Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00257 ATCTTCTGATTTTCTCGTCAAGAACTTCTGGATCGCGAGTATCGAATATTCTCTGAGCATCCTTTTTCTCCTGGTTCAGAATAATTCTTCAGCATCTCCTTTCTTTTCAAGTTTTGATTTGTGCTGAGCAACTGATTCGGTTCTGTGAAAGATCGGAGGAGAAACCCTCGTGTACTCGCTATGTCTTCCTCCGGAATCTCTATCCAGAGCGCCGAATTGTCAGATGCCGTTCAAGAACTAGTTCTTTGCGACCAGTTGGAAATGTAGATCTTTCTTTTCAGCATCTCCTTTCTTTTCAAGTTTTGATTTGTGCCGAACAACTGTTTGGGTTCTGTGTAATTTAGAGCCATATAGATCGGAGGGTTATGACTTCTTCCGGAATCTCTATCCAGAGCGTTTCAGATGCCGTTCAAGAACAGTTGGAAATGGGAAAGAAGGTAGAGATTCAAGTAACGGGGCATGGGAGTCACGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTGAGAGGCTGCGAGCACGCCTATTGTGCGACTTGCATCCTTCGATGGGCCTCATACACGCAAAAACCAACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATTGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGTTTGCTTTTGAGAGCTTCATGGTATAAACCTCAAATCGTTGAAGAACGGGAGGAAACCTATGATGATCCTGAGGATGATCGGTACTATCCTTATGAGGATGACGATGAAGAGTTGGAGGATGCTTACCTGGGTGTATCACCAAATCTCCGAATCGGAAATCGAAGGTGGGGATTCAATGGTTACGTGAGAGCAGGTAGACAAGAAGCCCGACCAGTTCTTAGGCCACAGTTGGCTGAACCTAGTTCATCGAGGGAGCCCACTTCCAAAGATAAAACAGGCCGACGAGCGAAAAGGGCCTTGAAACGAGAAGCTGCAGATAAAGCAGCAGCAGCTAAGCATCAAGAACATCTAGCTAGGTTTGGCCGGAAGTGATTTTATATTTAAAGCTTCTGTATAGAATAAGCTCTACTCATTTCTCTGTGTACAGGTCTTTGATTCAATTTACTTTTCTAGTTAATGTGCCTTATTAGAGGTTGGTAGCTCCCAATTAAAACTAACTAAGAATGGGGATCATAAATACTTACAAGGTGTAAATGATGCCATCGAATTCATTGTATAAACAATTTGATCTTAGAATCAATCATAAAAGTATTGTTAGCCGTTAGTACCTAGTTTCATGTATTAAAAAATTTAACTCTAGACTCAAAGTCAATTAATAGTTCACTAAACTAGCTGATGAACA 1371 41.58 MTSSGISIQSVSDAVQEQLEMGKKVEIQVTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPQIVEEREETYDDPEDDRYYPYEDDDEELEDAYLGVSPNLRIGNRRWGFNGYVRAGRQEARPVLRPQLAEPSSSREPTSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5826385 5829511 - XM_039045185.1 Bhi10g00257 46598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00257 231 MobiDBLite consensus disorder prediction 192 231 - -
Bhi10g00257 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 87 IPR013083 -
Bhi10g00257 231 ProSiteProfiles Zinc finger RING-type profile. 39 82 IPR001841 -
Bhi10g00257 231 SMART ring_2 39 81 IPR001841 -
Bhi10g00257 231 ProSitePatterns Zinc finger RING-type signature. 57 66 IPR017907 -
Bhi10g00257 231 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 231 - -
Bhi10g00257 231 Pfam Ring finger domain 38 82 IPR001841 -
Bhi10g00257 231 MobiDBLite consensus disorder prediction 177 231 - -
Bhi10g00257 231 SUPERFAMILY RING/U-box 35 89 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00256 Bhi-Chr10:5826087 Bhi10g00257 Bhi-Chr10:5826385 1.19E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00257 - - csv:101206609 358.221