Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi10g00208 | AACCCACAAAGAATAGAAAACGTTCGCAAGTGAGGAGCCCGTCTCTATGCGTCGGGGCAGATGACGTGGCATAATACTTTTGTACGACACCCGGCCTTCACCCGCCAGAATCCTCGAGCCATTGCAATCTCCTCCTAGCTTCCAAGGCACGGAGGCCGCCGACGGTCTTCGACCAAGACGAACCAAAAGAGCTCAGTTGAAAGGTGAACTTGTCAGTGGAGTGGCGTTTCTTGCCTTTTGTACTCCGCCTTACATTCTACAATGGCGGACATTAGAAAATGGTTCATGAAAGCACACGATAAAGAGAACGGCAGTGGGTCAAAGAAAGCAAAACCTGCTCCAAGCAACTCAGAGAAATCCGCTACAGCTGAACTACAGTCCGGAAAAACAGGGCTGAGTGGTGGGGAAAGCACTGGCAGACGGATAACTAGCAAGTATTTTGCATCAGAAAAGCAGAAGGCCAATGATACAAAAGAAACAGAGGAATCCCCGATCAAACGAAAGTCTCCACAGGATACTAAGGAATCACCCACCAAAAGAAAGTTTCAAACAGATAATGAGGAATCACCGAAGGCGCTGCCTTTAAAAAAATCAAACAAAATTGATGACGATGCTGTTTTTTCTAGTTCTAGAAAGAACATGTCTGAAGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTGCACAGAAATCTGTAGAAATTGAAGCGAGTGATGATGAGGAAACTAAGGGCACTGATTCTTCTCTGAAGTCTAGTGGAAGGGGTAAGGGGGGAAGAGGTTCATCTGCTACAACCGTTGGTGGTAGAGGCAGAGGTGGTGGACGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTTCGGAGTGTTTAGCTGGTTTAACTTTTGTAATTAGTGGAACCCTTGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGGCGAGTAACTGGATCTGTCAGCAAAAAAACAAATTATCTACTATGTGATGAAGATATTGGTGGCCGAAAATCTTCCAAAGCAAAAGAGCTGGGAACTGGTTTTCTCACTGAGGATGGCTTATTTGACATGATCCGTGCATCAGGCAAAAAAGCTCCTCCAAAGCAACATCCTAAAAAATCTGTGGTTAAGTCCATGGAATCTCCGACAGAGAAAAATTTCCAGAAAGTACAAGCAAAGTCCCGCAAAGATTTGACTGCTGGTGCTTCACCCGCTAAGCAAAAAAGCCGAACAGCTGAATTCTCTAACCTAACATGGACAGAAAAATACAGGCCAAAGGTTCCAAATGACATTATTGGGAATCAGTCACTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAATGAAAACTTCCTAGATGTTGGAAGCAAAAAGAAGGTTAAAAAGCTCAATGATTCTGGTGCCAAAAAAGCTGTATTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTGGTTAGCCAGATGCTTGGTTTTGAGGCTATAGAGGTAAATGCCAGCGACAATCGGGGTAAGTCAGATGCTAAAATTCACAAGGGAATTGGTGGAAGCAATGCAAATTCTATAAAGGAGCTTATCAGCAATGAATCGCTGCATTTCAGAATGAATCAGCCAAAACATCCCAAAACTGTGTTGATCATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCAAGCATTAAAATGTCCAAAATACCAATTATCTGCATCTGTAATGATCGTTACAGCCAGAAGCTGAAAAGCCTCGTGAACTATTGTCTTATTCTCAGCTATAGGAAACCTACAAAACAACAGATGGCAAAACGACTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTAAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCTATGTCAGTTATTAAATATGATGATATTCGCCAACGGCTTCTGAGCAGTATGAAAGATGAAGATATCTCACCATTCACTGCTGTTGATAAGCTGTTTGGTTTTAATTCCGGGAAGTTAAGGATGGATGAACGGATTGACCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGCGCCATTAGTAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCTCGTACAGCTGAATCAATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTCTCTCAAAGTAGTTGTATTGCTTCTTGTGTAATACCAGCTTCATTATTGCATGGGCAAAGAGAAACGCTTGAGCAGGGAGAGCGTAATTTTAATAGATTTGGTGCATGGTTGGGAAAAAATTCAACATCTGGAAAAAATATGAGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCGTCTCGTGAATCCTGTTCAGGGAGGGAACAGCTACGAGTTGAGAACCTTACTCTATTTCTAAAGAGGTTGACTGAGCCACTGCACACGCTGCCTAAGGATGAAGCTGTTAAAATTGTGGTCGAATTTATGAGTCTATATTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCTTTGGATGGCGTGGCCCCTGCAGTCAAGGCTGCTCTAACAAAGGCATACAAAGAAGTTAGCAAGACACACATGGTGCGGGCGGCAGATCTTATTACACTTCCTGGAATGAAAAAGGCCCCTAAGAAACGAATTGCAGCGATCCTAGAACCGACTGAGGATACAGTTGAAGGTGCTGGTGGAGACACATTGGCAGAAAGTGATGAGGAAAACTCTTTGGACAATGAGGGTGCAGACTCCGCAAACGGTGAGAAGCTGCAACTGGAACTTCAAAGCTTGAATAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGTATGGAAAATTCAAGCGCCAAGAAATCCGGTGGCAGAGGACGAGGAGGTAGAAGTTCCCAAGCTTCAGAGAAGAAAGGTGGCGGTCGAGGTTCAGGATCTGCTACAAAGAGGAAAAGATGAAATAAAACGCTTCAAGAACTTCGGGTAATGTTATGTTTACCTTCGTCCTATGCATGCATAAGTTTGCTGGTTAATGTGTTTGAACTGCTAGAAGAATACATAACCTTGTATATGGCACATGTTACATGGGCCTTTTTGACGTACAAGAGAAACATGCTTTTGTATCAACCATTTTGACTTGCAATAGAAATGAGACCAATTCACCCGAAGAACGAGATTCGGTTTTAATGAAATTATTATCGGTTTTTTAGGGC | 3425 | 42.86 | MADIRKWFMKAHDKENGSGSKKAKPAPSNSEKSATAELQSGKTGLSGGESTGRRITSKYFASEKQKANDTKETEESPIKRKSPQDTKESPTKRKFQTDNEESPKALPLKKSNKIDDDAVFSSSRKNMSEVTPNKKLKSGSGKGIAQKSVEIEASDDEETKGTDSSLKSSGRGKGGRGSSATTVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGASECLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPKQHPKKSVVKSMESPTEKNFQKVQAKSRKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKLNDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIHKGIGGSNANSIKELISNESLHFRMNQPKHPKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSYRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAISKDDNGIKRMDLIARTAESIADGDIINVQIRRHRQWQLSQSSCIASCVIPASLLHGQRETLEQGERNFNRFGAWLGKNSTSGKNMRLLEDLHVHILASRESCSGREQLRVENLTLFLKRLTEPLHTLPKDEAVKIVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEVSKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGDTLAESDEENSLDNEGADSANGEKLQLELQSLNKKGMQVQLDLKGMENSSAKKSGGRGRGGRSSQASEKKGGGRGSGSATKRKR | 969 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4454928 | 4467553 | + | XM_039045270.1 | Bhi10g00208 | 46549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 199 | 214 | - | - | |
Bhi10g00208 | 969 | SMART | AAA_5 | 403 | 541 | IPR003593 | - | |
Bhi10g00208 | 969 | CDD | BRCT_RFC1 | 215 | 293 | - | - | |
Bhi10g00208 | 969 | Pfam | Replication factor RFC1 C terminal domain | 680 | 842 | IPR013725 | GO:0003689|GO:0005524|GO:0005663|GO:0006260 | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 64 | 122 | - | - | |
Bhi10g00208 | 969 | Gene3D | - | 612 | 722 | - | - | |
Bhi10g00208 | 969 | SMART | BRCT_7 | 217 | 295 | IPR001357 | - | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 1 | 215 | - | - | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 149 | 164 | - | - | |
Bhi10g00208 | 969 | PANTHER | REPLICATION FACTOR C SUBUNIT 1 | 19 | 940 | - | - | |
Bhi10g00208 | 969 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 351 | 600 | IPR027417 | - | |
Bhi10g00208 | 969 | PIRSF | RFC1 | 1 | 942 | IPR012178 | GO:0003689|GO:0005524|GO:0005663|GO:0006260|GO:0006281 | |
Bhi10g00208 | 969 | CDD | HLD_clamp_RFC | 540 | 598 | - | - | |
Bhi10g00208 | 969 | Gene3D | - | 540 | 610 | - | - | |
Bhi10g00208 | 969 | Pfam | BRCA1 C Terminus (BRCT) domain | 217 | 292 | IPR001357 | - | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 22 | 63 | - | - | |
Bhi10g00208 | 969 | PANTHER | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 | 19 | 940 | - | - | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bhi10g00208 | 969 | Pfam | ATPase family associated with various cellular activities (AAA) | 407 | 519 | IPR003959 | GO:0005524|GO:0016887 | |
Bhi10g00208 | 969 | CDD | AAA | 392 | 533 | - | - | |
Bhi10g00208 | 969 | Gene3D | BRCT domain | 192 | 294 | IPR036420 | - | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 873 | 969 | - | - | |
Bhi10g00208 | 969 | ProSiteProfiles | BRCT domain profile. | 215 | 293 | IPR001357 | - | |
Bhi10g00208 | 969 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 611 | 756 | IPR008921 | GO:0003677|GO:0006260 | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 295 | 343 | - | - | |
Bhi10g00208 | 969 | MobiDBLite | consensus disorder prediction | 909 | 932 | - | - | |
Bhi10g00208 | 969 | Gene3D | - | 351 | 539 | IPR027417 | - | |
Bhi10g00208 | 969 | SUPERFAMILY | BRCT domain | 215 | 294 | IPR036420 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi10g00208 | Bhi-Chr10:4454928 | Bhi10g00210 | Bhi-Chr10:4455153 | 0 | dispersed | |
Bhi10g00207 | Bhi-Chr10:4454928 | Bhi10g00208 | Bhi-Chr10:4454928 | 0 | tandem | |
Bhi10g00208 | Bhi-Chr10:4454928 | Bhi10g00209 | Bhi-Chr10:4454928 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi10g00208 | K10754 | - | csv:101204361 | 1655.96 |