Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00612 TCGTAGAATGGGTCTGAAATGTTCCTTCACACGTCCCATCCTCTTCTTTCATCTTTCTCCGCCGTGGAATCACATAGTTGCCAATAATTTCACACTTCTCCGGTGCCAATTAGCATCGCCGGCGGAATGCGAAATGCTAACATCTCTCGAGCTTTTGCCGCTCGATTCTCACTTTGAGTGAGCTTCTTTGTGTTTTACTATTCTGTTGCTCCGGCGAACGGCGGACGGCGTCGTTTCCGACGGAAATCCGGATAGAAGAAGCTGGAAGTTCACTTTCTACTTTTACTTTTTCTACGGATTAATCTTCATTCCTCAAGTTTCCTCATATGAAGATCTTTTAGTAGTTTTCTTCGCTTGATTGTGTTTCTGGATTTTATTTTTTACTTTATCCATTCAAATTGATAGTGCGATTGGTTGTTTTAGTCTTTTGGTGGTTTCTGATAACGATTGATTTGTACTGTTCGATCAAACATGGTGATCGATGCTTAAATGTTGAATTGGATCGACTGCGAAGGTGTGTGGTAGGAAAATCTGAATAGAATTCAGGATTGGAAGCTTTGGGAAGAGATTAAGAGAAGATGTTTGATCTTAATCTCAATGTCGACTCGCCTGATGCGACTCAGAATGAGGGCTCCGTTGTGTTCTTTGAGAAGCTTCCTCAAGGCTCGGGGAACCAAATGGATGAATCAGGAACTTCCAATTCTTCGATTGTCAATGCGGATACCTCCAGCAATGGCGGCGATGACGACTCGTGCTCCACACGCGCCGGTGGTGAGCTCTTCACGTTCAGCTTCGAGATATTGAAGGCAGGAAGCGCGAACGACGTTGTTACGAAGGAGCTTTTTCCAATAGGTGGAACGGTGAATGCTGACTTCGGGATTCTTCAGGGGCATAACTCCGCCTCTTCTTCGTCAACCTCATCGAGGAAGAACTGGATCAACCTTGCGTTTGATCGAAGCGGATCGGCAGGGGAGGGGAGAGTGGTTCAGCCGGTTCAGCCTCAGCCGGTGAAGAAGAGCAGGAGGGGACCGAGGTCTCGGAGCTCGCAGTACAGAGGCGTCACATTCTACCGGAGGACTGGGCGGTGGGAATCTCATATCTGGGACTGTGGAAAGCAGGTCTATCTCGGTGGATTCGACACTGCACATTCTGCAGCAAGAGCATATGATCGAGCTGCTATCAAGTTCAGAGGGGTCGATGCTGATATTAATTTCAATCTTAGTGATTATGAGGATGATCTGAAACAGATGAAGAATTTAAGCAAGGAAGAGTTTGTTCACATACTTCGTCGCCAGAGCACTGGTTTCTCAAGAGGGAGCTCCAAATATAGAGGGGTGACACTGCACAAATGTGGCCGATGGGAAGCTAGAATGGGGCAGCTCCTCGGTAAAAAGTATATATATCTTGGGCTATTCGACAGCGAGGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCAATCAAATGTAATGGGCGGGAGGCAGTGACCAACTTTGAGCCTAGCACATACGGAGAGAGAATTTCTGAGGGCAGCAGTGAAGGTGGGCGGAACATGCTCGATTTGAATTTAGGGATTTCGCCTCCCTCACTTAACAACTGCCCAAAGGATACTGAGGGGCATCTGCGGTTTCAATCGGGTCCTTGTTATGCTAATGACAGGAGCACAATGATGGAGAGCAATGCTGATGCAGCAGTTGGCGATCCACCTTTGAAAGGACCAGCAATGACATCGGAGCGTGTTCCCTTATGGAACAGTTTACAATCTAGCTTCTTTCCCAGTGAGGAAATCGTGACAGAGAAGAGACTTGCATTAGGTTCATCCCAAGGAGTCCCCCCCAACTGGGGATGGCAAATTCATAGCCAGGTTAATGCCACCCAAGTGCCACTGTTCTCTGCTGCAGCATCATCAGGATTCTCATTTTCAGCTACCCATTTCCCGGCTGCCATCCATCCGCTGTGCCGTCCGGGCTCGACCGCCCATAATCTCCATTTCTCTTCTGCCAAAGCTTCCCTCAACTCGCCTCAGTATCACCACCAGTTGAACCAACAACAGGCACCACCATAATCCTTATTCTTCTACATTAGAGGGTAACCAATAGTAAAATATGCTTCAATTGGTTATCTTCTTTTCATTTGTATGCTTTTATAAGTAATGATAGTTGATTTGCACTCTTGCTTGATTCCTGACTAAATAGCTCATTACAAAAATACTATGTTTGTTTCATATTCCTGTACCTGAAAAATATATATAATATGCTAATATAATACCTACTCTTGCATTCATTA 2284 46.02 MFDLNLNVDSPDATQNEGSVVFFEKLPQGSGNQMDESGTSNSSIVNADTSSNGGDDDSCSTRAGGELFTFSFEILKAGSANDVVTKELFPIGGTVNADFGILQGHNSASSSSTSSRKNWINLAFDRSGSAGEGRVVQPVQPQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYGERISEGSSEGGRNMLDLNLGISPPSLNNCPKDTEGHLRFQSGPCYANDRSTMMESNADAAVGDPPLKGPAMTSERVPLWNSLQSSFFPSEEIVTEKRLALGSSQGVPPNWGWQIHSQVNATQVPLFSAAASSGFSFSATHFPAAIHPLCRPGSTAHNLHFSSAKASLNSPQYHHQLNQQQAPP 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13385403 13389443 + XM_039046922.1 Bhi10g00612 46953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00612 494 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 Pfam AP2 domain 248 298 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 PRINTS Ethylene responsive element binding protein signature 288 308 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 MobiDBLite consensus disorder prediction 27 58 - -
Bhi10g00612 494 CDD AP2 157 215 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 Gene3D AP2/ERF domain 156 214 IPR036955 GO:0003700|GO:0006355
Bhi10g00612 494 Gene3D AP2/ERF domain 248 307 IPR036955 GO:0003700|GO:0006355
Bhi10g00612 494 CDD AP2 248 308 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 ProSiteProfiles AP2/ERF domain profile. 249 306 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 MobiDBLite consensus disorder prediction 30 58 - -
Bhi10g00612 494 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 457 - -
Bhi10g00612 494 MobiDBLite consensus disorder prediction 131 158 - -
Bhi10g00612 494 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Bhi10g00612 494 SUPERFAMILY DNA-binding domain 248 307 IPR016177 GO:0003677
Bhi10g00612 494 SMART rav1_2 249 312 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Bhi10g00612 494 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01666 Bhi-Chr3:34960258 Bhi10g00612 Bhi-Chr10:13385403 3.15E-119 dispersed
Bhi07g01016 Bhi-Chr7:33466833 Bhi10g00612 Bhi-Chr10:13385403 1.93E-10 dispersed
Bhi10g00612 Bhi-Chr10:13385403 Bhi10g01798 Bhi-Chr10:44978620 1.40E-93 dispersed
Bhi10g00612 Bhi-Chr10:13385403 Bhi10g00613 Bhi-Chr10:13385404 0 tandem
Bhi10g00612 Bhi-Chr10:13385403 Bhi11g02150 Bhi-Chr11:60340119 2.00E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2120 PF00847 AP2 3.10E-09 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00612 K09284 - csv:101222024 914.835