Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00613 CGTAGAATGGGTCTGAAATGTTCCTTCACACGTCCCATCCTCTTCTTTCATCTTTCTCCGCCGTGGAATCACATAGTTGCCAATAATTTCACACTTCTCCGGTGCCAATTAGCATCGCCGGCGGAATGCGAAATGCTAACATCTCTCGAGCTTTTGCCGCTCGATTCTCACTTTGAGTGAGCTTCTTTGTGTTTTACTATTCTGTTGCTCCGGCGAACGGCGGACGGCGTCGTTTCCGACGGAAATCCGGATAGAAGAAGCTGGAAGTTCACTTTCTACTTTTACTTTTTCTACGGATTAATCTTCATTCCTCAAGTTTCCTCATATGAAGATCTTTTAGTAGTTTTCTTCGCTTGATTGTGTTTCTGGATTTTATTTTTTACTTTATCCATTCAAATTGATAGTGCGATTGGTTGTTTTAGTCTTTTGGTGGTTTCTGATAACGATTGATTTGTACTGTTCGATCAAACATGGTGATCGATGCTTAAATGTTGAATTGGATCGACTGCGAAGGTGTGTGGTAGGAAAATCTGAATAGAATTCAGGATTGGAAGCTTTGGGAAGAGATTAAGAGAAGATGTTTGATCTTAATCTCAATGTCGACTCGCCTGATGCGACTCAGAATGAGGGCTCCGTTGTGTTCTTTGAGAAGCTTCCTCAAGGCTCGGGGAACCAAATGGATGAATCAGGAACTTCCAATTCTTCGATTGTCAATGCGGATACCTCCAGCAATGGCGGCGATGACGACTCGTGCTCCACACGCGCCGGTGGTGAGCTCTTCACGTTCAGCTTCGAGATATTGAAGGCAGGAAGCGCGAACGACGTTGTTACGAAGGAGCTTTTTCCAATAGGTGGAACGGTGAATGCTGACTTCGGGATTCTTCAGGGGCATAACTCCGCCTCTTCTTCGTCAACCTCATCGAGGAAGAACTGGATCAACCTTGCGTTTGATCGAAGCGGATCGGCAGGGGAGGGGAGAGTGGTTCAGCCGGTTCAGCCTCAGCCGGTGAAGAAGAGCAGGAGGGGACCGAGGTCTCGGAGCTCGCAGTACAGAGGCGTCACATTCTACCGGAGGACTGGGCGGTGGGAATCTCATATCTGGGACTGTGGAAAGCAGGTCTATCTCGGTGGATTCGACACTGCACATTCTGCAGCAAGAGCATATGATCGAGCTGCTATCAAGTTCAGAGGGGTCGATGCTGATATTAATTTCAATCTTAGTGATTATGAGGATGATCTGAAACAGATGAAGAATTTAAGCAAGGAAGAGTTTGTTCACATACTTCGTCGCCAGAGCACTGGTTTCTCAAGAGGGAGCTCCAAATATAGAGGGGTGACACTGCACAAATGTGGCCGATGGGAAGCTAGAATGGGGCAGCTCCTCGGTAAAAAGGCTTATGACAAGGCAGCAATCAAATGTAATGGGCGGGAGGCAGTGACCAACTTTGAGCCTAGCACATACGGAGAGAGAATTTCTGAGGGCAGCAGTGAAGGTGGGCGGAACATGCTCGATTTGAATTTAGGGATTTCGCCTCCCTCACTTAACAACTGCCCAAAGGATACTGAGGGGCATCTGCGGTTTCAATCGGGTCCTTGTTATGCTAATGACAGGAGCACAATGATGGAGAGCAATGCTGATGCAGCAGTTGGCGATCCACCTTTGAAAGGACCAGCAATGACATCGGAGCGTGTTCCCTTATGGAACAGTTTACAATCTAGCTTCTTTCCCAGTGAGGAAATCGTGACAGAGAAGAGACTTGCATTAGGTTCATCCCAAGGAGTCCCCCCCAACTGGGGATGGCAAATTCATAGCCAGGTTAATGCCACCCAAGTGCCACTGTTCTCTGCTGCAGCATCATCAGGATTCTCATTTTCAGCTACCCATTTCCCGGCTGCCATCCATCCGCTGTGCCGTCCGGGCTCGACCGCCCATAATCTCCATTTCTCTTCTGCCAAAGCTTCCCTCAACTCGCCTCAGTATCACCACCAGTTGAACCAACAACAGGCACCACCATAATCCTTATTCTTCTACATTAGAGGGTAACCAATAGTAAAATATGCTTCAATTGGTTATCTTCTTTTCATTTGTATGCTTTTATAAGTAATGATAGTTGATTTGCACTCTTGCTTGATTCCTGACTAAATAGCTCATTACAAAAATACTATGTTTGTTTCATATTCCTGTACCTGAAAAATATATATAATATGCTAATATAATACCTACTCTTGCATTCATTA 2238 46.07 MFDLNLNVDSPDATQNEGSVVFFEKLPQGSGNQMDESGTSNSSIVNADTSSNGGDDDSCSTRAGGELFTFSFEILKAGSANDVVTKELFPIGGTVNADFGILQGHNSASSSSTSSRKNWINLAFDRSGSAGEGRVVQPVQPQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKAYDKAAIKCNGREAVTNFEPSTYGERISEGSSEGGRNMLDLNLGISPPSLNNCPKDTEGHLRFQSGPCYANDRSTMMESNADAAVGDPPLKGPAMTSERVPLWNSLQSSFFPSEEIVTEKRLALGSSQGVPPNWGWQIHSQVNATQVPLFSAAASSGFSFSATHFPAAIHPLCRPGSTAHNLHFSSAKASLNSPQYHHQLNQQQAPP 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13385404 13389443 + XM_039046923.1 Bhi10g00613 46954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00613 479 Gene3D AP2/ERF domain 248 292 IPR036955 GO:0003700|GO:0006355
Bhi10g00613 479 Gene3D AP2/ERF domain 156 214 IPR036955 GO:0003700|GO:0006355
Bhi10g00613 479 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 442 - -
Bhi10g00613 479 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Bhi10g00613 479 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 442 - -
Bhi10g00613 479 MobiDBLite consensus disorder prediction 27 58 - -
Bhi10g00613 479 CDD AP2 157 215 IPR001471 GO:0003700|GO:0006355
Bhi10g00613 479 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Bhi10g00613 479 SUPERFAMILY DNA-binding domain 248 292 IPR016177 GO:0003677
Bhi10g00613 479 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Bhi10g00613 479 SMART rav1_2 249 297 IPR001471 GO:0003700|GO:0006355
Bhi10g00613 479 MobiDBLite consensus disorder prediction 30 58 - -
Bhi10g00613 479 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Bhi10g00613 479 CDD AP2 248 293 IPR001471 GO:0003700|GO:0006355
Bhi10g00613 479 MobiDBLite consensus disorder prediction 131 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01017 Bhi-Chr7:33466834 Bhi10g00613 Bhi-Chr10:13385404 1.29E-80 dispersed
Bhi10g00613 Bhi-Chr10:13385404 Bhi11g02150 Bhi-Chr11:60340119 6.18E-120 dispersed
Bhi10g00612 Bhi-Chr10:13385403 Bhi10g00613 Bhi-Chr10:13385404 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2121 PF00847 AP2 4.20E-10 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00613 K09284 - csv:101222024 875.93