Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00222 CAAAAGAAAAAACCCAAAAAAGAAAAAAAAAATCCCAAAAAAATGAAATATTGCATTGATGCCCTCGGGCTTACAAGACTGGTAATTTTTCTAGCAGCTTTTGCAGCCATCTTCGCCGTATCGCCGCCGGTTCCGGCCGAAAAGTCGCAATTAGAGGGCTGGTTTTCGGAAAATGTGAAGCCGTTTGCCGATTGTAAGGCGGAACTTGATCCGGCGCTTGTGGCTGCAGAAGAAAACGCCACCGTGGTTAAAGTAAGGGCCGACGGAAGTGGAGATTTCAAGACTGTCACCGAAGCCATTAACAGCGTGCCAGCTGGCAACACCAGACGTGTAGTGATTTGGATTGGAGAAGGAGTTTATAAAGAGAAGCTTAAGATTGATAGAAATAAGCCTTTTGTTACTCTTTATGGGTCTCCTAATAATATGCCTAATTTGACATTTGATGGTGATGCTGCCAAATACGGCACCGTTTATAGTGCTACCTTGATTGTTGAGTCTGATTATTTCGTTGCGGCCAATCTCGTCATCGAGAATTCATCCCCAAGGCCAGATGGGATAAGAAAAGGAGCACAAGCATTAGCAGCTAGACTGATGGGCACAAAAGCCGCAATTTACAATTGCAAATTCATTGGATTTCAAGACACCCTTTGCGATGACGAAGGTTTACATCTCTACAAAGATTGCTTCATTCAGGGCACCGTCGACTTCATTTTTGGAAAGGGAACTTCCCTTTATTTGAACTCTCGGTTAGATGTGGTGGGAGACGGAGGATTGGCAGTGATCACAGCCCATTCAAGAGAAGAAGAATCAGACAGCAGTGGATATTCGTTTGCGCATTGTAGCATTACAGGAACTGGCGGCAAAAACACTTATTTGGGAAGAGCTTGGATGCCTAGATCTAGAGTTGTCTTTGCCTATACAACAATGGCTGATATCATTCATGCTGAGGGCTGGAACGACATGAACCATTCCGGTTACGACGCTACGGTTTTGTTTGGAGAATACAAGTGTTCAGGGCCGGGAGCAGAGCTGAGCGGACGGGTAAAATACAGCAAGCAATTGAGTGACGTAGAAGTGAAGCCGTTCATTAGTCTTGGTTACTTGCAGAGCGAGAAGTGGTTGCTTCCTCCTCCCAATCCTCAAGTTTAG 1149 45.08 MKYCIDALGLTRLVIFLAAFAAIFAVSPPVPAEKSQLEGWFSENVKPFADCKAELDPALVAAEENATVVKVRADGSGDFKTVTEAINSVPAGNTRRVVIWIGEGVYKEKLKIDRNKPFVTLYGSPNNMPNLTFDGDAAKYGTVYSATLIVESDYFVAANLVIENSSPRPDGIRKGAQALAARLMGTKAAIYNCKFIGFQDTLCDDEGLHLYKDCFIQGTVDFIFGKGTSLYLNSRLDVVGDGGLAVITAHSREEESDSSGYSFAHCSITGTGGKNTYLGRAWMPRSRVVFAYTTMADIIHAEGWNDMNHSGYDATVLFGEYKCSGPGAELSGRVKYSKQLSDVEVKPFISLGYLQSEKWLLPPPNPQV 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4973149 4975461 + XM_039046756.1 Bhi10g00222 46563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00222 368 ProSitePatterns Pectinesterase signature 2. 216 225 IPR033131 -
Bhi10g00222 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 361 - -
Bhi10g00222 368 SUPERFAMILY Pectin lyase-like 66 361 IPR011050 -
Bhi10g00222 368 Gene3D - 63 363 IPR012334 -
Bhi10g00222 368 Pfam Pectinesterase 69 354 IPR000070 GO:0030599|GO:0042545
Bhi10g00222 368 PANTHER PECTINESTERASE 63-RELATED 34 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01744 Bhi-Chr2:48145475 Bhi10g00222 Bhi-Chr10:4973149 1.69E-137 dispersed
Bhi09g00783 Bhi-Chr9:17503005 Bhi10g00222 Bhi-Chr10:4973149 2.39E-86 dispersed
Bhi10g00222 Bhi-Chr10:4973149 Bhi02g01951 Bhi-Chr2:52641539 1.61E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00222 K01051 - csv:101205095 619.772