Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00203 TCAATTCAGACTGTTGGAGGGAAAAAAAAAAGCGTATATGTATATATGTATATATTTCAAACCAAATCATAATTTTGTTCTTTTTACTGTTGGAATCTTGAACACTGGTTAACAAATTGTGAGATCTTTTGATATTTTTCTCGATAAATCTGCCAAGAAAAGAAAAAAACTGTTTTTAAAAAGTATGTATTTTATGAGGGATTTTTCATCTGGGTTTCTAACCAAACCCTCAGATGTGTACAATTTTGCATTAAAAAAGAGCTGGTATCGTGGCAATTTTGAGAGAAAATTTGAGGTAAGTGTTCCATGCAACAGCATGTTCACACTGGTGACTGTGAGATGTGGGCATTGTTCAAATCTGCTGTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGCCATAAACAGCAGCAGGTGAATGCTGGGGATTCAAGCAAGGACAGAGCTTCTTCTTCTTCTTCTTCTAAATGCACTAAAATTGGCTCTCTTGATTCTGCTGAACGTGACCAACATAGAATCCCTCCTATTCGCCCACCAGAGAAGAGACAGCGTGTTCCTTCGGCGTATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCTAAGAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACGGCAGCTAAAAATTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAAATAAGTTTGAATTTGACCAGAAATCATCACAGTCCATCCAAACTGTCCAATGGGGTTCTGCCACCTGTTAATTCTCTAAAGTTGATGATGATGTGTCAATAGATCATAAAATACTAATAAAACACCCCTTTTTTAAAAATTAATGTGTATTAATTTAGATGCTATTATTAAATTCCAACAAAAAATGAGGTTGATGATCAAGTACTCCTGCCCTGACCCCTCACGTTCTCTATAGGAAAGGAAATTACTTTGATAACCTCACCCCCCCCCATTGTCCTTTATTTATTAATAGGTGTGATGTGATTTTATTCCCCTCTCTCCTTGTTAACAAGTGAGATTAATGAATGATATTACCATATTTATAAATCTA 1108 36.91 MYFMRDFSSGFLTKPSDVYNFALKKSWYRGNFERKFEVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSKCTKIGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTK 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4368026 4373737 - XM_039046403.1 Bhi10g00203 46544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00203 185 MobiDBLite consensus disorder prediction 71 132 - -
Bhi10g00203 185 MobiDBLite consensus disorder prediction 108 125 - -
Bhi10g00203 185 MobiDBLite consensus disorder prediction 71 107 - -
Bhi10g00203 185 Gene3D High mobility group box domain 121 172 IPR036910 -
Bhi10g00203 185 PANTHER AXIAL REGULATOR YABBY 2-RELATED 33 185 - -
Bhi10g00203 185 SUPERFAMILY HMG-box 121 169 IPR036910 -
Bhi10g00203 185 Pfam YABBY protein 37 176 IPR006780 GO:0007275
Bhi10g00203 185 PANTHER PROTEIN YABBY 6-RELATED 33 185 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00203 Bhi-Chr10:4368026 Bhi10g00206 Bhi-Chr10:4368030 1.94E-109 dispersed
Bhi10g00203 Bhi-Chr10:4368026 Bhi10g00204 Bhi-Chr10:4368026 3.21E-136 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2084 PF04690 YABBY 5.60E-61 CL0114 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00203 K25796 - csv:101222154 278.485