Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00331 ATGGGATCCATGAATTCAAACAATTGGCTTTCCTTTCCACTTTCACCCACTAATCCATCTTTACCACCACATCTTCAAACCACAACTCATTCCCATCATTTCTCTTTGGGAAATTTGGAGAATGATCATAATATGGATATCCCATTTCAAACCCACCATGAGTGGAATCTGATAAGTAATCAAAGTGGTGGTGAAGTTCCAAAAATAGCAGATTTTTTAGGAGTAAGCAAGGCAGAAAATGAGACAGATCTCATTGGGTTTAATGAAATTCATCATCATCAGAGCAATGATACAGATTATTTGTTTCCAATCACAAGATTAGTTCCCGTTCATCAACAACAACAACCTACTGCTCCTCTTCCTAATATAAATCTCGATTCTTCTACTAATTTTGACCTTCAAGATAATTCCAACTGTTTGCAATCTTTAACCCTTTCAATGGGCAGTGGCAAACCCTCTACTTGTGAAACAACCTCCACCCCTGACAATAATACCTCCAATACTACTACTAATAATAATAGCAATACCACTCTTGATGTTACTCCTCGAAGAACTTTGGACACTTTTGGCCAAAGAACTTCCATTTATCGTGGTGTCACTAGGCATAGATGGACAGGAAGATATGAAGCACATTTGTGGGATAATAGTTGCAGAAGGGAAGGGCAGTCCAGGAAGGGTCGGCAAGTCTATTTGGGTGGGTATGATAAAGAAGAGAAAGCAGCTAGGGCTTATGATCTTGCTGCATTGAAGTATTGGGGAACATCCACCACCACAAATTTTCCTATTAGTAACTATGAGAAGGAAGTGGAGGAAATGAAGCACATGACAAGACAAGAATTTGTGGCTGCAATTAGAAGGAAGAGTAGTGGGTTTTCAAGGGGTGCATCAATGTATCGTGGAGTTACAAGGCACCACCAGCATGGAAGATGGCAAGCTAGGATTGGAAGAGTAGCAGGAAACAAAGATCTTTATTTGGGAACTTTCAGTACAGAAGAGGAAGCAGCAGAAGCATATGACATAGCAGCGATAAAATTCAGAGGGTTGAACGCGGTGACAAACTTCGACATGAGTCGCTACGACGTGAAAAGCATATTAGAGAGCAACACACTCCCGATCGGTGGCGGTGCGGCGAAGCGGCTAAAAGAGGCTCAAGCCATGGAATCATCTCGAAAACGAGACGAAATGATTGCCCTAGGTTCCTCTTCCTCCTCCTCCTCTTGCTTCCAATATGGAACCTCTTCCTCCTCTACAGCTAATTCCTCCCATTACCCTAATTTACTCCAACAACCAAATCTCAACATAGACCATCACCTTCAAACCCAACCTTTGCTCTCTCTTCAAAACCACCATGACATTTCTCATTACACCCACCATCCCTCCTCATTCCACCACCCTTCTTCTTCTTCTTATATCCACCACTCATCTGATCATTCCCCATATCCTAACAACACTAACCATCCATTTTACGGTGGCGGATATCTTCATAATCATCCCGCTTTACTTCAGGGGATGATCAACATGGGTGGTGGAAGTGGAGGGTATCTTGGGAATGCATTTGGGATGGGTTCTACGTCCAATGGCGGTGGTGCGACAGCGGAGGAATACGCGCTCGTTAAGGTTGACTATGACATGCCTAATTCCGGTGGGTATGGGGGTTGGACCGGGGATACGGTTCAAGGTTCTAACGCTGGGGTTTTCTCTATGTGGAACGATTGATATGTGAT 1724 43.33 MGSMNSNNWLSFPLSPTNPSLPPHLQTTTHSHHFSLGNLENDHNMDIPFQTHHEWNLISNQSGGEVPKIADFLGVSKAENETDLIGFNEIHHHQSNDTDYLFPITRLVPVHQQQQPTAPLPNINLDSSTNFDLQDNSNCLQSLTLSMGSGKPSTCETTSTPDNNTSNTTTNNNSNTTLDVTPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAMESSRKRDEMIALGSSSSSSSCFQYGTSSSSTANSSHYPNLLQQPNLNIDHHLQTQPLLSLQNHHDISHYTHHPSSFHHPSSSSYIHHSSDHSPYPNNTNHPFYGGGYLHNHPALLQGMINMGGGSGGYLGNAFGMGSTSNGGGATAEEYALVKVDYDMPNSGGYGGWTGDTVQGSNAGVFSMWND 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7185763 7188866 + XM_039046818.1 Bhi10g00331 46672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00331 571 CDD AP2 296 357 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 570 - -
Bhi10g00331 571 MobiDBLite consensus disorder prediction 459 483 - -
Bhi10g00331 571 MobiDBLite consensus disorder prediction 454 483 - -
Bhi10g00331 571 Gene3D AP2/ERF domain 297 357 IPR036955 GO:0003700|GO:0006355
Bhi10g00331 571 Gene3D AP2/ERF domain 195 263 IPR036955 GO:0003700|GO:0006355
Bhi10g00331 571 SUPERFAMILY DNA-binding domain 296 357 IPR016177 GO:0003677
Bhi10g00331 571 ProSiteProfiles AP2/ERF domain profile. 195 261 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 SUPERFAMILY DNA-binding domain 194 263 IPR016177 GO:0003677
Bhi10g00331 571 SMART rav1_2 297 361 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 SMART rav1_2 195 267 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 CDD AP2 194 263 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 MobiDBLite consensus disorder prediction 149 179 - -
Bhi10g00331 571 ProSiteProfiles AP2/ERF domain profile. 297 355 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 Pfam AP2 domain 195 253 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 Pfam AP2 domain 298 347 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 PRINTS Ethylene responsive element binding protein signature 196 207 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 PRINTS Ethylene responsive element binding protein signature 337 357 IPR001471 GO:0003700|GO:0006355
Bhi10g00331 571 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 8 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00946 Bhi-Chr6:25822556 Bhi10g00331 Bhi-Chr10:7185763 2.63E-132 dispersed
Bhi09g03195 Bhi-Chr9:81862096 Bhi10g00331 Bhi-Chr10:7185763 6.74E-116 dispersed
Bhi09g03196 Bhi-Chr9:81862096 Bhi10g00331 Bhi-Chr10:7185763 1.79E-115 dispersed
Bhi10g00331 Bhi-Chr10:7185763 Bhi03g01072 Bhi-Chr3:21682667 1.10E-118 dispersed
Bhi10g00331 Bhi-Chr10:7185763 Bhi03g01071 Bhi-Chr3:21679247 1.10E-118 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2103 PF00847 AP2 1.00E-12 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00331 K09285 - csv:101207097 973.385