Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00385 TTGTTCGATTTCGTAGTTGTTAGATGATTGTATGACTACCGTAGAATTCAGAGAGAAGGGGATGTATCAGCAGCAGAAGTCAAGGGAAGAACATGCTTTTTCTGCAGCCAGCTTCTGCAAAGAAGTGACTGAGTTGCGCCTTACATCGATAGATTCTCAAGCAGCAACTTCTCGTCCAGAGTTCAAAGGTATCACTTTCAGGAAAGCTTCAACTGGTGGTTTTGCCAGGAGTCGTAATGATGTACACGAGTTACTCGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTGCAAATGGGCACACTCTTTGTTCAAGCTGCAAGGCAAGGATTCAGAACTGTTGCCCTACCTGCCGGCATGAGCTTGGAAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCACTCGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACATGAGAAGAACTGTAAATACCGGCCATACAACTGCCCTTACGCCGGAGGTGAATGTCGTGTAACTGGTGATATTCCATACCTTGTCATGCATCTCAAGGACGATCACGAGGTCGATATGCATGATGGATGTTCCTTCAGCCATAGATACGTCAAATCCAATCCACAAGAAGTTGAAAATGCTACATGGATGCTTACTGTTTTTAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCGTTTCGATTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGATGATGACGATGCAAAACAATTTTCTTACAGTCTGGAAGTTGGTGGAAATGGAAGAAAACTCATTTGGCAAGGTATTCCGAGAAGTATCCGCGATAGCCATCGGAAGGTTCGAGACAGTCACGATGGACTAATCATTCAGAGGAAATTGGCACTATTCTGCTCTGGAAATGAGGGAATGGAACTGAAGCTAAAGGTTACAGGCCGAATATGGAGAGTGAGTTTTTTTCAGAAGCAAAAAGTTGCAGGTGTGTCAGATGAAGAATAAGACAAAGGAGAAAGGAGCGGGAGCGGGGAGCGAGAAAATGAGAGGAAGAATCTGAACAAATGAAATGAAAAATGGAACAAAAGATTGTTGTTGTGTCTTATCAGGATAAGATAAAGGAGCGGGGAGAGGGATTGAGGAGCGTGAGCGGGAGTGAGCAGCTAGAAAGACTATTTTCCTTTTTCCTTCTCCAACAATTTCT 1250 44.0 MTTVEFREKGMYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSRPEFKGITFRKASTGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECRVTGDIPYLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWRVSFFQKQKVAGVSDEE 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8971258 8974739 + XM_039044456.1 Bhi10g00385 46726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00385 339 Pfam Seven in absentia protein family 119 318 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bhi10g00385 339 ProSiteProfiles Zinc finger SIAH-type profile. 130 190 IPR013010 GO:0008270
Bhi10g00385 339 SUPERFAMILY TRAF domain-like 130 321 - -
Bhi10g00385 339 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 186 318 IPR008974 GO:0005515
Bhi10g00385 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 185 IPR013083 -
Bhi10g00385 339 ProSiteProfiles Zinc finger RING-type profile. 77 113 IPR001841 -
Bhi10g00385 339 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 26 323 - -
Bhi10g00385 339 SUPERFAMILY RING/U-box 60 117 - -
Bhi10g00385 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 129 IPR013083 -
Bhi10g00385 339 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINAT2-LIKE 26 323 - -
Bhi10g00385 339 CDD RING-HC_SIAHs 75 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00383 Bhi-Chr10:8970985 Bhi10g00385 Bhi-Chr10:8971258 0 dispersed
Bhi10g00385 Bhi-Chr10:8971258 Bhi10g00387 Bhi-Chr10:8971291 0 dispersed
Bhi10g00384 Bhi-Chr10:8971014 Bhi10g00385 Bhi-Chr10:8971258 0 tandem
Bhi10g00385 Bhi-Chr10:8971258 Bhi10g00386 Bhi-Chr10:8971291 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00385 K04506 - csv:101213438 665.996