Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00537 TCCAGGGTTCCCTCTTCATCCCGCGATACGATACGAATCCAATCCAACCAAAAAATTAAACATAAAAAAGCTCCTCTCTTTCTTTCCCCTTTCCTTGTTTTCTCGTTTTCCTTTGTCCATTTTCAGATTGTTTGTTTGGTTGTTTTGTTTGCTTCCTTCCTTGGCTTCAACCAACACCCCTCGCCATTTGGGATCTAAACACATTACCCCCATTCTCCTTTTTGCCCCCTTTCCCCCCTTTCTCTTGAATGCTTCAGAAGAACAACAAGCTGGGAAGGATTTGCTCTTTTCACTCCGACTCAGATTGCCTCACTTGGAAGTTTTCTTTCAAATTTCATTTTCTGGCTTCTCTTTTGACTTTCAATTGCTTTCTTCTTTTCAATCAAGGAAGCTGTATTATTGGTTACGAACAAAAACTGGGTTCAGAGGGTTTACATTTGGGGGAAAACGCAGTCATTCGAATGAAAGAAGCAGAGAAAAATTTAGATCCTCAACTATGGCATGCCTGTGCCGGAGGTATGGTCCAGATGCCGGCGATTAACTCCAAGGTTTTCTACTTCCCTCAGGGTCACGCCGAGCATGCTCAGGCCACCGTCGATTTCACCTCTTCACTCAGAATCCCGCCTCTTATTCCTTGTCGAGTGCTCGCCGTTAAGTTCTTGGCTGACCATGAAACGGATGAGGTTTTTGCGAATATAAGAATGGTTCCCCTGCCGAACAACGACATCAATTTCGAAGACGAGGGTGGGTTTGGGAGTAATGGGTCTGAGAATAATATGGAGAAACCGGCTTCCTTTGCCAAGACGTTGACTCAATCTGATGCCAATAACGGCGGTGGGTTTTCCGTTCCGAGGTACTGTGCGGAGACTATTTTTCCGCGGCTGGATTACACGGCGGATCCGCCGGTTCAGACGGTAATTGCCAAGGATGTTCACGGCGAGGTTTGGAAGTTCCGCCATATTTACAGAGGGACGCCTCGCCGGCATTTGTTGACTACTGGGTGGAGTACTTTTGTGAATCAGAAGAAGCTCGTCGCTGGCGATTCGATTGTTTTTCTAAGATCCAAAAATGGCGACCTTTGTGTTGGAATCCGGCGAGCCAAACGGGCAATTGGGTGTGCCGCCGATCACCCGTACGGATGGAATCCCGGCGGTGGAAATTGCATCCCACCTTACGGTGGATTGACGATGTTTTTGAGAGATGATGACAATAAGTTGAGTAGAAAAGGGTCTTTGAGTTCCAGTGGTGGTGGTGGGAATTTGAGGGGAAAAGGTAAAGTGAGGCCGGAATCAGTGATGGAAGCGGCGGCGCTTGCGGCGAGCGGGCAGCCGTTTGAGGTGGTTTATTACCCACGTGCCAGCACGCCGGAGTTCTGTGTTAAGGCCTCATCGGTGCGAGCCGCCATGAGGATCCAATGGTGTTCTGGTATGAGGTTCAAGATGCCATTTGAGACAGAGGATTCTTCTCGGATTAGTTGGTTTATGGGCACCATTTCTTCTGTTCAAGTTGCTGATCCTATCCGTTGGCCTAATTCTCCATGGCGGCTTCTTCAGGTGACATGGGATGAACCAGATTTGCTACAGAATGTGAAGCGTGTTAGCCCATGGTTAGTTGAACTGGTATCAAACATGCCCGTCATTCAACTATCACCATTTTCTCCACCGAGAAAGAAATTTCGACTACCACAACACCCAGACTTTCCCCTCGACGGCCAATTCCCACTGTCTTCGTTTTCGAGCAATACCCTTAGGCCAAGCAGTCCCATGTGTTGTTTATCTGATAACACTTCTGTAGGCATACAGGGAGCCAGGCATACTCAATTTGGAATATCTTTATCAGATTTCCATCTCAACAACAAACTGCAATTAGGGCTGGTTCCATCCAGTTTTCAGCAGCTTGATTTTCACTCTAGGATTTCCAATAGATCAGTAACAGACCACAGAGATAGCAGCAGTCAGAACTCATCAGCGTTGCTAAACGGGGAAAAGACTGGTCCAAAGTTGGAAAGATCCGATTCGGTGAAGAAGCATCAGTTTTTACTCTTTGGTCAACCTATACTCACTGAACAGCAAATCACTTGCAGCTCTTCCGGCGACATTCGTTCACCTCGGACAGAGAAAAGCTCCTTGGATATGAATTTGGAGAGAGTGAAGTTTCTTTCTAATAACTCAGGATCCACTACCAAGCAGCAAATTTCTCCAAACAAGTCATCAGGAGTAGGATTTCCATGGTACCAGGGTTATCAAGCCACTGAACTCGGCCTAGACACCGGTCACTGCAAGGTATTTATGGAGTCAGAAGATGTGGGCCGGACACTCAACCTTTCAGTCATTGGCTCATATGAAGAACTATACAGGAGGCTTGCGAATATGTTCGGTATGGAAAAACCAGACATTCTAATTAGCCATGTACTGTACCAAGATGCAACAGGTGCTGTGAAACAAGCTGGTGATAAACCATTCAGCTAGAAGACTGACGATACTAACGGACTCGGGTTCTGACAAGCTGGGAAGGACATTGATGGATGGAATGAGAAGTGGTGAAAATGGATTGGATGCTTCAAACAGGACTGGCCCTTTGAGCATATTTGCCTAGCGCCTACCT 2604 46.81 MLQKNNKLGRICSFHSDSDCLTWKFSFKFHFLASLLTFNCFLLFNQGSCIIGYEQKLGSEGLHLGENAVIRMKEAEKNLDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIPPLIPCRVLAVKFLADHETDEVFANIRMVPLPNNDINFEDEGGFGSNGSENNMEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCAADHPYGWNPGGGNCIPPYGGLTMFLRDDDNKLSRKGSLSSSGGGGNLRGKGKVRPESVMEAAALAASGQPFEVVYYPRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIQLSPFSPPRKKFRLPQHPDFPLDGQFPLSSFSSNTLRPSSPMCCLSDNTSVGIQGARHTQFGISLSDFHLNNKLQLGLVPSSFQQLDFHSRISNRSVTDHRDSSSQNSSALLNGEKTGPKLERSDSVKKHQFLLFGQPILTEQQITCSSSGDIRSPRTEKSSLDMNLERVKFLSNNSGSTTKQQISPNKSSGVGFPWYQGYQATELGLDTGHCKVFMESEDVGRTLNLSVIGSYEELYRRLANMFGMEKPDILISHVLYQDATGAVKQAGDKPFS 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11941988 11945628 + XM_039046262.1 Bhi10g00537 46878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00537 739 Gene3D - 181 285 IPR015300 -
Bhi10g00537 739 ProSiteProfiles PB1 domain profile. 674 739 IPR000270 GO:0005515
Bhi10g00537 739 Pfam B3 DNA binding domain 183 284 IPR003340 GO:0003677
Bhi10g00537 739 Pfam Auxin response factor 352 435 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi10g00537 739 MobiDBLite consensus disorder prediction 563 578 - -
Bhi10g00537 739 SUPERFAMILY DNA-binding pseudobarrel domain 178 287 IPR015300 -
Bhi10g00537 739 MobiDBLite consensus disorder prediction 558 587 - -
Bhi10g00537 739 Gene3D - 390 463 - -
Bhi10g00537 739 MobiDBLite consensus disorder prediction 323 343 - -
Bhi10g00537 739 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 73 738 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi10g00537 739 Gene3D - 673 739 - -
Bhi10g00537 739 ProSiteProfiles B3 DNA-binding domain profile. 183 285 IPR003340 GO:0003677
Bhi10g00537 739 SMART B3_2 183 285 IPR003340 GO:0003677
Bhi10g00537 739 CDD B3_DNA 182 283 IPR003340 GO:0003677
Bhi10g00537 739 PANTHER AUXIN RESPONSE FACTOR 73 738 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00710 Bhi-Chr4:17101903 Bhi10g00537 Bhi-Chr10:11941988 2.95E-111 dispersed
Bhi10g00537 Bhi-Chr10:11941988 Bhi10g00539 Bhi-Chr10:11941992 0 dispersed
Bhi10g00537 Bhi-Chr10:11941988 Bhi10g00538 Bhi-Chr10:11941991 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2108 PF02362 B3 1.40E-21 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00537 - - bhj:120088819 1478.38