Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00205 TAATAAACAGAAAAATAAACCATTATGTAGCTAAAAATTGCCCACTTACATTTTACATTATAGTACTACTTCTCTACTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCGACCAGACTAGTCCCATCCTCATCTTAATTTTTAGATTTTTGTACACATTCTATTTCCCTTCTCTCTAAATAATAATAATAATAATAAAAAAAAGCATCTTTCTCTTCTTTCTCTAACCCCATTTTCTTTTCTCTTTTCCCCTTTCTTCTTCTTCTTCTTCTTCTTCATCATATAGACACAAAACTGAATTTAGGTAAGTGTTCCATGCAACAGCATGTTCACACTGGTGACTGTGAGATGTGGGCATTGTTCAAATCTGCTGTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGCCATAAACAGCAGCAGGTGAATGCTGGGGATTCAAGCAAGGACAGAGCTTCTTCTTCTTCTTCTTCTAAATGCACTAAAATTGGCTCTCTTGATTCTGCTGAACGTGACCAACATAGAATCCCTCCTATTCGCCCACCAGAGAAGAGACAGCGTGTTCCTTCGGCGTATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCTAAGAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACGGCAGCTAAAAATTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAAATAAGTTTGAATTTGACCAGAAATCATCACAGTCCATCCAAACTGTCCAATGGGGTTCTGCCACCTGTTAATTCTCTAAAGTTGATGATGATGTGTCAATAGATCATAAAATACTAATAAAACACCCCTTTTTTAAAAATTAATGTGTATTAATTTAGATGCTATTATTAAATTCCAACAAAAAATGAGGTTGATGATCAAGTACTCCTGCCCTGACCCCTCACGTTCTCTATAGGAAAGGAAATTACTTTGATAACCTCACCCCCCCCCATTGTCCTTTATTTATTAATAGGTGTGATGTGATTTTATTCCCCTCTCTCCTTGTTAACAAGTGAGATTAATGAATGATATTACCATATTTATAAA 1112 36.96 MFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSKCTKIGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTK 141
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4368030 4374482 - XM_039046406.1 Bhi10g00205 46546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00205 141 SUPERFAMILY HMG-box 77 125 IPR036910 -
Bhi10g00205 141 MobiDBLite consensus disorder prediction 64 81 - -
Bhi10g00205 141 MobiDBLite consensus disorder prediction 27 89 - -
Bhi10g00205 141 MobiDBLite consensus disorder prediction 27 63 - -
Bhi10g00205 141 PANTHER AXIAL REGULATOR YABBY 2-RELATED 1 141 - -
Bhi10g00205 141 Gene3D High mobility group box domain 68 127 IPR036910 -
Bhi10g00205 141 Pfam YABBY protein 1 132 IPR006780 GO:0007275
Bhi10g00205 141 PANTHER PROTEIN YABBY 6-RELATED 1 141 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00205 Bhi-Chr10:4368030 Bhi12g00406 Bhi-Chr12:13603558 5.26E-44 dispersed
Bhi10g00204 Bhi-Chr10:4368026 Bhi10g00205 Bhi-Chr10:4368030 1.53E-99 tandem
Bhi10g00205 Bhi-Chr10:4368030 Bhi10g00206 Bhi-Chr10:4368030 2.53E-104 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2086 PF04690 YABBY 2.70E-56 CL0114 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00205 K25796 - csv:101222154 263.848