Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00538 AGGGTTCCCTCTTCATCCCGCGATACGATACGAATCCAATCCAACCAAAAAATTAAACATAAAAAAGCTCCTCTCTTTCTTTCCCCTTTCCTTGTTTTCTCGTTTTCCTTTGTCCATTTTCAGATTGTTTGTTTGGTTGTTTTGTTTGCTTCCTTCCTTGGCTTCAACCAACACCCCTCGCCATTTGGGATCTAAACACATTACCCCCATTCTCCTTTTTGCCCCCTTTCCCCCCTTTCTCTTGAATGCTTCAGAAGAACAACAAGCTGGGAAGGATTTGCTCTTTTCACTCCGACTCAGATTGCCTCACTTGGAAGTTTTCTTTCAAATTTCATTTTCTGGCTTCTCTTTTGACTTTCAATTGCTTTCTTCTTTTCAATCAAGGAAGCTGTATTATTGGTTACGAACAAAAACTGGGTTCAGAGGGTTTACATTTGGGGGAAAACGCAGTCATTCGAATGAAAGAAGCAGAGAAAAATTTAGATCCTCAACTATGGCATGCCTGTGCCGGAGGTATGGTCCAGATGCCGGCGATTAACTCCAAGGTTTTCTACTTCCCTCAGGGTCACGCCGAGCATGCTCAGGCCACCGTCGATTTCACCTCTTCACTCAGAATCCCGCCTCTTATTCCTTGTCGAGTGCTCGCCGTTAAGTTCTTGGCTGACCATGAAACGGATGAGGTTTTTGCGAATATAAGAATGGTTCCCCTGCCGAACAACGACATCAATTTCGAAGACGAGGGTGGGTTTGGGAGTAATGGGTCTGAGAATAATATGGAGAAACCGGCTTCCTTTGCCAAGACGTTGACTCAATCTGATGCCAATAACGGCGGTGGGTTTTCCGTTCCGAGGTACTGTGCGGAGACTATTTTTCCGCGGCTGGATTACACGGCGGATCCGCCGGTTCAGACGGTAATTGCCAAGGATGTTCACGGCGAGGTTTGGAAGTTCCGCCATATTTACAGAGGGACGCCTCGCCGGCATTTGTTGACTACTGGGTGGAGTACTTTTGTGAATCAGAAGAAGCTCGTCGCTGGCGATTCGATTGTTTTTCTAAGATCCAAAAATGGCGACCTTTGTGTTGGAATCCGGCGAGCCAAACGGGCAATTGGGTGTGCCGCCGATCACCCGTACGGATGGAATCCCGGCGGTGGAAATTGCATCCCACCTTACGGTGGATTGACGATGTTTTTGAGAGATGATGACAATAAGTTGAGTAGAAAAGGGTCTTTGAGTTCCAGTGGTGGTGGTGGGAATTTGAGGGGAAAAGGTAAAGTGAGGCCGGAATCAGTGATGGAAGCGGCGGCGCTTGCGGCGAGCGGGCAGCCGTTTGAGGTGGTTTATTACCCACGTGCCAGCACGCCGGAGTTCTGTGTTAAGGCCTCATCGGTGCGAGCCGCCATGAGGATCCAATGGTGTTCTGGTATGAGGTTCAAGATGCCATTTGAGACAGAGGATTCTTCTCGGATTAGTTGGTTTATGGGCACCATTTCTTCTGTTCAAGTTGCTGATCCTATCCGTTGGCCTAATTCTCCATGGCGGCTTCTTCAGGTGACATGGGATGAACCAGATTTGCTACAGAATGTGAAGCGTGTTAGCCCATGGTTAGTTGAACTGGTATCAAACATGCCCGTCATTCAACTATCACCATTTTCTCCACCGAGAAAGAAATTTCGACTACCACAACACCCAGACTTTCCCCTCGACGGCCAATTCCCACTGTCTTCGTTTTCGAGCAATACCCTTAGGCCAAGCAGTCCCATGTGTTGTTTATCTGATAACACTTCTGTAGGCATACAGGGAGCCAGGCATACTCAATTTGGAATATCTTTATCAGATTTCCATCTCAACAACAAACTGCAATTAGGGCTGGTTCCATCCAGTTTTCAGCAGCTTGATTTTCACTCTAGGATTTCCAATAGATCAGTAACAGACCACAGAGATAGCAGCAGTCAGAACTCATCAGCGTTGCTAAACGGGGAAAAGACTGGTCCAAAGTTGGAAAGATCCGATTCGGTGAAGAAGCATCAGTTTTTACTCTTTGGTCAACCTATACTCACTGAACAGCAAATCACTTGCAGCTCTTCCGGCGACATTCGTTCACCTCGGACAGAGAAAAGCTCCTTGGATATGAATTTGGAGAGAGTGAAGTTTCTTTCTAATAACTCAGGATCCACTACCAAGCAGCAAATTTCTCCAAACAAGTCATCAGGAGTAGGATTTCCATGGTACCAGGGTTATCAAGCCACTGAACTCGGCCTAGACACCGGTCACTGCAAGGTATTTATGGAGTCAGAAGATGTGGGCCGGACACTCAACCTTTCAGTCATTGGCTCATATGAAGAACTATACAGGAGGCTTGCGAATATGTTCGGTATGGAAAAACCAGACATTCTAATTAGCCATGTACTGTACCAAGATGCAACAGGTGCTGTGAAACAAGCTGGTGATAAACCATTCAGTGATTTCATCAAAACAGCTAGAAGACTGACGATACTAACGGACTCGGGTTCTGACAAGCTGGGAAGGACATTGATGGATGGAATGAGAAGTGGTGAAAATGGATTGGATGCTTCAAACAGGACTGGCCCTTTGAGCATATTTGCCTAGCGCCTACCTTTCCTGATTATAGGGGGAATGAATCCAACAAATGTATCTGCTCCAGAATTCTGCTTGTTTACTGGGAAAATAGACTCTTGAGATCTTCAATCATTTTATTAATCATGTTTTTGTCTTACTATGCATCATCATCAAATGCAACTGTCTATAATATATCTAACTGGATCTTGTTTGATGCCTAATGTTATTCATATTTTCCTTTTTA 2823 45.55 MLQKNNKLGRICSFHSDSDCLTWKFSFKFHFLASLLTFNCFLLFNQGSCIIGYEQKLGSEGLHLGENAVIRMKEAEKNLDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIPPLIPCRVLAVKFLADHETDEVFANIRMVPLPNNDINFEDEGGFGSNGSENNMEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCAADHPYGWNPGGGNCIPPYGGLTMFLRDDDNKLSRKGSLSSSGGGGNLRGKGKVRPESVMEAAALAASGQPFEVVYYPRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIQLSPFSPPRKKFRLPQHPDFPLDGQFPLSSFSSNTLRPSSPMCCLSDNTSVGIQGARHTQFGISLSDFHLNNKLQLGLVPSSFQQLDFHSRISNRSVTDHRDSSSQNSSALLNGEKTGPKLERSDSVKKHQFLLFGQPILTEQQITCSSSGDIRSPRTEKSSLDMNLERVKFLSNNSGSTTKQQISPNKSSGVGFPWYQGYQATELGLDTGHCKVFMESEDVGRTLNLSVIGSYEELYRRLANMFGMEKPDILISHVLYQDATGAVKQAGDKPFSDFIKTARRLTILTDSGSDKLGRTLMDGMRSGENGLDASNRTGPLSIFA 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11941991 11945833 + XM_039046261.1 Bhi10g00538 46879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00538 787 ProSiteProfiles PB1 domain profile. 674 755 IPR000270 GO:0005515
Bhi10g00538 787 Gene3D - 673 760 - -
Bhi10g00538 787 MobiDBLite consensus disorder prediction 563 578 - -
Bhi10g00538 787 MobiDBLite consensus disorder prediction 558 587 - -
Bhi10g00538 787 Pfam B3 DNA binding domain 183 284 IPR003340 GO:0003677
Bhi10g00538 787 SUPERFAMILY DNA-binding pseudobarrel domain 178 287 IPR015300 -
Bhi10g00538 787 Gene3D - 181 285 IPR015300 -
Bhi10g00538 787 PANTHER AUXIN RESPONSE FACTOR 73 764 - -
Bhi10g00538 787 MobiDBLite consensus disorder prediction 323 343 - -
Bhi10g00538 787 ProSiteProfiles B3 DNA-binding domain profile. 183 285 IPR003340 GO:0003677
Bhi10g00538 787 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 73 764 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi10g00538 787 SMART B3_2 183 285 IPR003340 GO:0003677
Bhi10g00538 787 Pfam Auxin response factor 352 435 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi10g00538 787 Gene3D - 390 463 - -
Bhi10g00538 787 CDD B3_DNA 182 283 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01591 Bhi-Chr3:33612406 Bhi10g00538 Bhi-Chr10:11941991 0 dispersed
Bhi04g01378 Bhi-Chr4:34597771 Bhi10g00538 Bhi-Chr10:11941991 0 dispersed
Bhi04g01379 Bhi-Chr4:34597771 Bhi10g00538 Bhi-Chr10:11941991 0 dispersed
Bhi10g00538 Bhi-Chr10:11941991 Bhi10g00540 Bhi-Chr10:11941997 0 dispersed
Bhi10g00537 Bhi-Chr10:11941988 Bhi10g00538 Bhi-Chr10:11941991 0 tandem
Bhi10g00538 Bhi-Chr10:11941991 Bhi10g00539 Bhi-Chr10:11941992 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2109 PF02362 B3 1.60E-21 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00538 - - bhj:120088819 1570.83