Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00218 AAAATTATAATAACAAAAAAAGAAATAATAATAATAGTTTAAAATATTTTTAAATCACATATTCGTTTTAAAAAAAAAAAAAACAAAAAACAAAAAACGAGGAGGTCGGACCACATCGGCTGGCCCATACTAAAAACCCAAACCAGCCCAATAAAAAAAAAGAGTGAGTAGGCCCAAACTAAATAAACTGGAGCGTTCAGAACTCCAACCTGTCCTCGAAGTACCTATTCAGGCTCCTAACGGCTACAAAATTCCAAATTACAATCAGATGGAAATCTGGCCGTTGGATACGATGTCCATCCAACGATCATCAATTCACAGAAATTAGACCGTTGGGAAGGGCATCGGCTCCGCTCGCAGCTTTAAAGAAGAAACAACAAAGCCATAGAGAGAGTAATCGATCCAGAAACGCAGAGAAAAACAGAACAGTTCTCAGAGCAAAACAAAACGAAAACGATCGTGAAAAGAAAGAAAAAAGAAGGAGAAGAAGAAGAGTGTATGTGATCTACGAAGTGGCGACAAGAAACACTGAAGGAGAGACGCTCAACAGTCGTCTCCAACTTTTTCTTTTCTCTCTGTTTCCAAGTCTTGAAGGAGTTTTCGGCAGTAAGGAAGAATTAATGGCGACTCGAGCTGTTGTTCCTCAGCGACAACTACGAATCAGAGATGAAGGTAAGCCGAAGGTGGTAGCGGCTGAAGGAAGAACAAGACGAATTCTTAAAGATATAGGCAACCTAGTGCCTGATCGCGCTGTAGAAGGGAAGCCCGGACCTCAACCAACAGAGAAGAATAAGGTAACTTTAGTAATGTCTGTCACATTATTCTGTGTTCAAGGAAAAAATAAAAACAAAAGAACAATTCGGTTAAAATCCTCGAGAAAACTTCATTTGCAGAGAGTAATCCCACAAAAGGTGAATGTGGGAGTAGGAAAGGGGGGCAATGTAACGAAGGCTGCAGTAACGGAGCAACCGAAGATTGTACTAAGCTCCGTTGACGAGAGACATATAATCAACATCAAAGATACTAAATCAAGGGACAAGAATAAGAGATCTCTGAGTTCAACCCTTACTGCCAGAAGCAAGGCTGCTTGTGGACTCACCAATAAACCACTAGATTCTTCAGTAGCTAATATTGATGAAGCAGATGCCAACAATGAATTGGCCGTTGTAGAATACATCGACGAAATGTATAAGTTTTACAAGCTTGCAGAAGATGAGATCAAAGTATCAGATTACATGGGAGCACAGCCAGATTTGAATGCTAAGATGAGATCCATTCTCATTGATTGGTTGATAGAAGTTCATCGCAAGTTCGAACTGATGCCAGAAACCCTTTATCTTGCTGTAAACATCGTCGACCGATTCCTTTCCTTGAAGACTGTACCAAGGAAGGAACTTCAATTGGTAGGTATCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGACTTTGTAAGTATATCTGCAAATACTTATCAAAGAGAACAGATTTTGGTGATGGAGAAAGTTATCTTGGGTAGGCTGGAATGGCTTCTAACAGTTCCTACACCTTATGTTTTTCTTGTTCGATATGTCAAGGCTTCTGAGCCATCGGATGATGAGATGGAGAATATGGTCTTTTTTCTGGCCGAGCTTGGTCTGATGAACTATCCAATAGCAATATCATACAGCCCTTCAATGATAGCTTCAGCGGCTGTTTATGCCGCACGATGCACACTTGAAAAGAGCCCTATCTGGACAGCAACTTTGCATCACCATACAGGCTATGTTGAAGAAGAGTTGAAGGAATGTGCAGAACTCCTTGTGAACTTGCACCGTGGAGCTCTAGATTCCAAACTAAAGGCTGTATATAGAAAATATACAAGTCCTGATCGGCGTGCCGTTTCTCTTCTACCTCCAGCTAAAAGTTTAACTCCTGATTGTAGTCCAGAAGTATGAAGAAGTGTAGTGTAGTTTGGGGTTCTTTTTCTATTCTTTTGTATGGGAGATCATTTTGCTGTTAATGATCTCTTTTGGCTATAGCTCTCTGTTGTCTTATTAGAGCTTCTTAATTTTTTTTTTACTCTATATCCTCGAACATTTTCTTACATTTTATGTGAAGAAGAGATCAGGATTTCACTAAATATATTATTTTGTCCTTTGGATGTTGTTCATACTTAAATACTCCAAATTTATTCAAAATGTAACATTGAGAGAGAAAGGGAGAAGCTTTGAACCTTCTTCAAAACAAAGATTGGTTTGGTTTGGGTTCTCTCCTCTCTTTCCCCTCCCCTTTGTGGCCCTTAAAATGTATGGATAACAATAAACTTTTGGATGTTGTTCATACATTTTAAGAAGAGATCAGGATTTCACTAAATATATTTTGTTCTTTTGGATGTTGTTCATACTTAAATACTCCTCCAAATTTATTCAAAATGTAACATTGAGAGAGAAAGAGAGAAGTTTTGAACCTTCTTCAAAACAAAGATTGGTTTGGTTTTTGGGTTCTCTCCTCTCTTTCCCCCCCTCCCCTTTGTGGCCCTTAAAATGTATGGATAACAATAAACTTTTGACTCAGAAAAGAAAAAAATGCATTGAGAGAAAAGAAATTCTCTTACTAATGAACGAGAGAACCC 2635 38.82 MATRAVVPQRQLRIRDEGKPKVVAAEGRTRRILKDIGNLVPDRAVEGKPGPQPTEKNKVTLVMSVTLFCVQGKNKNKRTIRLKSSRKLHLQRVIPQKVNVGVGKGGNVTKAAVTEQPKIVLSSVDERHIINIKDTKSRDKNKRSLSSTLTARSKAACGLTNKPLDSSVANIDEADANNELAVVEYIDEMYKFYKLAEDEIKVSDYMGAQPDLNAKMRSILIDWLIEVHRKFELMPETLYLAVNIVDRFLSLKTVPRKELQLVGISSMLIACKYEEIWAPEVNDFVSISANTYQREQILVMEKVILGRLEWLLTVPTPYVFLVRYVKASEPSDDEMENMVFFLAELGLMNYPIAISYSPSMIASAAVYAARCTLEKSPIWTATLHHHTGYVEEELKECAELLVNLHRGALDSKLKAVYRKYTSPDRRAVSLLPPAKSLTPDCSPEV 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4791626 4795006 + XM_039045025.1 Bhi10g00218 46559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00218 445 SMART Cyclin_C_2 315 434 IPR004367 -
Bhi10g00218 445 Gene3D - 202 313 - -
Bhi10g00218 445 Gene3D - 188 430 - -
Bhi10g00218 445 PANTHER CYCLIN-B1-4 23 436 - -
Bhi10g00218 445 CDD CYCLIN 216 305 IPR013763 -
Bhi10g00218 445 PIRSF Cyclin_A_B_D_E 2 444 IPR039361 -
Bhi10g00218 445 ProSitePatterns Cyclins signature. 217 248 IPR006671 -
Bhi10g00218 445 SMART cyclin_7 222 306 IPR013763 -
Bhi10g00218 445 SMART cyclin_7 319 403 IPR013763 -
Bhi10g00218 445 Pfam Cyclin, C-terminal domain 315 433 IPR004367 -
Bhi10g00218 445 SUPERFAMILY Cyclin-like 316 437 IPR036915 -
Bhi10g00218 445 Pfam Cyclin, N-terminal domain 189 312 IPR006671 -
Bhi10g00218 445 CDD CYCLIN 313 402 IPR013763 -
Bhi10g00218 445 SUPERFAMILY Cyclin-like 177 310 IPR036915 -
Bhi10g00218 445 PANTHER CYCLINS 23 436 IPR039361 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02515 Bhi-Chr3:60490428 Bhi10g00218 Bhi-Chr10:4791626 1.07E-144 dispersed
Bhi05g01991 Bhi-Chr5:61331578 Bhi10g00218 Bhi-Chr10:4791626 6.39E-78 dispersed
Bhi10g00218 Bhi-Chr10:4791626 Bhi09g03255 Bhi-Chr9:83471183 8.66E-57 dispersed
Bhi10g00217 Bhi-Chr10:4791372 Bhi10g00218 Bhi-Chr10:4791626 0 tandem
Bhi10g00218 Bhi-Chr10:4791626 Bhi10g00219 Bhi-Chr10:4791697 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00218 K21777 - csv:101222873 711.449