Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00561 TTGCCTATCGAACAGCTCGTAGAAACCATAAATTTTCTAAATACGGTTAGTGGCGAACGGCGATGGTGGTCGTTGGGGGTGTTTGGTCCTGCATCTTCGTAAGCGGGTTGTACGGTGAACATCTCAGGCTGTGAGAGAGAAAGAAAGAAGGAGAAATGAAGAAGAAACAATGTTCGACCCATTTTTGTATCTCCACAAAATTTCTGCTTCAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCCCAAAATGACGGTAATCGACATCATCTTCCGAGTTGATTCCATTTGCAAGAAATATGAAAAGTATGATGTCGAGAAACAGCGTGAGCTCAATGCTTATGGTGACGATGCCTTCGCTCGCCTCTTCGCAGCCGTCGAACTCGAAATCCAAGCCGCTCTCCAGAAATCTGAGGTTGCCTTATCTGAGAAGAATAGGGCTGCTGCAGTTGCGATGAACGCTGAGGTTCGACGGAAGAAGGCTCGATTGATGGATGAAGTCCCTAAGCTTCGTAAATTGGCTCACAAGAAGGTTAAAGGGGTTCCAAAAGAAGAGCTCGAGGTCAGAGATGATCTTGTTCTTGCGCTTGAAGAGAAGATTAAAGCCATACCAGATGGGAGTACCACAGGAGCCAAACAATCTGGAGGATGGGGGCCCTCCTCCTCATCTAACAATATCAAGTTTGATTCATCAGATGGAAACTTTGAGAGCGAGTATTTCCAGCAAAATGAAGAATCAAGCCAATTTCGAAATGAGTATGAAATGCGGAAGATGAAACAGGACCAAGGTCTCGATGTCATATCTGAAGGTTTGGATATGCTGAAAAATCTTGCCCATGATATGAACGAGGAATTGGACAGGCAAGTTCCATTAATTGACGAGATCGACGCAAAGGTAGACAAGGTGACTAATGAGATGAAAAATACCAATGTTAGGCTGAAGGAAACGCTCTATGAGGTGAGAACCAGCCAAAACTTCTGCATTGATATTATTCTTCTCTGTATAATTCTTGGCATTGCTTCTTACTTGTACAATATATTGAGCTGAATTGGTTTAAGAGCTATTGTTTCATTGGTTGAATTATGGGATGATCCTGAGCTACGAGGTAAATGTGGAGGATCATTAATCAATACTCTGCACTTCGATGATCTTTTCAGCTTTGTGAAGAATTTATTCATTTCATTTCTGGGTTTACTGTAAAATATATCCAACTTTTCATTAAGCTTATTAACTTGTGTAATTGGTGGAGTTAAATATAAAGATAATGGTTTTTTGTTCTTATTTTCTGCTTTTGAGCAAATAGATTTGGAACAATATTAGTTCCCTGAAATACTTGGATCAAAGTCCGTGTAACGCTTGAT 1373 40.57 MTVIDIIFRVDSICKKYEKYDVEKQRELNAYGDDAFARLFAAVELEIQAALQKSEVALSEKNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVLALEEKIKAIPDGSTTGAKQSGGWGPSSSSNNIKFDSSDGNFESEYFQQNEESSQFRNEYEMRKMKQDQGLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDAKVDKVTNEMKNTNVRLKETLYEVRTSQNFCIDIILLCIILGIASYLYNILS 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12273471 12276617 - XM_039046240.1 Bhi10g00561 46902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00561 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Bhi10g00561 265 SMART tSNARE_6 166 233 IPR000727 -
Bhi10g00561 265 Gene3D - 171 232 - -
Bhi10g00561 265 PANTHER SYNTAXIN 1 262 IPR045242 -
Bhi10g00561 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi10g00561 265 PANTHER SYNTAXIN-72 1 262 - -
Bhi10g00561 265 MobiDBLite consensus disorder prediction 124 145 - -
Bhi10g00561 265 Coils Coil 209 229 - -
Bhi10g00561 265 CDD SNARE_Qc 176 232 - -
Bhi10g00561 265 MobiDBLite consensus disorder prediction 122 145 - -
Bhi10g00561 265 Pfam SNARE domain 208 257 IPR000727 -
Bhi10g00561 265 SUPERFAMILY SNARE fusion complex 167 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00561 Bhi-Chr10:12273471 Bhi11g02112 Bhi-Chr11:59753419 9.06E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00561 K08506 - csv:101211289 470.314