Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi10g00383 | CTCTTGAGCCTTTCGTTGTTCCAATCTAAGCCCGACACACGGGCCATTCCTTCCTCCACCTCATCACCCACCCTCTGCCTTCTTCTTTTCCTTTTGGGGCCAAACAATTTTGCAATTATTGGGTTGTTCAACGGCGCAAACCTCATTTCCTGCTGTTTTCTGGTCGATCACTCTCACACCCTTCAATTTTTCCATCTGGAATTCAGAGAGAAGGGGATGTATCAGCAGCAGAAGTCAAGGGAAGAACATGCTTTTTCTGCAGCCAGCTTCTGCAAAGAAGTGACTGAGTTGCGCCTTACATCGATAGATTCTCAAGCAGCAACTTCTCGTCCAGAGTTCAAAGGTATCACTTTCAGGAAAGCTTCAACTGGTGGTTTTGCCAGGAGTCGTAATGATGTACACGAGTTACTCGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTGCAAATGGGCACACTCTTTGTTCAAGCTGCAAGGCAAGGATTCAGAACTGTTGCCCTACCTGCCGGCATGAGCTTGGAAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCACTCGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACATGAGAAGAACTGTAAATACCGGCCATACAACTGCCCTTACGCCGGAGGTGAATGTCGTGTAACTGGTGATATTCCATACCTTGTCATGCATCTCAAGGACGATCACGAGGTCGATATGCATGATGGATGTTCCTTCAGCCATAGATACGTCAAATCCAATCCACAAGAAGTTGAAAATGCTACATGGATGCTTACTGTTTTTAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCGTTTCGATTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGATGATGACGATGCAAAACAATTTTCTTACAGTCTGGAAGTTGGTGGAAATGGAAGAAAACTCATTTGGCAAGGTATTCCGAGAAGTATCCGCGATAGCCATCGGAAGGTTCGAGACAGTCACGATGGACTAATCATTCAGAGGAAATTGGCACTATTCTGCTCTGGAAATGAGGGAATGGAACTGAAGCTAAAGGTTACAGGCCGAATATGGAGAGTGAGTTTTTTTCAGAAGCAAAAAGTTGCAGGTGTGTCAGATGAAGAATAAGACAAAGGAGAAAGGAGCGGGAGCGGGGAGCGAGAAAATGAGAGGAAGAATCTGAACAAATGAAATGAAAAATGGAACAAAAGATTGTTGTTGTGTCTTATCAGGATAAGATAAAGGAGCGGGGAGAGGGATTGAGGAGCGTGAGCGGGAGTGAGCAGCTAGAAAGACTATTTTCCTTTTTCCTTCTCCAACAATTTCTAT | 1407 | 44.78 | MYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSRPEFKGITFRKASTGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECRVTGDIPYLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWRVSFFQKQKVAGVSDEE | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8970985 | 8974741 | + | XM_039044457.1 | Bhi10g00383 | 46724 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi10g00383 | 329 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 120 | 175 | IPR013083 | - | |
Bhi10g00383 | 329 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 16 | 313 | - | - | |
Bhi10g00383 | 329 | ProSiteProfiles | Zinc finger RING-type profile. | 67 | 103 | IPR001841 | - | |
Bhi10g00383 | 329 | Pfam | Seven in absentia protein family | 109 | 308 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Bhi10g00383 | 329 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 19 | 119 | IPR013083 | - | |
Bhi10g00383 | 329 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SINAT2-LIKE | 16 | 313 | - | - | |
Bhi10g00383 | 329 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 176 | 308 | IPR008974 | GO:0005515 | |
Bhi10g00383 | 329 | SUPERFAMILY | RING/U-box | 50 | 107 | - | - | |
Bhi10g00383 | 329 | SUPERFAMILY | TRAF domain-like | 120 | 311 | - | - | |
Bhi10g00383 | 329 | ProSiteProfiles | Zinc finger SIAH-type profile. | 120 | 180 | IPR013010 | GO:0008270 | |
Bhi10g00383 | 329 | CDD | RING-HC_SIAHs | 65 | 103 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi10g00383 | Bhi-Chr10:8970985 | Bhi10g00385 | Bhi-Chr10:8971258 | 0 | dispersed | |
Bhi10g00383 | Bhi-Chr10:8970985 | Bhi10g00384 | Bhi-Chr10:8971014 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi10g00383 | K04506 | - | csv:101213438 | 650.973 |