Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00383 CTCTTGAGCCTTTCGTTGTTCCAATCTAAGCCCGACACACGGGCCATTCCTTCCTCCACCTCATCACCCACCCTCTGCCTTCTTCTTTTCCTTTTGGGGCCAAACAATTTTGCAATTATTGGGTTGTTCAACGGCGCAAACCTCATTTCCTGCTGTTTTCTGGTCGATCACTCTCACACCCTTCAATTTTTCCATCTGGAATTCAGAGAGAAGGGGATGTATCAGCAGCAGAAGTCAAGGGAAGAACATGCTTTTTCTGCAGCCAGCTTCTGCAAAGAAGTGACTGAGTTGCGCCTTACATCGATAGATTCTCAAGCAGCAACTTCTCGTCCAGAGTTCAAAGGTATCACTTTCAGGAAAGCTTCAACTGGTGGTTTTGCCAGGAGTCGTAATGATGTACACGAGTTACTCGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTGCAAATGGGCACACTCTTTGTTCAAGCTGCAAGGCAAGGATTCAGAACTGTTGCCCTACCTGCCGGCATGAGCTTGGAAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCACTCGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACATGAGAAGAACTGTAAATACCGGCCATACAACTGCCCTTACGCCGGAGGTGAATGTCGTGTAACTGGTGATATTCCATACCTTGTCATGCATCTCAAGGACGATCACGAGGTCGATATGCATGATGGATGTTCCTTCAGCCATAGATACGTCAAATCCAATCCACAAGAAGTTGAAAATGCTACATGGATGCTTACTGTTTTTAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCGTTTCGATTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGATGATGACGATGCAAAACAATTTTCTTACAGTCTGGAAGTTGGTGGAAATGGAAGAAAACTCATTTGGCAAGGTATTCCGAGAAGTATCCGCGATAGCCATCGGAAGGTTCGAGACAGTCACGATGGACTAATCATTCAGAGGAAATTGGCACTATTCTGCTCTGGAAATGAGGGAATGGAACTGAAGCTAAAGGTTACAGGCCGAATATGGAGAGTGAGTTTTTTTCAGAAGCAAAAAGTTGCAGGTGTGTCAGATGAAGAATAAGACAAAGGAGAAAGGAGCGGGAGCGGGGAGCGAGAAAATGAGAGGAAGAATCTGAACAAATGAAATGAAAAATGGAACAAAAGATTGTTGTTGTGTCTTATCAGGATAAGATAAAGGAGCGGGGAGAGGGATTGAGGAGCGTGAGCGGGAGTGAGCAGCTAGAAAGACTATTTTCCTTTTTCCTTCTCCAACAATTTCTAT 1407 44.78 MYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSRPEFKGITFRKASTGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECRVTGDIPYLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWRVSFFQKQKVAGVSDEE 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8970985 8974741 + XM_039044457.1 Bhi10g00383 46724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00383 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 175 IPR013083 -
Bhi10g00383 329 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 16 313 - -
Bhi10g00383 329 ProSiteProfiles Zinc finger RING-type profile. 67 103 IPR001841 -
Bhi10g00383 329 Pfam Seven in absentia protein family 109 308 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bhi10g00383 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 119 IPR013083 -
Bhi10g00383 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINAT2-LIKE 16 313 - -
Bhi10g00383 329 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 176 308 IPR008974 GO:0005515
Bhi10g00383 329 SUPERFAMILY RING/U-box 50 107 - -
Bhi10g00383 329 SUPERFAMILY TRAF domain-like 120 311 - -
Bhi10g00383 329 ProSiteProfiles Zinc finger SIAH-type profile. 120 180 IPR013010 GO:0008270
Bhi10g00383 329 CDD RING-HC_SIAHs 65 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00383 Bhi-Chr10:8970985 Bhi10g00385 Bhi-Chr10:8971258 0 dispersed
Bhi10g00383 Bhi-Chr10:8970985 Bhi10g00384 Bhi-Chr10:8971014 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00383 K04506 - csv:101213438 650.973