Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00204 ATACAGTACTTTCGTTTTCATCTGAAAAGACCAGCAAAATTTGTTCACTTTATTCAATTCAGACTGTTGGAGGGAAAAAAAAAAGCGTATATGTATATATGTATATATTTCAAACCAAATCATAATTTTGTTCTTTTTACTGTTGGAATCTTGAACACTGGTTAACAAATTGTGAGATCTTTTGATATTTTTCTCGATAAATCTGCCAAGAAAAGAAAAAAACTGTTTTTAAAAAGTATGTATTTTATGAGGGATTTTTCATCTGGGTTTCTAACCAAACCCTCAGATGTGTACAATTTTGCATTAAAAAAGAGCTGGTATCGTGGCAATTTTGAGAGAAAATTTGAGGTAAGTGTTCCATGCAACAGCATGTTCACACTGGTGACTGTGAGATGTGGGCATTGTTCAAATCTGCTGTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGCCATAAACAGCAGCAGGTGAATGCTGGGGATTCAAGCAAGGACAGAGCTTCTTCTTCTTCTTCTTCTAAATGCACTAAAATTGGCTCTCTTGATTCTGCTGAACGTGACCAACATAGAATCCCTCCTATTCGCCAGAAGAGACAGCGTGTTCCTTCGGCGTATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCTAAGAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACGGCAGCTAAAAATTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAAATAAGTTTGAATTTGACCAGAAATCATCACAGTCCATCCAAACTGTCCAATGGGGTTCTGCCACCTGTTAATTCTCTAAAGTTGATGATGATGTGTCAATAGATCATAAAATACTAATAAAACACCCCTTTTTTAAAAATTAATGTGTATTAATTTAGATGCTATTATTAAATTCCAACAAAAAATGAGGTTGATGATCAAGTACTCCTGCCCTGACCCCTCACGTTCTCTATAGGAAAGGAAATTACTTTGATAACCTCACCCCCCCCCATTGTCCTTTATTTATTAATAGGTGTGATGTGATTTTATTCCCCTCTCTCCTTGTTAACAAGTGAGATTAATGAATGATATTACCATATTTATAAATCTA 1155 36.45 MYFMRDFSSGFLTKPSDVYNFALKKSWYRGNFERKFEVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSKCTKIGSLDSAERDQHRIPPIRQKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTK 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4368026 4373790 - XM_039046404.1 Bhi10g00204 46545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00204 183 Pfam YABBY protein 37 174 IPR006780 GO:0007275
Bhi10g00204 183 PANTHER PROTEIN YABBY 6-RELATED 33 183 IPR006780 GO:0007275
Bhi10g00204 183 MobiDBLite consensus disorder prediction 71 107 - -
Bhi10g00204 183 Gene3D High mobility group box domain 122 169 IPR036910 -
Bhi10g00204 183 MobiDBLite consensus disorder prediction 108 122 - -
Bhi10g00204 183 SUPERFAMILY HMG-box 123 167 IPR036910 -
Bhi10g00204 183 PANTHER AXIAL REGULATOR YABBY 2-RELATED 33 183 - -
Bhi10g00204 183 MobiDBLite consensus disorder prediction 71 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00204 Bhi-Chr10:4368026 Bhi10g00206 Bhi-Chr10:4368030 5.14E-105 dispersed
Bhi10g00203 Bhi-Chr10:4368026 Bhi10g00204 Bhi-Chr10:4368026 3.21E-136 tandem
Bhi10g00204 Bhi-Chr10:4368026 Bhi10g00205 Bhi-Chr10:4368030 1.53E-99 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2085 PF04690 YABBY 1.50E-56 CL0114 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00204 K25796 - csv:101222154 266.929