATAATCATCATCATCAGAACAATAACAACAATAATAGTAATAATGATCCACAATATTCCAAGACAGAAAATTTGATGAACAACCACCCTTCCCATTCTTCAATCTCATCATCCTCAATCTTAGGAATAGGATCAACAACAACCGGCGGCTTCAACCTCGTACCGCCATCCTCCGGCAACAACATCCTCTCAAGTCCCAAAAAACCAAGAACCACCACCGCGGCCACCACCACCAGTACAGCCACAAACAACAACAGCAATGCTGTTCATGATCATCATAGGGGTAGTTTTGGTAATTCAAACACATACCCAGTTGGTGAAATTGGCTCAACCTTCAATTCTGAGCTTTTGACTCCAAGGTTTCATGCAAATGGAGTCTCTCTTACTCTTGCCCTTCCTCATAATAATAATTCAGATCATCTCTCTCTTTCAGCCAACCAACCAAATTACCATCACCTATCCTCCAACCCAAATCTTCACTTGGGCAGATCATCAAGGCTTGATATCACCAATCATCATCATCCCGGACCACCTGATTTCTCCGATGTCAATCCCGCTGCCCCGCCGCCTCATTCCGCTTATGATCACGTCGAAATGCAAACCACCAAAAGGTTCGCCGCCCAATTGTTGCCGGATTTTGTCGCCTGAACAACCCAAAGGTTCGCTGCAAATATATATAAAAGCATATACTTGTCAGTATAGGACCATATATTTTTATGTGTATGTATTTATATATATATATATACTTAATTGCTTACTTTCATATTTCATATGGGAACTTAATTTGTATCATATATAAATTTTCGCACA | 2597 | 42.7 | MATYFHGGSEIQANSDGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNPSTHALNPSTLSHAPPSNNHFVGIPLPTTDAPRPSYHYNLWTPMDQQTAHHGISADSADLTFRRPTTQQGLSLSLSSQQSLYRTLSAEQDIQGGGGGGGGGGALSGDEIRVSGNSPTSVSVVSSGITGVQSVILGSKYLKAAQELLDEVVHVGKGNFKTDKGEGTKDKMKMKKESTATIGGDPSGGGSETTSKAASELSTAQRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQGVVSCFEQAAGLGSAKSYASLALATISKQFRCLKDAICAQIKATGKSLGEEDNWLGSKIEGSSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQNGDSQDMIRGSGDNHHHQNNNNNNSNNDPQYSKTENLMNNHPSHSSISSSSILGIGSTTTGGFNLVPPSSGNNILSSPKKPRTTTAATTTSTATNNNSNAVHDHHRGSFGNSNTYPVGEIGSTFNSELLTPRFHANGVSLTLALPHNNNSDHLSLSANQPNYHHLSSNPNLHLGRSSRLDITNHHHPGPPDFSDVNPAAPPPHSAYDHVEMQTTKRFAAQLLPDFVA | 669 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4078749 | 4083198 | + | XM_039044721.1 | Bhi10g00190 | 46531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi10g00190 | 669 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 6 | 616 | - | - | |
Bhi10g00190 | 669 | SMART | prehox3 | 173 | 317 | IPR006563 | - | |
Bhi10g00190 | 669 | SMART | HOX_1 | 367 | 431 | IPR001356 | GO:0003677 | |
Bhi10g00190 | 669 | Coils | Coil | 249 | 276 | - | - | |
Bhi10g00190 | 669 | Pfam | Homeobox KN domain | 384 | 423 | IPR008422 | GO:0003677|GO:0006355 | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 439 | 554 | - | - | |
Bhi10g00190 | 669 | Gene3D | - | 370 | 448 | - | - | |
Bhi10g00190 | 669 | Pfam | Associated with HOX | 178 | 315 | IPR006563 | - | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 204 | 221 | - | - | |
Bhi10g00190 | 669 | CDD | homeodomain | 367 | 428 | IPR001356 | GO:0003677 | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 439 | 455 | - | - | |
Bhi10g00190 | 669 | ProSiteProfiles | 'Homeobox' domain profile. | 364 | 427 | IPR001356 | GO:0003677 | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 604 | 619 | - | - | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 135 | 157 | - | - | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 604 | 648 | - | - | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 204 | 247 | - | - | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 227 | 247 | - | - | |
Bhi10g00190 | 669 | MobiDBLite | consensus disorder prediction | 456 | 554 | - | - | |
Bhi10g00190 | 669 | SUPERFAMILY | Homeodomain-like | 368 | 433 | IPR009057 | - | |
Bhi10g00190 | 669 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 5 | 6 | 616 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi10g00190 | Bhi-Chr10:4078749 | Bhi11g02375 | Bhi-Chr11:64704119 | 1.86E-180 | dispersed | |
Bhi11g01922 | Bhi-Chr11:54758166 | Bhi10g00190 | Bhi-Chr10:4078749 | 5.61E-66 | dispersed | |
Bhi10g00190 | Bhi-Chr10:4078749 | Bhi10g00191 | Bhi-Chr10:4078867 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2082 | PF07526 | POX | 3.90E-47 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi10g00190 | - | - | csv:101220747 | 1010.36 |