Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00206 TAATAAACAGAAAAATAAACCATTATGTAGCTAAAAATTGCCCACTTACATTTTACATTATAGTACTACTTCTCTACTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTCGACCAGACTAGTCCCATCCTCATCTTAATTTTTAGATTTTTGTACACATTCTATTTCCCTTCTCTCTAAATAATAATAATAATAATAAAAAAAAGCATCTTTCTCTTCTTTCTCTAACCCCATTTTCTTTTCTCTTTTCCCCTTTCTTCTTCTTCTTCTTCTTCTTCATCATATAGACACAAAACTGAATTTAGATATTTGTGAAGAAAGATTATAAATCAAAGAAATGTCACTGGATATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTAAGTGTTCCATGCAACAGCATGTTCACACTGGTGACTGTGAGATGTGGGCATTGTTCAAATCTGCTGTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGCCATAAACAGCAGCAGGTGAATGCTGGGGATTCAAGCAAGGACAGAGCTTCTTCTTCTTCTTCTTCTAAATGCACTAAAATTGGCTCTCTTGATTCTGCTGAACGTGACCAACATAGAATCCCTCCTATTCGCCCACCAGAGAAGAGACAGCGTGTTCCTTCGGCGTATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCTAAGAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACGGCAGCTAAAAATTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAAATAAGTTTGAATTTGACCAGAAATCATCACAGTCCATCCAAACTGTCCAATGGGGTTCTGCCACCTGTTAATTCTCTAAAGTTGATGATGATGTGTCAATAGATCATAAAATACTAATAAAACACCCCTTTTTTAAAAATTAATGTGTATTAATTTAGATGCTATTATTAAATTCCAACAAAAAATGAGGTTGATGATCAAGTACTCCTGCCCTGACCCCTCACGTTCTCTATAGGAAAGGAAATTACTTTGATAACCTCACCCCCCCCCATTGTCCTTTATTTATTAATAGGTGTGATGTGATTTTATTCCCCTCTCTCCTTGTTAACAAGTGAGATTAATGAATGATATTACCATATTTATAAA 1216 36.76 MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSKCTKIGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTK 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4368030 4374482 - XM_039046405.1 Bhi10g00206 46547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00206 172 PANTHER PROTEIN YABBY 6-RELATED 6 172 IPR006780 GO:0007275
Bhi10g00206 172 MobiDBLite consensus disorder prediction 58 119 - -
Bhi10g00206 172 MobiDBLite consensus disorder prediction 95 112 - -
Bhi10g00206 172 CDD HMGB-UBF_HMG-box 117 153 - -
Bhi10g00206 172 Pfam YABBY protein 7 163 IPR006780 GO:0007275
Bhi10g00206 172 PANTHER AXIAL REGULATOR YABBY 2-RELATED 6 172 - -
Bhi10g00206 172 MobiDBLite consensus disorder prediction 58 94 - -
Bhi10g00206 172 Gene3D High mobility group box domain 108 159 IPR036910 -
Bhi10g00206 172 SUPERFAMILY HMG-box 108 156 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00976 Bhi-Chr2:21993237 Bhi10g00206 Bhi-Chr10:4368030 1.79E-59 dispersed
Bhi06g01929 Bhi-Chr6:53614028 Bhi10g00206 Bhi-Chr10:4368030 6.36E-62 dispersed
Bhi10g00203 Bhi-Chr10:4368026 Bhi10g00206 Bhi-Chr10:4368030 1.94E-109 dispersed
Bhi10g00204 Bhi-Chr10:4368026 Bhi10g00206 Bhi-Chr10:4368030 5.14E-105 dispersed
Bhi10g00206 Bhi-Chr10:4368030 Bhi12g00406 Bhi-Chr12:13603558 7.42E-59 dispersed
Bhi10g00205 Bhi-Chr10:4368030 Bhi10g00206 Bhi-Chr10:4368030 2.53E-104 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2087 PF04690 YABBY 1.30E-74 CL0114 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00206 K25796 - csv:101222154 329.331