Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00302 GTGGAGATTATGGTTCGTGCAATCCTTAATGGCTGAATTTAGGTCGAAACGTCAGTCGCCAAATGTAGAAGTGAACGTTTTCTATTGAACGAAGGTATGCAGTCAAAGTCTAAAAGCGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTGGTTATACTGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCCCCGCCAGCAGGAGGAAATTTGTCCAATTCAACGTCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCTTGCTGTTTCTGCTGCGCCTACAGTGCATGGTGGATGTGTCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAAGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAAAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGGTTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCAACAATGAAGGACAAGGACTCCGCTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAGTGGACAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAACCACGGTAGCCAATTTCACAACTACAGTAGCTTCCAAGCTTCTTCATACGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGGACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCAAAAATATGGGGTGCCCCTAGGTTATCTTTGGGGCTGCATTCCCTGGCAGTTTTCTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTTCTTAATCGTAAAGGAGATGGATGATATAAGTTGGCCATTTGGACCCTAGTTCTAGATGCTTCATTCCATCAACCTCTCCCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACAGTGCTCTTTTTAATTTCCAAACCACCTTGCTTAATCGAATGCATAACTGTCATGTACTCGTGAGTGTGTCTAGAACTTTGATCCATAATTTGGTTGCTAATTTCATCAAAGTTTCCTCAGTACCAAATATATTTCTTGCTCTA 1499 44.36 MQSKSKSVNQLESEPPNMQQTSGYTEPWWRSIGYNHISPPAGGNLSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQLAVSAAPTVHGGCVTQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSASGQAISSHSAGSSGSEAAPCALAETWNSSSGQQEARTQLHEAYEARSYVNHGSQFHNYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAGQRRLAIK 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6542622 6547161 - XM_039045660.1 Bhi10g00302 46643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00302 340 ProSitePatterns NF-YA/HAP2 subunit signature. 170 190 IPR018362 GO:0003677|GO:0016602
Bhi10g00302 340 Gene3D - 165 227 - -
Bhi10g00302 340 SMART cbf3 164 225 IPR001289 GO:0003700|GO:0006355
Bhi10g00302 340 MobiDBLite consensus disorder prediction 1 28 - -
Bhi10g00302 340 MobiDBLite consensus disorder prediction 225 255 - -
Bhi10g00302 340 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 30 327 IPR001289 GO:0003700|GO:0006355
Bhi10g00302 340 PRINTS CCAAT-binding transcription factor subunit B signature 168 190 IPR001289 GO:0003700|GO:0006355
Bhi10g00302 340 PRINTS CCAAT-binding transcription factor subunit B signature 199 222 IPR001289 GO:0003700|GO:0006355
Bhi10g00302 340 MobiDBLite consensus disorder prediction 307 340 - -
Bhi10g00302 340 MobiDBLite consensus disorder prediction 205 259 - -
Bhi10g00302 340 MobiDBLite consensus disorder prediction 40 67 - -
Bhi10g00302 340 ProSiteProfiles NF-YA/HAP2 family profile. 165 225 IPR001289 GO:0003700|GO:0006355
Bhi10g00302 340 MobiDBLite consensus disorder prediction 1 85 - -
Bhi10g00302 340 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 30 327 - -
Bhi10g00302 340 MobiDBLite consensus disorder prediction 205 219 - -
Bhi10g00302 340 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 167 222 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00154 Bhi-Chr3:3804248 Bhi10g00302 Bhi-Chr10:6542622 6.43E-40 dispersed
Bhi10g00302 Bhi-Chr10:6542622 Bhi10g00304 Bhi-Chr10:6542622 0 dispersed
Bhi10g00302 Bhi-Chr10:6542622 Bhi10g00303 Bhi-Chr10:6542622 0 tandem
Bhi02g01538 Bhi-Chr2:42083024 Bhi10g00302 Bhi-Chr10:6542622 7.82E-94 transposed
Bhi10g00302 Bhi-Chr10:6542622 Bhi09g00646 Bhi-Chr9:13761457 6.09E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2095 PF02045 CBFB_NFYA 1.90E-26 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00302 K08064 - csv:101212961 613.994