Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00545 TCTCATTTCTCATACACATTCCTCTGCTCATCTTCTCCCCCCCTCTCCCGTTTCTTTTTCTTCTGATCATTAGGGCTCTTCCATTTTCAACTTCTTCACCACCCCTCTCATGTTTCTCACGCTCTCTCACTCTCCTCCCCCTTTTTTTCTTCTTTTCTTTCTTCCCTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCTACATGTTTCTCTGCTGCTTCGCCACCGCATTCATTCTCCCCTGATTCCTCCCTTTCTTTCTAATGCTCTTTCTCTGTCCCCCATACCCATTCCAGCCATCCCCATGTTTCTCTACTTCAACTTCCCTAACTGATTACCTTTCCTTTCTGGACCAGAGTAAAGGGGGGGGTACTGTTCTGAATTTTGAGCTGAGTCTCTGTTTTACAGGTCGTCATTTTGCAACCCCATTTGCCATTTTTCTTTCGTTTCACGAGTTCTAAGGTTTAGAAACTGAGTTTTTACTGTTACCCATTTTCTATTTGGGGTTTTTATGCTCTGAAATTGAATCCCCATCAACCTCTCTTTTGGTTTCTTTGTTGGGGTTTTCGTCTTTTTTAGCTTGGGGTACTGTGGGTTTTGGACGAAATGGCCATGGCTATAGCTCATCATAGAGAGAGTAGTAGTGGAAGTATAACCAGGCATCTTGATAGTTCTGGGAAGTACGTTCGTTACACAGCAGAACAGGTGGAGGCTCTTGAGCGAGTCTATGCTGAGTGCCCCAAGCCAAGTTCTCTTCGACGTCAGCAGCTTGTGCGGGATTGCCCAATTCTTTCCAACATAGAGCCCAAGCAGATCAAAGTTTGGTTTCAGAATCGCAGATGTAGGGAGAAGCAAAGGAAGGAGGCTTCTCGGCTGCAAACGGTGAACAGAAAATTGAATGCGATGAACAAGTTGTTGATGGAGGAGAATGATCGGCTGCAGAAGCAAGTGTCGCAATTGGTGTGTGAAAATGGGTTTATGAGGCAGCAATTGCAAACAGTGCCAGCAGCAGCAACTACTGATGCAAGCTGTGATTCTGTGGTCACCACTCCTCAACCTTCTCGACGAGATGCTAATAACCCAGCTGGACTCCTCTCCATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCACAAAGTTGTGGTGGAGTGGCAGCAAGAGCCTGTGGTCTTGTAAGTTTGGAGCCTTCGAAGATTGCAGAGATCCTTAAAGATCGTCCATCGTGGTTTCGTGATTGTCGAAGCCTTGAGGTTTTTACCATGTTTCCAGCTGGAAATGGTGGGACAATTGAACTTGTTTACACGCAGGTATATGCTCCAACTACGCTTGCTCCTGCACGTGATTTTTGGACTCTAAGATATACAATAACTTTAGAAAATGGCAGCCTTGTGGTTTGCGAGAGATCTCTCTCTGGTTCTGGTGCTGGTCCTAGTGAAGCTGCTGCTGCTCAGTTTGTGAGAGCTGAAATGCTCCCAAGTGGTTATCTGATTCGACCATGTGAGGGTGGTGGGTCTATCATACATATTGTTGATCACCTAAATCTTGAGGCATGGAATGTTCCCGAGGTGTTGCGACCACTTTATGAATCATCGAAAGTAGTGGCTCAGAAGATGACAATAGCAGCACTGCGGTATGTTAGGCAAATAGCCCAGGAGACAAGTGGTGAAGTGGTTTATGGTCTTGGCCGGCAACCTGCTGTTTTGCGAACCTTTAGCCAAAGATTGAGCAGGGGTTTCAATGATGCAGTGAATGGATTTAATGACAATGGATGGTCGTTGATCAATTGTGAAGGTGCTGAGGATGTGGTACTCACTGTGAATTCTACGAAAAATTTTGGCACAACATCAAACCCTGCTAACTCCTTGACATATCCTGGGGGAGTTCTTTGTGCAAAGGCATCCATGCTACTCCAAAATGTTCCTCCTGCTGTGTTAGTTCGTTTCTTGAGAGAACATCGCTCAGAGTGGGCTGATTTCAACATTGATGCATACTCTGCAGCAACCCTTAAAGCCAATTCATATGCATATCCAGGGATGAGACCCACAAGGTTTACCGGTAGCCAAATCATCATGCCACTCGGTCACACAATCGAGCACGAAGAGTTGCTTGAAGTGATTCGACTTGAAGGACATCCTATGGTACAAGAAGATGCCTTTGTTTCAAGGGACATTCATCTTCTTCAGATATGTAGTGGAATTGACGAGAATGCTGTAGGAGCGTGTTCAGAACTCGTTTTTGCTCCTATTGATGAAATGTTTCCGGACGATGCCCCTTTGCTGCCTTCTGGCTTTCGAATCATCCCATTGGATTCAAGAACAAGTGATGCTAAAGGTAGTCAACGGACTCTGGATCTAACATCGAGTCTTGAAGTGGGTTCTGGAACAAGCAATACTGCTGGAGGAGATGCATCATCAAGTCAGAGCGCTAGATCGGTGTTAACTATTGCATTCCAGTTTCCTTTTGAAAGCAGCATGCAGGATAATGTTGCAAACATGGCACACCAGTACGTACGTAGTGTCATTTCCTCGGTGCAGAGAGTTGCTATGGCCATATCCCCATCTGGGGGCGGTCCAGCACTAGGTCCAAAGCTGTCTCCTGGTTCTCCAGAAGCTCTTACTCTAGCACATTGGATATGCAAGAGCTATAGTTTCCAATTGGGAACGGAGTTGATCAAGTCAGATTCCTTGGAATGTGATTCGCTTTTGAAAAATCTCTGGAATCATCAGGATGCAATATTGTGCTGTTCGCTGAAGCAGTCACTGCCTGTTTTCCTGTTTGCAAACCAAGCTGGACTTGACATGTTGGAAACAACTCTAGTAGCTTTACAAGACATCACCTTGGATAAGATATTCGACGAGTCAGGTCGCAAAGCCTTGTGTGCTGATTTCCCAAAGTTGATGCAGCAGGGATTTGCATACTTGCCGGGAGGAATCTGTGCATCAACAATGGGGCGACATGTTTCATACGAACAAGCTGTTGCATGGAAAGTCCTCGAGGCAGATGAAACAACAGTCCATTGCCTTGCCTTCTCATTCATAAACTGGTCTTTTGTTTGATTGTGAAGCCTTCTTCAATGGCTCTCCTCGTCCTCATCCATTGGAACAGGATGAATGAAGATGAAGATGACTGTTTCAATGTCTAATGCAATGCCTCTGCTTCCAAAGTAATTTATTTTAAATTGTTAATTAATTGCTTTCCATCTTTTTCTCTTCCTTTCAATCCCCATTTTGATTCATGTAAATATTGGCGAGCCCATTAGATTACAAATACATGACCCATCAAGGAGGCAGTTTTGAAGCTTCAGTCTA 3406 45.07 MAMAIAHHRESSSGSITRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLVRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVCENGFMRQQLQTVPAAATTDASCDSVVTTPQPSRRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERSLSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDNGWSLINCEGAEDVVLTVNSTKNFGTTSNPANSLTYPGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNIDAYSAATLKANSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSRTSDAKGSQRTLDLTSSLEVGSGTSNTAGGDASSSQSARSVLTIAFQFPFESSMQDNVANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSYSFQLGTELIKSDSLECDSLLKNLWNHQDAILCCSLKQSLPVFLFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFPKLMQQGFAYLPGGICASTMGRHVSYEQAVAWKVLEADETTVHCLAFSFINWSFV 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11992890 11999359 - XM_039045611.1 Bhi10g00545 46886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00545 843 Gene3D - 201 379 IPR023393 -
Bhi10g00545 843 ProSiteProfiles START domain profile. 155 383 IPR002913 GO:0008289
Bhi10g00545 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 843 - -
Bhi10g00545 843 MobiDBLite consensus disorder prediction 599 630 - -
Bhi10g00545 843 Pfam START domain 165 373 IPR002913 GO:0008289
Bhi10g00545 843 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Bhi10g00545 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 843 IPR044830 GO:0003700
Bhi10g00545 843 Pfam MEKHLA domain 698 842 IPR013978 -
Bhi10g00545 843 SMART HOX_1 22 88 IPR001356 GO:0003677
Bhi10g00545 843 SUPERFAMILY Bet v1-like 164 376 - -
Bhi10g00545 843 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Bhi10g00545 843 Gene3D - 19 91 - -
Bhi10g00545 843 CDD START_ArGLABRA2_like 159 375 - -
Bhi10g00545 843 CDD bZIP 77 116 - -
Bhi10g00545 843 CDD homeodomain 25 85 IPR001356 GO:0003677
Bhi10g00545 843 Coils Coil 80 121 - -
Bhi10g00545 843 SMART START_1 164 374 IPR002913 GO:0008289
Bhi10g00545 843 SUPERFAMILY Homeodomain-like 22 87 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01032 Bhi-Chr8:33672938 Bhi10g00545 Bhi-Chr10:11992890 0 dispersed
Bhi10g00545 Bhi-Chr10:11992890 Bhi05g01315 Bhi-Chr5:46309184 2.28E-27 dispersed
Bhi10g00545 Bhi-Chr10:11992890 Bhi10g00546 Bhi-Chr10:11992890 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2113 PF01852 START 3.30E-46 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00545 K09338 - csv:101215773 1644.4