Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00549 TTCTTCCTCATCACTACCACTTTCCCACTTCCATTTCTCTTCCCAAAAGCTCCAAATCAATCAAAAATGGGGAAAGACGTTGAAGTTGCAGAGCAAGGCGAATTCCAAAGCAAAGACTACCAAGACCCACCCCCCGCCCCTCTAATCGACCCTGAAGAACTCACCAAATGGTCCCTTTACAGAGCCGCCATCGCTGAGTTCATCGCCACTCTTCTCTTTCTCTACGTCACCGTTCTGACCGTCATCGGTTACTCCCACCAGAGCGACCCTTCCGTTTCTTCCGACCCCTGTAACGGTGTCGGCATCCTCGGCATCGCCTGGGCTTTCGGTGGTATGATCTTCATCCTCGTTTACTGCACTGCCGGTATCTCCGGTGGCCACATTAACCCCGCTGTCACTTTCGGTCTCTTCTTGGCTCGTAAGGTTTCTTTGGTTCGGGCTCTGTTATACATAATTGCTCAGTGCGCCGGCGCTATTTGCGGCTGTGGCTTGGTTAAAGCCTTCCAATCTGCTTATTATGTTAGATATAACGGCGGTGCTAATATGCTTAATGTTGGGTACAACAAAGGCACTGGATTAGGCGCTGAAATTATTGGAACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACTGATCCCAAGAGAAACGCCAGAGATTCCCATGTTCCCGTTTTGGCTCCACTCCCAATTGGGTTTGCTGTGTTCATGGTTCATTTGGCTACAATCCCCATCACTGGAACTGGAATTAACCCTGCAAGAAGCTTTGGAGCTGCTGTAATATTCAACAAAGAGAAAGCCTGGGATGACCAATGGATTTTCTGGGTTGGGCCATTTATTGGAGCTGCAATTGCTGCAATTTACCATCAGTATGTGCTCAGAGCTGGAGCTATTAAAGCTCTTGGATCTTTCAGGAGCAACGCTTGAAAAATCCTTATGGAAATATAATTTAATTGGTTTCTCTCAGAAGACAAGATTGTGTTTTGTTTTTTTTGTTTTGGGTTTTGTTCTTTTTCCTTCTCAATAGACTTTTGATGGTGGAATTTGGAACTCAATTGTTGCTGCTCTGTTCTCGTCCGCTTTCGTCCGTCATCAAAATTGAGTTCTACAAGAAGTTTAATTATTGGCCCTGGAAATTGTACATATTTCCATCTCTCCCCCCCTATAAAAACGAAAAAAAAAAAAAAAAATGGGGCGCATTCTCATCTTATGTCTGTTGTTGATGTATTTTCTTTTGTGTTTCATCCTTATCCTTTGTTTTTCTTAATAAAAGAATCTCCTTTATTATGTTCA 1290 43.64 MGKDVEVAEQGEFQSKDYQDPPPAPLIDPEELTKWSLYRAAIAEFIATLLFLYVTVLTVIGYSHQSDPSVSSDPCNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCAGAICGCGLVKAFQSAYYVRYNGGANMLNVGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12145531 12146987 + XM_039045974.1 Bhi10g00549 46890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00549 285 MobiDBLite consensus disorder prediction 1 24 - -
Bhi10g00549 285 TIGRFAM MIP: MIP family channel proteins 43 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Bhi10g00549 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 285 IPR034294 -
Bhi10g00549 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Bhi10g00549 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 SUPERFAMILY Aquaporin-like 30 271 IPR023271 -
Bhi10g00549 285 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi10g00549 285 PANTHER AQUAPORIN PIP2-4-RELATED 1 285 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01699 Bhi-Chr3:35743658 Bhi10g00549 Bhi-Chr10:12145531 1.62E-153 dispersed
Bhi03g01700 Bhi-Chr3:35760003 Bhi10g00549 Bhi-Chr10:12145531 1.90E-173 dispersed
Bhi04g01369 Bhi-Chr4:34531209 Bhi10g00549 Bhi-Chr10:12145531 1.47E-156 dispersed
Bhi10g00549 Bhi-Chr10:12145531 Bhi11g02101 Bhi-Chr11:59467769 6.67E-154 dispersed
Bhi10g01899 Bhi-Chr10:47672811 Bhi10g00549 Bhi-Chr10:12145531 3.31E-22 dispersed
Bhi12g00276 Bhi-Chr12:8092411 Bhi10g00549 Bhi-Chr10:12145531 9.24E-141 dispersed
Bhi10g00549 Bhi-Chr10:12145531 Bhi05g01707 Bhi-Chr5:55341197 3.15E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00549 K09872 - csv:101215300 546.584