Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00305 TAGCTCTTGAATTTGAGTTACCAAAAAGGTCGTTGCTTTTCTCCAATTACTGTGCTCTCTCAGTATGAGAATCGCTCAACAACTGAATTGACTCTTCAATTCTTCTCTTTCTCTTTCTGTTTTTCCTTTTTTCCCAGATTCTCAGCGGGTGTTTCCTGAATCTAGGGCTTTGGATTTCCAGAATTTTCCATCCAAAAGGTATGCAGTCAAAGTCTAAAAGCGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTGGTTATACTGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCCCCGCCAGCAGGAGGAAATTTGTCCAATTCAACGTCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCTTGCTGTTTCTGCTGCGCCTACAGTGCATGGTGGATGTGTCACACAACCTCCTCAGCTTGAACTTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAAGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAAAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGGTTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCAACAATGAAGGACAAGGACTCCGCTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAGTGGACAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAACCACGGTAGCCAATTTCACAACTACAGTAGCTTCCAAGCTTCTTCATACGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGGACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCAAAAATATGGGGTGCCCCTAGGTTATCTTTGGGGCTGCATTCCCTGGCAGTTTTCTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTTCTTAATCGTAAAGGAGATGGATGATATAAGTTGGCCATTTGGACCCTAGTTCTAGATGCTTCATTCCATCAACCTCTCCCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACAGTGCTCTTTTTAATTTCCAAACCACCTTGCTTAATCGAATGCATAACTGTCATGTACTCGTGAGTGTGTCTAGAACTTTGATCCATAATTTGGTTGCTAATTTCATCAAAGTTTCCTCAGTACCAAATATATTTCTTGCTCTA 1588 43.83 MQSKSKSVNQLESEPPNMQQTSGYTEPWWRSIGYNHISPPAGGNLSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQLAVSAAPTVHGGCVTQPPQLELACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSASGQAISSHSAGSSGSEAAPCALAETWNSSSGQQEARTQLHEAYEARSYVNHGSQFHNYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAGQRRLAIK 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6542622 6547792 - XM_039045662.1 Bhi10g00305 46646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00305 335 ProSitePatterns NF-YA/HAP2 subunit signature. 165 185 IPR018362 GO:0003677|GO:0016602
Bhi10g00305 335 MobiDBLite consensus disorder prediction 220 250 - -
Bhi10g00305 335 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 162 217 IPR001289 GO:0003700|GO:0006355
Bhi10g00305 335 ProSiteProfiles NF-YA/HAP2 family profile. 160 220 IPR001289 GO:0003700|GO:0006355
Bhi10g00305 335 SMART cbf3 159 220 IPR001289 GO:0003700|GO:0006355
Bhi10g00305 335 MobiDBLite consensus disorder prediction 302 335 - -
Bhi10g00305 335 MobiDBLite consensus disorder prediction 1 28 - -
Bhi10g00305 335 MobiDBLite consensus disorder prediction 200 254 - -
Bhi10g00305 335 Gene3D - 160 222 - -
Bhi10g00305 335 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 30 322 IPR001289 GO:0003700|GO:0006355
Bhi10g00305 335 MobiDBLite consensus disorder prediction 200 214 - -
Bhi10g00305 335 MobiDBLite consensus disorder prediction 40 67 - -
Bhi10g00305 335 MobiDBLite consensus disorder prediction 1 85 - -
Bhi10g00305 335 PRINTS CCAAT-binding transcription factor subunit B signature 163 185 IPR001289 GO:0003700|GO:0006355
Bhi10g00305 335 PRINTS CCAAT-binding transcription factor subunit B signature 194 217 IPR001289 GO:0003700|GO:0006355
Bhi10g00305 335 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 30 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00305 Bhi-Chr10:6542622 Bhi03g00154 Bhi-Chr3:3804248 1.55E-33 dispersed
Bhi10g00304 Bhi-Chr10:6542622 Bhi10g00305 Bhi-Chr10:6542622 0 tandem
Bhi10g00305 Bhi-Chr10:6542622 Bhi10g00306 Bhi-Chr10:6542622 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2098 PF02045 CBFB_NFYA 1.80E-26 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00305 K08064 - csv:101212961 597.816