Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00533 AAAAAAAAAATACTTTAAATAATATTTTTAAAAAATCCAAAAGAAGCATCTTCTTCCATTTTCATGAAACTTTTTTAGACCCATTCTCTGTTTTGGACTCTCTCTAGACGCATGGAAGCACTTCTTCTTGCCCATTTCCCCATTTCATTCAAATTCTGAGTTTCAACCCCTCATTTCGGCTAGAAGAACAACAAGCCCTTCTCTTCATGCTCTGAAACAGGTTAACTCCATTATAACTGCAGCCAAAGTTTTCATTTGGGAATATCTTTATGGCTTATGGTAATTCTAGATCCATAAGGTTCCAAGATGATCTCGAATCGTCTGCCCTGCCTACTATCAATGGTGGCAGTGTCACAAAGATCATATATAACATTGATGGCACACAAATACCGGAATCGAGCAGCAAGAGAACTGTGGCTTCTAGGAAGTCTGGAAGATCCCTGAGAGCTAAAGTTTTGTCTAGAGTTTTCTCAGAAGATTATGAGAGAGTACAAAGAAAAATATTGGATCCTAGGGGACAAGTCATAAGGCGATGGAATAAGATATTTTTAGTTGCTTGTTTAGTCTCTTTGTTTGTAGACCCTCTTTTCTTTTACCTGCCTGTGGTCAGGGATGAGGTGTGCATCGATATAGGAGTAGGTCTTGAAGTCGTCCTCACAACTATAAGATCAATAGCTGATGTTTTCTACACAATTCAGATTTTCATTAAGTTCCGTACAGCTTATGTTGCGCCCTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTTATAGATCCTTGTAAGATAGCAATAAGGTATCTACGCCATGGTTTCTGGATTGATCTCATTGCAGCCGTGCCAGTTCCACAGGTACTGATCTGGATTGTCATTCCCAACCTTAGTGGTTCAACAATGACGAACACCAAGAACTTCCTAAGGTTCTTCCTCATATTCCAGTACCTCCCAAGGCTTTTTCTCATATTTCCTCTCTCAACACAAATTGTTAAGGCCACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACCTGATTCTTTATATGTTGGCAAGCCATGTTTTAGGAGCCTGCTGGTACCTTCTTTCAATTGAGCGTCAAGAAGCATGCTGGAGAAGACTTTGTATGTTTGACAAATCTTGTACAGATGGATTCTTCGACTGTCATAAGGTCGATAACCCTCAAAGGGACTCGTGGTTTAATAAGAGCAACATTAAAAGTTCATGCAATCCAAATGGTTCCTTTTATCAATTCGGTATATATGGTGATGCAATAACTTTCCATGTCACAACCTCAGCATTTTTCAACAAGTACTTCTACTGTCTTTGGTGGGGCCTGAAAAATCTCAGTTCCTTGGGACAAAATCTTGCCACAAGCACTTTTGTTGGGGAAATAATTTTTGCCATTATTGTGGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGTAATATGCAGAAATACCTCCAATCAACAACGGTTCGATTAGAAGAGTGGAGAATAAGGAGAACTGATACGGAACAATGGATGCATCACAGGCAACTACCTCCAGAGCTCAGACAATCTGTCCGCAGATATGATCAGTATAAGTGGGTAGCAACTCGAGGAGTCGATGAAGAAGTGTTGCTTAGAAGCCTTCCCTTGGATCTCCGAAGAGACATAAAACGTCACCTTTGCCTTGACCTCGTTCGAAGGGTTCCATTGTTTGATCAAATGGACGAAAGAATGCTAGATGCAATATGCGAGAGACTTAAACCTGCCTTGAGCACAGAAGGCACATTTCTCGTGCGAGAAGGCGACCCCGTCAATGAAATGCTATTCATAATCAGAGGTCATCTCGACTCATACACCACTAATGGTGGTAGAACTGGGTTTTTCAACTCCTGTCGTATTGGCCCAGGTGATTTCTGTGGTGAGGAGCTGCTGACTTGGGCTCTCGACCCTCGTCCAAGTGTTGTACTTCCTTCTTCCACTCGCACAGTCAAAGCCATCTCTGAGGTAGAAGCATTTGCTCTCATAGCAGAGGACTTGAAATTTGTATCCTCCCAGTTCAGAAGACTACACAGCAAACAACTGAGACACAAGTTTCGATTCTACTCGCATCAATGGCGAACATGGGCTGCATGCTTTGTTCAAGCAGCATGGCGGAGATATAAGAGACGCAAAGAGCGAGCTGAGCTCAGGGCTAGAGAGAGTTATCCAGCTACCAAAGTTGAGTCCCCGCTTTCACCACCAACGACATCAAACTTGGATTCACGCCCAGGAAACGCTAGAAGGGGATTGAATAAGCGTTGTGTGTCGGATGCTGGTGTCGTAAGCTCGTTGCAGAAGCCAGAAGAGCCTGACTTCTCCATCGTCGAGGAATAAAGTGATTGATCAAAGCTCGGCTGAAAAACCAGCAACTTTAGTCTGTACAGGTGGGGTGTGAATGGTGAAGCTATACTACTATTGGTTGTTCCGTGTAAAATGAAAGTTTGCTCAAGAAAATTTGATGTGGGGATTTTTGTTGACCTTTTTTTTTTGTTAGGATGTGGTGTTAGTGTAACACCGTGCAAAAACCAGGGAAAATAGCTCAAAGAGATGTATGAATGATGTAAAGCAGCACAATAAGTTTCTATAATTTGTATGTTAAGTGTTGTGATCGGGTTTGATTAACTTCTTAAACTCCATGTTTGAAGTTTTACA 2690 42.04 MAYGNSRSIRFQDDLESSALPTINGGSVTKIIYNIDGTQIPESSSKRTVASRKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQVIRRWNKIFLVACLVSLFVDPLFFYLPVVRDEVCIDIGVGLEVVLTTIRSIADVFYTIQIFIKFRTAYVAPSSRVFGRGELVIDPCKIAIRYLRHGFWIDLIAAVPVPQVLIWIVIPNLSGSTMTNTKNFLRFFLIFQYLPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRRLCMFDKSCTDGFFDCHKVDNPQRDSWFNKSNIKSSCNPNGSFYQFGIYGDAITFHVTTSAFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIIFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEEVLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKERAELRARESYPATKVESPLSPPTTSNLDSRPGNARRGLNKRCVSDAGVVSSLQKPEEPDFSIVEE 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11868789 11873127 + XM_039046894.1 Bhi10g00533 46874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00533 700 SMART cnmp_10 480 611 IPR000595 -
Bhi10g00533 700 Gene3D Helix hairpin bin 407 471 - -
Bhi10g00533 700 CDD CAP_ED 480 611 IPR000595 -
Bhi10g00533 700 Gene3D Jelly Rolls 478 598 IPR014710 -
Bhi10g00533 700 MobiDBLite consensus disorder prediction 651 667 - -
Bhi10g00533 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 699 - -
Bhi10g00533 700 SUPERFAMILY Voltage-gated potassium channels 80 402 - -
Bhi10g00533 700 SUPERFAMILY cAMP-binding domain-like 410 605 IPR018490 -
Bhi10g00533 700 ProSiteProfiles cAMP/cGMP binding motif profile. 480 577 IPR000595 -
Bhi10g00533 700 Pfam Ion transport protein 89 407 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bhi10g00533 700 PANTHER - 4 699 - -
Bhi10g00533 700 Gene3D - 84 404 - -
Bhi10g00533 700 MobiDBLite consensus disorder prediction 642 673 - -
Bhi10g00533 700 PRINTS EAG/ELK/ERG potassium channel family signature 144 153 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi10g00533 700 PRINTS EAG/ELK/ERG potassium channel family signature 261 271 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi10g00533 700 PRINTS EAG/ELK/ERG potassium channel family signature 349 366 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi10g00533 700 PRINTS EAG/ELK/ERG potassium channel family signature 375 386 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi10g00533 700 PRINTS EAG/ELK/ERG potassium channel family signature 393 402 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi10g00533 700 PRINTS EAG/ELK/ERG potassium channel family signature 443 450 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01696 Bhi-Chr3:35644759 Bhi10g00533 Bhi-Chr10:11868789 0 dispersed
Bhi08g01983 Bhi-Chr8:57161718 Bhi10g00533 Bhi-Chr10:11868789 1.14E-143 dispersed
Bhi10g00533 Bhi-Chr10:11868789 Bhi11g01665 Bhi-Chr11:48031866 0 dispersed
Bhi10g00533 Bhi-Chr10:11868789 Bhi12g00625 Bhi-Chr12:19116777 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00533 K05391 - csv:101210775 1362.44