Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00520 CTTTTTTTTCATAGAAAACTAAGTCCACCGCTCTGATTTCCCCAACCCCATCTCTCCCTTCCCCCATTTTTCAGCTCACCAATAATGAAACCCACCACTTGCAATACCAATGGCCACGTTCCCGTCGCCGATGGCCTTTGCCTGAAGTCGAACGATCCATTGTACTGGGGCGCCGCCGCGGAGGGTCTCAAAGGGAGCCACCTCGACGAGGTGAAGAAAATGGTGGGTGAGTACCGGCGAGGGGTGGTCCGACTCGGCGGAGAGAGCTTGACGATTGGGCAGGTGGCGGCGGTGGCGTTGCACGACGGCGGAGTGAAGGTGGAGCTGAATGAGTCGGCGAGAGAGGGAGTGAAGGCAAGCAGTGACTGGGTGATGGAGAGTATGGTGAAAGGGACGGATAGTTATGGAGTCACTACTGGATTTGGTGCAACCTCTCATCGGAGAACCAATCAAGGAGCTGCTCTGCAGAAGGAGCTTATTCGATTCTTGAACGCTGGAATATTTGGGAATGGAATAGAGTCCAACCACACATTGCCTCACACTGCCACAAGAGCTGCCATGTTGGTCAGAATCAACACTCTTCTCCAAGGCTATTCTGGCATTAGATTTGAGATTTTGGAGTCAATTACAAAGCTCCTAAATCACAACGTCACACCTTGCCTTCCCTTGCGAGGCACAATTACGGCTTCTGGTGATTTAGTTCCCTTCTCCTACATTGCTGGCTTTTTGACAGGTCGTCCCAATGCCAAGGCTGTCGGTCCAACCGGTGATCTCCTTGATGCTGGAGCTGCTTTTAAACTTGCTGGCATCGATGGTGGATTCTTCGAGTTGCAGCCTAAAGAGGGTCTCGCACTTGTCAACGGGACGGGCGTTGGATCTGGTTTGGCGTCCATAGTTTTGTTCGAGGCTAATGTATTAGCTCTCTTATCTGAGGTCATTTCAGCTATCTTTGCTGAAATAATGCAGGGAAAGCCTGAGTTTACTGATCATTTGACTCATAAATTGAAGCATCATCCGGGTCAAATCGAAGCAGCAGCTATAATGGAGCACCTTTTAGATGGAAGTGCTTTCATAAAAGATGCTAAGAAGTTACATGAATTGGACCCTCTTCAAAAGCCAAAACAAGATCGTTATGCTCTTCGGACTTCACCTCAATGGTTAGGCCCTCAAATTGAAGTTATTCGACATTCGACGAAATCAATTGAGAGAGAAATTAACTCGGTGAATGACAATCCATTAATTGACGTTTCAAGGAATAAAGCTCTACATGGAGGAAATTTTCAAGGAACTCCAATTGGGGTGTCCATGGATAACACTAGATTGGCTCTTGCCTCAATTGGAAAGCTTTTATTTGCTCAATTCTCTGAACTTGTGAATGATTTCTACAACAATGGTCTGCCTTCAAATCTTTCAGGAGGAAGTAATCCAAGTTTGGATTATGGATTCAAAGGCGCTGAAATCGCCATGGCTTCCTATTGCTCGGAACTGCAATACTTAGCAAACCCGGTCACCAATCACGTTCAAAGTGCAGAGCAACACAACCAAGACGTCAATTCATTGGGTCTAATCTCCTCAAGAAAAACAGCTGAGGCAATAGATATCTTGAAGCTAATGAGCACAACATTCCTAGTGGCTCTCTGCCAAGCCATAGATTTGAGACACATCGAGGAAAATCTGAAGAGCACCGTGAAGAACACAGTGAGTCAAGTGGCCAAGAAGGTTTTGACCGTTGGAGTAAATGGAGAGCTTCATCCTTCAAGATTTTGTGAGAAAGATTTGCTGAAAGTCATTGATAGAGAACATGTGTTTGCTTACGTTGACGATCCATGCAGCATGACATATCCTTTAATGCAGAAGCTAAGGCAAGTTCTTGTAGAACATGCATTGAACAACAATGACGATCTAAAGAACTCAAACTCCTCAATCTTTCTAAAGATTGGAGCTTTTGAGGAAGAACTGAAAACCCTTTTGCCCAAAGAAGTAGAAAGTGGAAGACAAGCCATTGCAAAAGGAATACCAATAATCCCCAATAAGATAAAGGACTGCAGATCATACCCACTTTACAGATTTGTTAGAGAAGAATTGGGAACTGCTATTTTGACAGGTGAAAAAGTGAAATCTCCCGGTGAAGAATTTGACAAGGTTTTTACTGCAATTTGTGAGGGGAAAATTATTGATCCTTTGCTTGAATGCCTTGAGAGTTGGAATGGGACTCCGCTTCCTATAAATTAGAAACTGTCAGTGGAAAAACCACTGTCCTGTGGCCTCTGTTCTTGTGCATTGTTATTATTCTCTCTTCTTCTTCCTTTTTTTTTTTTCCCTTTTTGTTTGTAATCAATCGACTGTCTTCAACTGTTGCCAAATCCAACTACTTTTCTTCTATTTCTACTGTATGTTTCTGTAAAGAAGTTTTGGCTTTGTATGCAAAATCATTTGTGGTTGGGACCATGGATGCTGCAGTTTCCAAATCTAAA 2474 44.06 MKPTTCNTNGHVPVADGLCLKSNDPLYWGAAAEGLKGSHLDEVKKMVGEYRRGVVRLGGESLTIGQVAAVALHDGGVKVELNESAREGVKASSDWVMESMVKGTDSYGVTTGFGATSHRRTNQGAALQKELIRFLNAGIFGNGIESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNHNVTPCLPLRGTITASGDLVPFSYIAGFLTGRPNAKAVGPTGDLLDAGAAFKLAGIDGGFFELQPKEGLALVNGTGVGSGLASIVLFEANVLALLSEVISAIFAEIMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHLLDGSAFIKDAKKLHELDPLQKPKQDRYALRTSPQWLGPQIEVIRHSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSGGSNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSTTFLVALCQAIDLRHIEENLKSTVKNTVSQVAKKVLTVGVNGELHPSRFCEKDLLKVIDREHVFAYVDDPCSMTYPLMQKLRQVLVEHALNNNDDLKNSNSSIFLKIGAFEEELKTLLPKEVESGRQAIAKGIPIIPNKIKDCRSYPLYRFVREELGTAILTGEKVKSPGEEFDKVFTAICEGKIIDPLLECLESWNGTPLPIN 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11679864 11684618 - XM_039045034.1 Bhi10g00520 46861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00520 715 Gene3D - 528 649 IPR023144 -
Bhi10g00520 715 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 4 715 - -
Bhi10g00520 715 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 24 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bhi10g00520 715 Pfam Aromatic amino acid lyase 62 537 IPR001106 -
Bhi10g00520 715 Gene3D - 16 261 IPR024083 -
Bhi10g00520 715 PANTHER HISTIDINE AMMONIA-LYASE 4 715 IPR001106 -
Bhi10g00520 715 CDD PAL-HAL 60 525 IPR001106 -
Bhi10g00520 715 Gene3D Fumarase/aspartase (Central domain) 263 709 - -
Bhi10g00520 715 SUPERFAMILY L-aspartase-like 24 714 IPR008948 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01585 Bhi-Chr3:33485244 Bhi10g00520 Bhi-Chr10:11679864 0 dispersed
Bhi03g01586 Bhi-Chr3:33493520 Bhi10g00520 Bhi-Chr10:11679864 0 dispersed
Bhi04g01349 Bhi-Chr4:34032716 Bhi10g00520 Bhi-Chr10:11679864 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00520 K10775 - csv:101218156 1355.5