Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00441 ATGATTTGGAGTGGATAGATATGAAGAAATGATGTAAAGGTGAAATGGGTAAAAGGGATAATAACGATCATGTTCATGTTAGGAGAAGGTGCTTTGTCTTCTTCCAATAATCTATCTATCAATCTATTGCCTAATAAGTCCAGTGGTTGAGCAGGTGAGCTCAAGCTTCTCTGTCTTCTGCTTCTGTTCTCCAGAATTTGGCCTTTCAGCAATCTCAGGGGTCGTTAATTTCTTTTCTCAAGCGGCTACATAATTTCTCTTCCTCATCCTCACTGTCTGAGAGAGTTTATACTTCAAATTTGTATTCGTTTTTCCAATTTGCTCCACATTTGAACCTGCATAAGCTGTTGGTTCGCAAAGTTTAAGGACTGCTGCGCACTTTTTGTTGAGTTGAAGAAAGAGCATTAGAAGATTTTACATCCATGAGAAGATCAGGTGTAAACCAACCGAAAGTCAAGCGTCTTGTTGGAAAATATGAAATTGGTCGAACAATTGGCGAAGGTACATTTGCAAAAGTGAAATTTGCCAAAAATTCGGAGACTGGGGAACATGTAGCAATAAAGATCCTTGACAAAGAGAAAGTTCTGAAGCACAAGATGGCTGAACAGATCAAGCGGGAAATTGCCACAATGAAACTAATAAAGCATCCACATGTTGTCCAATTGTTTGAGGTGATGGGGAGCAAAACAAAGATATTTATTGTTTTGGAGTTTGTTACTGGAGGAGAACTTTTTGATAAAATTGTTAGTACTCCATTTCTGAAGAAAAAAGTAAATCATGGACGGATGAGTGAAAATGAGGCACGGAGATATTTCCAGCAACTTATAAATGCTGTTGATTATTGTCATAGCAGAGGTGTTTACCACAGGGATCTTAAGCCAGAAAATCTATTGTTAGATGCCTACGGTAATCTTAAAGTGTCTGATTTTGGATTGAGTGCACTTTCTCAACAAGTGAAGGATGATGGCCTGCTTCACACTACTTGTGGAACTCCAAACTATGTTGCTCCTGAGGTTCTTAATGATAGAGGCTACGACGGTGCAACTGCAGACTTATGGTCTTGTGGAGTTATACTCTTTGTACTGCTTGCAGGTTACTTGCCGTTTGATGATTCTAATCTCATCAACCTTTATAAAAAGATCTCGTCTGCTGAATTTACTTGTCCTCCGTGGCTTTCTTTAGATGCCATGAAATTGATAGCTCGAATTTTGGATCCCAACCCAATGACTCGCATCACTATACCAGAAATTTTGGAAGATGAATGGTTTAAGAAAGATTATAAGCCTCCTGTTTTTGAGGAGCAGAAGATTGCAAACTTGGATGATGTAGAAGCTGTCTTTAAAGATTCGGAAGAGCACCATGTGACAGAGAAGAAGGAAGAACACCCAGCAGCTATGAATGCCTTCGAGTTAATTTCAATGTCGAAGGGGCTCAACTTGGCAAATTTGTTTGGTACAGAACAGGAATTCAAGAGAGAAACAAGGTTCACCTCTAAATGCACAGCTAATGAAATTGTAAATAAGATTGAAGAAGCTGCCAAACCTCTTGGTTTTGATGTACAAAAGAAAAATTACAAGATGAGGCTTGAAAATGTGAAAGCTGGTCGGAAGGGAAATCTTAATGTTGCCACAGAGATTTTGCAAGTAGCACCTTCTGTCCATGTGGTTGAGATGCGAAAAGCAAAGGGAGACACTTTAGAGTTTCACAAGTTCTACAAAAACCTCTCCACCTCCTTGGAGGATGTTGTTTGGAAGACTGAGGAAGACATGCAAGAAACAAAGTGAAACTCAACGCAGTTCGAATTACGAAGAACAAATTCTTGTAAATGCTTCATGACTGCTGTTTCCTTAACCCTCAATTCTCATGTGTTCAATCGATTGTTTTCCATTTTATTGTAGGAAAGCATGTAAAAAGCTCCCAGAAAATGAGCTATGATAGATGTTTTTGATCTTACACTTAAAACTTGGATTCTCAGTGATAGCCAGGAATATTTGCAATTCTTTTTAGGTATTATATGCTTCCATTAGTATTTCAAACA 2038 38.52 MRRSGVNQPKVKRLVGKYEIGRTIGEGTFAKVKFAKNSETGEHVAIKILDKEKVLKHKMAEQIKREIATMKLIKHPHVVQLFEVMGSKTKIFIVLEFVTGGELFDKIVSTPFLKKKVNHGRMSENEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLLAGYLPFDDSNLINLYKKISSAEFTCPPWLSLDAMKLIARILDPNPMTRITIPEILEDEWFKKDYKPPVFEEQKIANLDDVEAVFKDSEEHHVTEKKEEHPAAMNAFELISMSKGLNLANLFGTEQEFKRETRFTSKCTANEIVNKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEILQVAPSVHVVEMRKAKGDTLEFHKFYKNLSTSLEDVVWKTEEDMQETK 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10041541 10052370 + XM_039044647.1 Bhi10g00441 46782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00441 453 Pfam Protein kinase domain 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi10g00441 453 PANTHER - 7 446 - -
Bhi10g00441 453 CDD CIPK_C 326 440 - -
Bhi10g00441 453 Pfam NAF domain 322 381 IPR004041 GO:0007165
Bhi10g00441 453 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 446 - -
Bhi10g00441 453 CDD STKc_SnRK3 17 281 - -
Bhi10g00441 453 Gene3D Phosphorylase Kinase; domain 1 7 97 - -
Bhi10g00441 453 SMART serkin_6 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi10g00441 453 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Bhi10g00441 453 SUPERFAMILY Protein kinase-like (PK-like) 14 312 IPR011009 -
Bhi10g00441 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Bhi10g00441 453 Gene3D Kinase associated domain 1, KA1 319 444 - -
Bhi10g00441 453 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Bhi10g00441 453 Gene3D Transferase(Phosphotransferase) domain 1 99 289 - -
Bhi10g00441 453 ProSiteProfiles Protein kinase domain profile. 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00441 Bhi-Chr10:10041541 Bhi10g00443 Bhi-Chr10:10041545 0 dispersed
Bhi10g00441 Bhi-Chr10:10041541 Bhi10g00442 Bhi-Chr10:10041542 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88230 PF00069 Pkinase 2.00E-70 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00441 - - csv:101221173 872.848