Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi10g00302 | GTGGAGATTATGGTTCGTGCAATCCTTAATGGCTGAATTTAGGTCGAAACGTCAGTCGCCAAATGTAGAAGTGAACGTTTTCTATTGAACGAAGGTATGCAGTCAAAGTCTAAAAGCGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTGGTTATACTGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCCCCGCCAGCAGGAGGAAATTTGTCCAATTCAACGTCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCTTGCTGTTTCTGCTGCGCCTACAGTGCATGGTGGATGTGTCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAAGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAAAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGGTTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCAACAATGAAGGACAAGGACTCCGCTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAGTGGACAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAACCACGGTAGCCAATTTCACAACTACAGTAGCTTCCAAGCTTCTTCATACGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGGACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCAAAAATATGGGGTGCCCCTAGGTTATCTTTGGGGCTGCATTCCCTGGCAGTTTTCTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTTCTTAATCGTAAAGGAGATGGATGATATAAGTTGGCCATTTGGACCCTAGTTCTAGATGCTTCATTCCATCAACCTCTCCCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACAGTGCTCTTTTTAATTTCCAAACCACCTTGCTTAATCGAATGCATAACTGTCATGTACTCGTGAGTGTGTCTAGAACTTTGATCCATAATTTGGTTGCTAATTTCATCAAAGTTTCCTCAGTACCAAATATATTTCTTGCTCTA | 1499 | 44.36 | MQSKSKSVNQLESEPPNMQQTSGYTEPWWRSIGYNHISPPAGGNLSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQLAVSAAPTVHGGCVTQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSASGQAISSHSAGSSGSEAAPCALAETWNSSSGQQEARTQLHEAYEARSYVNHGSQFHNYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAGQRRLAIK | 340 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6542622 | 6547161 | - | XM_039045660.1 | Bhi10g00302 | 46643 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi10g00302 | 340 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 170 | 190 | IPR018362 | GO:0003677|GO:0016602 | |
Bhi10g00302 | 340 | Gene3D | - | 165 | 227 | - | - | |
Bhi10g00302 | 340 | SMART | cbf3 | 164 | 225 | IPR001289 | GO:0003700|GO:0006355 | |
Bhi10g00302 | 340 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Bhi10g00302 | 340 | MobiDBLite | consensus disorder prediction | 225 | 255 | - | - | |
Bhi10g00302 | 340 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 30 | 327 | IPR001289 | GO:0003700|GO:0006355 | |
Bhi10g00302 | 340 | PRINTS | CCAAT-binding transcription factor subunit B signature | 168 | 190 | IPR001289 | GO:0003700|GO:0006355 | |
Bhi10g00302 | 340 | PRINTS | CCAAT-binding transcription factor subunit B signature | 199 | 222 | IPR001289 | GO:0003700|GO:0006355 | |
Bhi10g00302 | 340 | MobiDBLite | consensus disorder prediction | 307 | 340 | - | - | |
Bhi10g00302 | 340 | MobiDBLite | consensus disorder prediction | 205 | 259 | - | - | |
Bhi10g00302 | 340 | MobiDBLite | consensus disorder prediction | 40 | 67 | - | - | |
Bhi10g00302 | 340 | ProSiteProfiles | NF-YA/HAP2 family profile. | 165 | 225 | IPR001289 | GO:0003700|GO:0006355 | |
Bhi10g00302 | 340 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Bhi10g00302 | 340 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 | 30 | 327 | - | - | |
Bhi10g00302 | 340 | MobiDBLite | consensus disorder prediction | 205 | 219 | - | - | |
Bhi10g00302 | 340 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 167 | 222 | IPR001289 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi03g00154 | Bhi-Chr3:3804248 | Bhi10g00302 | Bhi-Chr10:6542622 | 6.43E-40 | dispersed | |
Bhi10g00302 | Bhi-Chr10:6542622 | Bhi10g00304 | Bhi-Chr10:6542622 | 0 | dispersed | |
Bhi10g00302 | Bhi-Chr10:6542622 | Bhi10g00303 | Bhi-Chr10:6542622 | 0 | tandem | |
Bhi02g01538 | Bhi-Chr2:42083024 | Bhi10g00302 | Bhi-Chr10:6542622 | 7.82E-94 | transposed | |
Bhi10g00302 | Bhi-Chr10:6542622 | Bhi09g00646 | Bhi-Chr9:13761457 | 6.09E-57 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2095 | PF02045 | CBFB_NFYA | 1.90E-26 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi10g00302 | K08064 | - | csv:101212961 | 613.994 |