Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00565 CTGTGTTTCCTATGCAATTGTCTATGTCTGTTGCTTCTGCTCCCTCTTCTCAGTACCTGCAAATGGGAGAGGAATCATACTTTGAATTTCTTGTTATTATTTGATACCCCCCTTTTCTTTTCTTTTTTTTCTTCACTATCTTTTTAGCCTACTGGCTTAGCATCCATCCAAACACTACTTTCTTGTTGTTTTCTGTTCATCTCCTTTCACTTCTCTCCTGTTTTTAGCTTTATCGGTATCCCTTCAGGATATATTTTCAGCATTCTTTACCATGATTTGACCTCATTTCCAGTTTTCTACAGCTTTGGTCTTCTTGTCACCTTATTGCCAATTGATCACTCCACGCCATTCCCCTTTCTTGTTTTAGTTCTGTTGGGAAGCTTAGCAATAGGACACTTGAAGTAACCCCCTGGGTTGTTCATGGAAATTGATCTGAACCAAACAGCCAGTGAGGTGGGGAAGAATGCATATTGCTATGGAAATTGTGAAGAGGGTCTTTGCAATTGTTGTTTATCCTCTTCAACTTCTTCTTGTTCCTCAAATTCATCGCCAACTCCCGTCTCTTCTTCAACCTATTTGGAGCTTTGGCATGCTTGTGCTGGTCCTCTCACCTCATTGCCCAAGAAAGGAAATGTAGTTGTCTATTTCCCACAAGGTCACTTGGAGCAAATTGCCTCAGCCTCTCCCTTTTCCCCCATGGAGATGCGCACTTTTGACCTTCAGCCACAGATCCTCTGCAGGGTCATCAATGTCCACCTACTTGCCAATAAGGAGAATGATGAGGTCTATACACAACTTACTCTCCGCCCCTTGCCAGAGTTATTAGGCAGTGGTCTAGAAGCCAAAGAGCTGGAGGAATTGGCGTTGAATGGGGCTGATGGAGACGGGAGTGGAGGGTCGCCTACTAGATCTACACCTCACATGTTCTGCAAAACACTTACAGCATCTGACACGAGCACCCATGGAGGATTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTCCCTCCTCTGGATTACACTCAGCTTAGGCCATCTCAAGAGCTAATAGCCAAGGACCTGCATGGCGTGGAGTGGAGATTTAAACATATCTACAGAGGTCAACCTAGGAGGCATCTGCTCACTACTGGATGGAGTATTTTTGTAAGCCAAAAGAATCTTATTTCTGGCGATGCAGTGCTCTTTTTAAGGGGTGAAAATGGAGAGTTAAGGTTGGGAATAAGGCGAGCCGTTCGGCCTAGAAATGGTCTTCCTGATTCAATTGTTGGCAACCAAAATTCTTGTGCAAACGATCTTGCTCGTGTGGTGAAAGCAATATCCACCAAGAGCACATTTGATGTGTTTTATAATCCAAGGGCATATCATGCACAATTTGTTATATCTTGTCAGAAGTATGTGAAGAGCATCAATAGTCCAGTGACTGTAGGCACGAGATTCAAAATGAGATTTGAGATGGATGATTCACCAGAAAGAAGATTTAATGGTGTAGTTGTCGGAATTTGTGACATGGATCCCTTTAGATGGCCGAACTCAAAGTGGAGATGCTTAACGGTCCGATGGGATAAAGACAGTGATCATCAAGAACGTGTTTCCCCCTGGGAGATCGATCCTTCTGTTTCTCTCCCACCCTTGAGTGTTCAGTCTTCTCCAAGGTTGAAGAAACTGAGGACTAGTCTACAGGCAGCCCCACCTAATAACGCCTTTACTGGGAGGGGCGGTTTTATGGACTTTGAGGATTCAATTAGATCCTCTAAGGTCTTGCAAGGTCAAGAAAATGTAGGTATTGTATCACCCTTTTATGGATGTGATACTGCAGAACGTTCACTGGAGTTTGATGTGCGATCTTCTGCACAACAAAACCAAGTGTCAGGTGGAGTTGAAAAACTCAATATAGGTGATTATGTAAAGGTTCATGCGAACTCTTCTTTCACAGGCTTTATGGAATCTGATAGATTTCTGAAGGTCTTGCAAGGTCAAGAAATATGCTCATTGAGGCCACCAACTAGAAAACCAGAATATAGTTTAGGTGTTTGGGGAAAGTTCAATCTTAGTGACAACTCTTTTAACACATTTCAATCACCAAACTCCAATTTTTATCACATGGCATCTAATGGCGCCCAAAACATGTATTTTCCTCGTAGTGAAATGTGCAGTACTGGCCAAGCTGCCATGATGCGCTCAAATGATAGCAACTTTCCAAGAGAGAATGCCTTGTTCAACGCATCTGCTGTTGGTGCTAATGTTATCAGGACTAAAATGGAAAGGACTAATTGTTCACTCGATCGGGAGTCTCTACATCTAGTGTCTGCTCCTCCAACTTTAGGGTCGAATATGAGGAATTCAAAGGATGAAAACGTGAAGGAGAACCCAACTGGCTGTAAACTTTTTGGCTTTTCCTTAACTACGGAAACTGCTACAAACATGCAAAGTTCAGGAAAGAGAAGTTGTACCAAGGTTCACAAACAAGGCAGCCTGGTGGGAAGAGCTATTGATCTCTCTAGGTTGAATGGCTATACAGATCTGCTTTCTGAACTGGAGCGACTGTTTAGTATGGAAGGTCTATTAAAAGATCCTGATAAAGGATGGCGGGTGTTGTACACCGACAATGAGAACGACGTAATGGTTGTTGGGGACTATCCATGGCATGACTTCTGTGATGCGGTTTCGAAAATCCATATATACACGCAAGAAGAAGTGGAGAAGATGACAAATGGAGTGATCAGTGATGATACACAAAGCTGCTTAGACCAGGCTCCTTTATGTATGGAAGCATCAAAATCCTCTTCAGTGGGTCAACCTGATTCCCCTCCCACAGTAGTAAGAGTTAATTAATAATGAAGATGTGTGTTTTCCCACATTTCCTTAGAAGCATGTGTTTTCCATATCTATTGCTCCGTCTGTCAAGCTCGAAGTCGGTAGCTTTGCTGCCATAAACGGCATTATGTAGCTTCGTGTCTCTCTGCCCTATAGGTTGGAATCTGTTTCAAACCTCTGGCTTTCGAATGGACTGTGTGTAATTCTACTCATCTTTTAAGCTGTGTGGAATGTTATGATATTGAAGATTTTGGACTTTGTAGAAGAGAATAAATTTGTTTAGCAGTTGCTTGTAATTAGACTCAGAGATCGTGGGAATTTGAATAAGTGTAGATTAGTTTTTTGTGGGATGATTTGAGGGCAGACAGACATTTTCAACAAGAAAACTTGAAATGTGGATTTTCAGGTTTTCACAACACA 3234 42.52 MEIDLNQTASEVGKNAYCYGNCEEGLCNCCLSSSTSSCSSNSSPTPVSSSTYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPQILCRVINVHLLANKENDEVYTQLTLRPLPELLGSGLEAKELEELALNGADGDGSGGSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFVISCQKYVKSINSPVTVGTRFKMRFEMDDSPERRFNGVVVGICDMDPFRWPNSKWRCLTVRWDKDSDHQERVSPWEIDPSVSLPPLSVQSSPRLKKLRTSLQAAPPNNAFTGRGGFMDFEDSIRSSKVLQGQENVGIVSPFYGCDTAERSLEFDVRSSAQQNQVSGGVEKLNIGDYVKVHANSSFTGFMESDRFLKVLQGQEICSLRPPTRKPEYSLGVWGKFNLSDNSFNTFQSPNSNFYHMASNGAQNMYFPRSEMCSTGQAAMMRSNDSNFPRENALFNASAVGANVIRTKMERTNCSLDRESLHLVSAPPTLGSNMRNSKDENVKENPTGCKLFGFSLTTETATNMQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLLSELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNGVISDDTQSCLDQAPLCMEASKSSSVGQPDSPPTVVRVN 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12531418 12538151 + XM_039045266.1 Bhi10g00565 46906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00565 803 Pfam Auxin response factor 296 376 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi10g00565 803 CDD B3_DNA 167 269 IPR003340 GO:0003677
Bhi10g00565 803 ProSiteProfiles PB1 domain profile. 674 758 IPR000270 GO:0005515
Bhi10g00565 803 Gene3D - 670 763 - -
Bhi10g00565 803 ProSiteProfiles B3 DNA-binding domain profile. 169 271 IPR003340 GO:0003677
Bhi10g00565 803 Pfam B3 DNA binding domain 169 270 IPR003340 GO:0003677
Bhi10g00565 803 Gene3D - 167 271 IPR015300 -
Bhi10g00565 803 Gene3D - 333 402 - -
Bhi10g00565 803 SUPERFAMILY DNA-binding pseudobarrel domain 163 280 IPR015300 -
Bhi10g00565 803 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 790 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi10g00565 803 SMART B3_2 169 271 IPR003340 GO:0003677
Bhi10g00565 803 PANTHER AUXIN RESPONSE FACTOR 18 790 - -
Bhi10g00565 803 SUPERFAMILY CAD & PB1 domains 676 753 - -
Bhi10g00565 803 Pfam AUX/IAA family 722 759 IPR033389 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00353 Bhi-Chr3:7346221 Bhi10g00565 Bhi-Chr10:12531418 1.37E-145 dispersed
Bhi03g00354 Bhi-Chr3:7346226 Bhi10g00565 Bhi-Chr10:12531418 2.44E-147 dispersed
Bhi05g02090 Bhi-Chr5:63770368 Bhi10g00565 Bhi-Chr10:12531418 1.68E-35 dispersed
Bhi10g00565 Bhi-Chr10:12531418 Bhi12g00123 Bhi-Chr12:3921637 3.38E-21 dispersed
Bhi10g00565 Bhi-Chr10:12531418 Bhi08g02023 Bhi-Chr8:58272146 1.86E-17 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2117 PF02362 B3 1.10E-20 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00565 - - csv:101212503 1514.98