Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00491 ATTTTCAGAATTTCCACCAAGAATGCAATTTAATTTCCAAAGCCCGTTGCCTATTGAAACACTTCACAGTGACATCTTCAACCTGAAAACTACTTAATTGCCCTCCTTCAGAGAGTATACCTTTCTAGAACTGATTCTTTCATTAAATTACTCCTCCGTCCTCGCTGCATCGCGCTCGTACTCCTCTCAATCGCTGGCGCACGCTCATGAATGATTTGATTGTACGGTGTAATTGCAGTTTAGGAAAAGGAAGAGGGAAAAGAAACAGAGACAGAAAAAAAGTATAGAGAAATTCGATATCGAGTGGGGGAGTGCGGCGGACAGGGGCGGTTCGTTGGTGGCTTTTTCAAATGGTATATGATGCTTTGCAATTCATTGAGAGATCGACTTCGGCCATGGCTTCGTGATTATGACAGGCTTCAGTCTTTCGCAGTCATTCTCATTTATATTCAGATCGGGTGCGCATTGATTGGATCCCTTGGGGCATTGTACAATGGTGTTTTGCTTATAAATTTGGCGATCGCATTGTTCGCTTTGGTAGCGATAGAGAGCAGCAGTCAGAGTCTTGGTCGTACATATGCTGTTCTCCTGTTCTCTGCGATTTTCCTCGACGTCTTCTGGTTTATTCTTTTCGCCTATGACACATGGAACTTCTCATCCGAGCAATATGGATCCCTTTTTACCTTTTCAGTGAAGCTTACTCTGGCTATGCAGATTATTGGATTTTCTGTTAGGTTATCTTCTTCACTACTGTGGATTCAAATTTACAGGCTGGGGATTTCATACATGGAAACTTCAGTTCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTTCTTAGCCCGGCTACACCTGTTGTAGTTAGACAACCATCAGGTTCTGACGATATGATAGGGGGCTCCATCTATGATCCAAGTTATTACTCGTCTCTATTTGATGATGGTCAAGATAGTAAATGTTTGTCTGGGGTAATGTATCAATTTTTTTATATCTCCCATTTCGGTAATGGTGATAATGGTTCTACCTCTGGGCCAGATGTATCTCGATCAAAGCTGTCTAGACATTTCCAAGTAGCAGATTCTTTGTAGGATGAGTATGCAGATGGAAATCAGCTGCAGACGGTTTAGAGCATTGAGTTAGTGAATCTGTTGATTATTTACTCGTGTTATTTTGATGTCACAAATATCGTCGTTTACGACTAGCTACTCAGTACTCAGGTGCGGCTGGTTAATGTAGATCGATGTTGTACAGCTTCACATTACTAGGTATAATTCTTTTGTCGAGGATAAAATTTTTTCATCGAAGGAAGTTCCTGGAACGTCCGGCTGTGTTGAGTAAAAGCGATGCGTTGGCTTTGACGTCTAAATGGGGAAACAAGTTCAATAAAAAGAACTGACTTTCACTCTATTCCCGAATTCCGTAGATAAAAGGGTCGGTTAGATCTTGGAGCGGAAGAAATCTATGGCACAAGGAAACACATTTTTTTATTATAATATTTTCAAATTTTGGGGATATTGTGGAAATTAACCTAGCTTATAAGGTGAACTACAGTTTGTTTTTATTATATTTTAATAATGTCTCGTGGATCTCATCTGAATGCGTCTCTTCAATACTCATTTTTTTTAAAAGAAAAATATTCTTCCAATAA 1649 39.78 MMLCNSLRDRLRPWLRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVLLINLAIALFALVAIESSSQSLGRTYAVLLFSAIFLDVFWFILFAYDTWNFSSEQYGSLFTFSVKLTLAMQIIGFSVRLSSSLLWIQIYRLGISYMETSVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPSYYSSLFDDGQDSKCLSGVMYQFFYISHFGNGDNGSTSGPDVSRSKLSRHFQVADSL 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11056258 11095895 + XM_039045881.1 Bhi10g00491 46832

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00491 243 PANTHER OS07G0223700 PROTEIN 1 235 - -
Bhi10g00491 243 PANTHER OS07G0223700 PROTEIN 1 235 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00491 - - - csv:101215314 437.187
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00491 Bhi-Chr10:11056258 Bhi10g00493 Bhi-Chr10:11056261 8.57E-169 dispersed
Bhi10g00491 Bhi-Chr10:11056258 Bhi10g00492 Bhi-Chr10:11056259 2.64E-176 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g3 . . . . Bpe01g00409 . Bma14g00744 . . . . . . . . Cpe05g00576 . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe08g00340 . . Bma11g00387 Sed01g3430 . . . . . . . . Bhi10g00491 Tan07g0561 Cmetu05g1769 . Hepe08g0006 . . Cla03g01411 Cam03g1491 Cec03g1529 Cco03g1523 Clacu03g1514 Cmu03g2071 Cre03g1743 . . . .
Vvi6g11 . . . . Bpe01g00363 . . . . . . . . . . Cpe05g00569 . . . . . . . . Cla02g02369 Cam02g2520 Cec02g2568 Cco02g2597 Clacu02g2494 Cmu02g2425 Cre02g2744 . . Cone18ag0005 Cone11ag1588 . . Chy05g00001 Cme05g00001 . . . . Bpe08g00327 . Bma07g00318 Bma11g00346 Sed01g3430 Cmo02g01193 Cmo20g00003 Cma02g01159 Cma20g00003 Car02g00959 Car20g00001 . . Bhi10g00491 Tan07g0561 Cmetu05g1769 . Hepe08g0006 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004096 1 4 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 3 3 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi10g00491 Bhi_Chr10 FPKM 17.973333 25.91601 15.545906 17.803577 15.738182 18.370901 13.938056 9.975009 5.125471 7.077739