Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00628 AGTCCCAATGGAACCGTTGGATAAACCAGCGCCGAAGGCCTCGCCACTCGCGCCATTTCCTCGGGACTCTCGAGGATCCTTAGAGGTTTTCAATCCCTCGTCCACTTACTCGTCCCGATCGATCAATTCCATTTCTCGGCCGAACCCAACGTGGCCCAATTGGGTCGAGCCACGTAGCAGTGCAGAATCGGACTCAACCAAACTCGCCGCTAAACCGGCGAGTAAAACCGGCGAGGAAATTACGTCATGGATGGCTTTCAAAGACTCAAACCCTTCACCACAACCCTCATCCCCACTCGCTCAGAAAACCATCTCGTCGATTTTCAGCGACAAATCGCCGTCGGGGAAGGCGAAATCGGCGGACGAAGTGGGTTCCGCCGCCCTACGCGCTGCCGAGTGGGGATTGGTACTGAAAACCGATACGGAAACTGGGAAGCCACAAGGCGTTGGAGTACGAACTTCCGGCGGCGATGAACCGAATACGAAACAGGAAACCTCGAGGAGGACTTCGAATAACACGGTGCGGAGTTCGGGCGACATGTCGGAAGAAGGGGGAAGAGAAAGGGGGATTCCGAGAGTGTCTGAAGATTTGAAAGACGCTCTGTCGACATTTCAACAAACATTTGTGGTTTCTGATGCTACGAAACCTGATTATCCGATTATGTATGCTAGTGCTGGATTTTTCAAGATGACTGGCTATACTTCCAAGGAAGTTATTGGAAGAAATTGTCGATTTTTACAGGGTGCAGATACAGACCCTGAAGATGTGGCTAAGATACGAGAAGCTTTACAAGCTGGGACAAGTTACTGTGGGAGGTTGTTGAATTACAAGAAAGACGGGACCCCTTTTTGGAACCTTCTTACTATTTCACCAATCAAAGATGATGATGGCAAAGTTCTTAAATTTATTGGAATGCAAGTGGAGGTGAGCAAACACACAGAGGGATTCAAAGATAAGATGGTCCGTCCCAATGGGTTGCCAGAATCCTTGATTCGTTATGATGCCCGTCAAAAGGAGATGGCTACCAGTTCGGTAACGGAGCTTGTGCAAGCGGTGAAAAGGCCTCGGGCTCTAAGTGAATCTATGAACCGCCGGTTGTTTAGAAAATCAGGCGGTGGTGGTGGCGGCGACAACGATGACGACAGATATGAAACCACTATGGTTAGGCGAAAGTCGGAGAGTGCAGCACCTGCAGCTGGTCGAAAATCACAGGGAGGAAGTAGAAGGTCGATGCAGCGTATCAATGAGCTGCCGGAGAAAAAACCCAAAAAGTCTAGCCGTCGTTCATTTATGGGGATTATGAGGAAAAGTCAATCAAATGTTGAAAGCTTCGACATTGAAGAGGGTTCCGATGATGATAACGAGACCGATGACGATGTTAGACCAGATAGTGTCGACGACAAAGTAAGGCAAAGGGAAATGAGGAAGGGTATTGATTTAGCTACTACTCTTGAACGTATAGAGAAAAACTTTGTCATTACTGATCCTAGATTGCCTGACAATCCCATTATATTTGCATCCGATAGCTTCCTGGAGCTAACCGAGTACAGTAGAGAAGAAATCTTGGGAAGAAACTGCAGATTTCTGCAAGGTCCTGAAACCGATCGAGCAACTGTCAAGAAAATAAGAGATGCAATCGACAACCAAACAGAAGTTACAGTGCAGCTTATTAACTACACAAAAAGCGGCAAGAAGTTTTGGAACCTGTTTCATCTACAACCTATGCGTGACCAGAAGGGTGAAGTCCAGTATTTTATTGGAGTACAACTTGACGGTAGTCAACATGTGGAACCGCTAAGCAATTGCATATCGGAAAATACTGCAAAGGAGGGCGAAAAATTGATAAAAGAAACTGCAGAAAATGTTGATATGGCAGCCAGAGAACTTCCTGATGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCTAAGATGGTTCAACCAAAACCTCACAGAAAGGATAGTCCTTCTTGGAAAGCCATCCAGAAGATTTTAGACGGTGGAGAACAGATAGGACTGAAACATTTCAGGCCAGTGAAGCCTTTGGGATCTGGTGATACTGGCAGCGTGCACTTGGTAGAACTGTGTGGGACTGATCAATATTTTGCAATGAAGGCAATGGATAAGGGTGTCATGCTCAACCGCAACAAGGTGCATAGAGCTTGCGCCGAGAGAGAAATACTTGACATGTTGGATCATCCTTTTCTTCCTGCACTATACGCTTCGTTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGTCCTGGTGGAGAACTCTTTCTGCTTTTGGACAGACAACCCACAAAGGTCATAAAGGAAGATGCTGTCAGGTTTTATGCTGCTGAAGTTGTTGTTGCATTGGAGTATCTCCATTGTCAAGGGATAATTTACCGGGATCTAAAGCCTGAGAATGTTCTACTCCAAAGCAACGGACACGTTGCCTTGACGGATTTTGACTTGTCATGTTTGACTTCTTGTAAACCTCAGCTTTTGCTTCCAACAGCAAATGAGAAGAAAAAGCAATCAAGAGCTCAACAGGCTCCGATCTTTATGGCTGAACCTATGCGAGCATCGAACTCCTTCGTCGGAACTGAAGAGTACATAGCACCGGAAATCATTACTGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGGTATCCTTCTATATGAAATGCTTTATGGATACACACCCTTTAGAGGGAAGACAAGGCAAAAGACATTTGCCAACATTCTCCACAAGGATCTTAAATTTCCTAGAAGTATATCGGCTAGTCTCAATGCAAAGCAGTTAATCTTTAGGTTATTGCATAGAGACCCCAAAAACCGATTAGGTTCTCGAGAAGGAGCTAGTGAAATCAAACGACATCCTTTCTTCCGAGGCGTCAATTGGGCGCTCGTTCGTTGCATGAATCCTCCCGAGCTTGAAGCACCTCTTTTCCAGGCTACCGATGCCGAAAAAGATGCTAATAAAGCATCAGATTTTGATATAAAAGAACTTGAACTCAGTGTTTTCTGATCATAAGTTTGTTTGTTGGTTCTGGCTTGCATTCACAAAGAAATGGCTGTCTTCAAATAATTCTTTTATGGTTCATTTGTTTTGATCAAAATCACCTTCCTAGTTCTGCAGCATTGTGGAGCGTTCCAAGCTTGTGAAATTTTTTTAGGATTCAAAGCTTTATTATTATTATTTTTTTTAGTGTTTATTTAATCTTTCCCAATGTAATAAGAATGTTGTAATGTAATGGTGGTTGGTGAAATAGTCTCTTAGCTCTGCTTGTTTTTTAAAA 3305 44.45 MEPLDKPAPKASPLAPFPRDSRGSLEVFNPSSTYSSRSINSISRPNPTWPNWVEPRSSAESDSTKLAAKPASKTGEEITSWMAFKDSNPSPQPSSPLAQKTISSIFSDKSPSGKAKSADEVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNTKQETSRRTSNNTVRSSGDMSEEGGRERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRALSESMNRRLFRKSGGGGGGDNDDDRYETTMVRRKSESAAPAAGRKSQGGSRRSMQRINELPEKKPKKSSRRSFMGIMRKSQSNVESFDIEEGSDDDNETDDDVRPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCISENTAKEGEKLIKETAENVDMAARELPDANLTPEDLWANHSKMVQPKPHRKDSPSWKAIQKILDGGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTDQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVIKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVALTDFDLSCLTSCKPQLLLPTANEKKKQSRAQQAPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRSISASLNAKQLIFRLLHRDPKNRLGSREGASEIKRHPFFRGVNWALVRCMNPPELEAPLFQATDAEKDANKASDFDIKELELSVF 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13622539 13637095 + XM_039045503.1 Bhi10g00628 46969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00628 1008 SUPERFAMILY Protein kinase-like (PK-like) 655 983 IPR011009 -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 136 189 - -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 1 120 - -
Bhi10g00628 1008 Gene3D Transferase(Phosphotransferase) domain 1 759 973 - -
Bhi10g00628 1008 CDD STKc_phototropin_like 673 981 - -
Bhi10g00628 1008 SUPERFAMILY PYP-like sensor domain (PAS domain) 212 304 IPR035965 -
Bhi10g00628 1008 ProSiteProfiles PAC domain profile. 548 602 IPR000700 -
Bhi10g00628 1008 ProSiteProfiles PAC domain profile. 265 319 IPR000700 -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 25 68 - -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 372 387 - -
Bhi10g00628 1008 ProSiteProfiles PAS repeat profile. 478 547 IPR000014 -
Bhi10g00628 1008 TIGRFAM sensory_box: PAS domain S-box protein 218 310 IPR000014 -
Bhi10g00628 1008 TIGRFAM sensory_box: PAS domain S-box protein 499 589 IPR000014 -
Bhi10g00628 1008 Pfam PAS domain 497 589 IPR000014 -
Bhi10g00628 1008 Pfam PAS domain 212 308 IPR000014 -
Bhi10g00628 1008 Gene3D PAS domain 462 627 - -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 81 111 - -
Bhi10g00628 1008 ProSiteProfiles Protein kinase domain profile. 675 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi10g00628 1008 CDD PAS 218 307 IPR000014 -
Bhi10g00628 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Bhi10g00628 1008 Gene3D Phosphorylase Kinase; domain 1 674 758 - -
Bhi10g00628 1008 Pfam Protein kinase domain 678 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi10g00628 1008 CDD PAS 489 589 IPR000014 -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 443 458 - -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 358 470 - -
Bhi10g00628 1008 PANTHER FLIPPASE KINASE 1-RELATED 139 1008 - -
Bhi10g00628 1008 ProSitePatterns Protein kinases ATP-binding region signature. 681 704 IPR017441 GO:0005524
Bhi10g00628 1008 SMART pas_2 476 545 IPR000014 -
Bhi10g00628 1008 SMART pas_2 193 262 IPR000014 -
Bhi10g00628 1008 PANTHER PHOTOTROPIN-1 139 1008 - -
Bhi10g00628 1008 MobiDBLite consensus disorder prediction 152 177 - -
Bhi10g00628 1008 SMART serkin_6 675 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi10g00628 1008 SUPERFAMILY PYP-like sensor domain (PAS domain) 490 589 IPR035965 -
Bhi10g00628 1008 SMART pac_2 268 310 IPR001610 -
Bhi10g00628 1008 SMART pac_2 551 593 IPR001610 -
Bhi10g00628 1008 ProSiteProfiles PAS repeat profile. 191 262 IPR000014 -
Bhi10g00628 1008 Gene3D PAS domain 205 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00405 Bhi-Chr7:18283693 Bhi10g00628 Bhi-Chr10:13622539 2.15E-14 dispersed
Bhi10g00628 Bhi-Chr10:13622539 Bhi10g01274 Bhi-Chr10:29695555 0 dispersed
Bhi10g00628 Bhi-Chr10:13622539 Bhi10g01273 Bhi-Chr10:29695549 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88252 PF00069 Pkinase 3.00E-63 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00628 K20715 - csv:101214662 1859.34