Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00657 AAAACATGATTATTATTTTTTAGCTACAAATTTAAATTAACATCAACTTTTTTAATAATAATATCCCTATTACTCGGTTTCTCTCTCTTCCCTATTTGCTTTGGGATCAAGCTAATTAGTAATTCCCTTTCTTCCCCTTTTGTCTATAAATACCCCCCTCCAATTCTCCATTTCCCCCATCAAATTTCCTCTATCAAATTCTCTCAAATCACCCAATTCCAAAAATCTATACAATTTCATTTCATTTCATTTCTGAGTTAATTAGGTCATTTTGTATTGTTTGAATTCCTACTTATCGATGCCGCCAAAGGGAATGAGGAGTGTGTTCTTTAAATCTCCAACTTCTTCTTCAATACCGAGCACGCCGTCGCCGTCGTCGTCGTCTCACTCGTCTCGCCCCACTTTATCGGATTCAATGGTGGAAGAGAATCTTGAAGTTGCAGAATCGTTTGTGACAAAATGGAGACCTGATTCCACCATTGTTGGTTCTTTGTTTCAAGGGGATGGTCGTGATGAAGCTCGGCAATATATCAAAGCGGTGAAGGGTTTGTATGCTTCCATGCACTGTCTTGCTTCTCGGGATTCATCTTCCAAGAAGCTTATGCGTGCTCATGATTTGATGAAGATTGCCATGGAGAGGCTTCAGAAAGAGTTTTACCAGATTTTGTCTGTTAATCGAGAGTATTTGTATCCAGAACCGGTTTCTAGCGTCCAATCGCCGATGACGTTATCCGCCAGATCGAGTGTTTCTGATTTTGAACTGGAATCGGAAGATGAATTCCGATTTGCTAATGAATCTATTGCGGAGGTTGAGCGAGTTTCTATCTCGGCTATGGCGGATTTGAAAGCAATTGCGGATTGTATGATATCGACTGGCTATGGTAAAGAATGTGTGAAGGTTTATAAAACTGTGAGGAAATCGATTATTGATGAGAGTCTCTATAATCTAGGGATTGAGAAATTGAGTTTTGCGAAAGTTCAGAAGATGGATTGGGAGGTTCTGGAGATCAAAATCAAAATCTGGTTGAAAGGTGTGAAAACGGCAGTGAAGTCTTTGTTTGAAGGAGAAAGAGTCCTTTGCGATCACGTTTTCTCAGCTTCTGTTCCGATCAGAGAATCGTGCTTCGCTCAAATTTCTAAAGATGGAGCAACGATTCTGTTTGAATTTCCAGAATTAGTTGCGAAATACAAAAAAACTCCAGAGAAAATTTTCATTACACTAGATCTATACGAAGCCATAGCCGATCTCTGGCCGGAGATCGATTACATTTTCTCATCCACGGCAACATCAATGGTACAATCTCAAGCCGTCAGTTCACTAATCAAACTCGGAGAGAACATTCGCACATTAATCAACGACTTCGAAATGGCTATTCAGAAAGAATCATCGAAAACGCCTGTTCCTAAAGGCGGAGTTCATCCACTAACTCGCTACGTGATGAACTACATATCTTTCCTCTCAGATTACAGTGGAATACTGAACGACATTGTAGCCGATTGGCCTTTAGCAACGAAATTATCAATGCCAGAATCATACTACGGAACACCTAAAGAAGAAGATAGTCCGATTACCTTACGTTTCGCTTGGTTGATTCTCGTCCTCCTCTGCAAACTCGATGGCAAAGCAGAGTATTACAACGACGTCGCTCTCTCCTACTTGTTCTTAGCGAATAATCTCCATTACGTCGTTGAAAAAGTTCGTACCTCGAATCTGAGATTCATCCTTGGCAACGACTGGATTGAGAGGCACGAATCGAAGATCAAACTGTACTCCTCCAAGTACAGACGCATTGGATGGAATGGAGTGTTCTCGTCGCTTCCGGCGGATGTCACAGCGGGAATATCGCCGGAGGAAGCAAGAGAATCGTTCAGAAATTTCAACAGAGCTTTCGAAGAAACTTACAGAAAACAAGCCTCCTGGATCGTGCCCGATCAGAAGCTTCGCGATGAAATGAAGATTTCACTGGCGAGGGAACTTGGAGCTTTATACGGCGAGTTTTACGCGAGGAATCGGGTTCGGGTGAGGCGGATTTCTGGGTCGGATAATGTGATCCGATTATCCCCTGATGATTTGGGTAATTATTTATCGGATCTGTTCTACGGGTCTGGATCCGAAAGTGTAGGGAGCGGGTCCTCGTCTACTTCATCGTCTCATTCCTCGCCGTCTTCTCGAGGGAGATTCGCCCGTTGACACGTGGCCGCTACCGGCTGTTTTAGATTTTTCTGTGAAAATAATACATTATTTATGTACATAAAATTCTTTCCATTTTTTTATATAATAAATGAATTTAAGTTGGTGAGACACGCTTTCTTCTCATTTATTCCTCAAA 2330 41.72 MPPKGMRSVFFKSPTSSSIPSTPSPSSSSHSSRPTLSDSMVEENLEVAESFVTKWRPDSTIVGSLFQGDGRDEARQYIKAVKGLYASMHCLASRDSSSKKLMRAHDLMKIAMERLQKEFYQILSVNREYLYPEPVSSVQSPMTLSARSSVSDFELESEDEFRFANESIAEVERVSISAMADLKAIADCMISTGYGKECVKVYKTVRKSIIDESLYNLGIEKLSFAKVQKMDWEVLEIKIKIWLKGVKTAVKSLFEGERVLCDHVFSASVPIRESCFAQISKDGATILFEFPELVAKYKKTPEKIFITLDLYEAIADLWPEIDYIFSSTATSMVQSQAVSSLIKLGENIRTLINDFEMAIQKESSKTPVPKGGVHPLTRYVMNYISFLSDYSGILNDIVADWPLATKLSMPESYYGTPKEEDSPITLRFAWLILVLLCKLDGKAEYYNDVALSYLFLANNLHYVVEKVRTSNLRFILGNDWIERHESKIKLYSSKYRRIGWNGVFSSLPADVTAGISPEEARESFRNFNRAFEETYRKQASWIVPDQKLRDEMKISLARELGALYGEFYARNRVRVRRISGSDNVIRLSPDDLGNYLSDLFYGSGSESVGSGSSSTSSSHSSPSSRGRFAR 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14435507 14437836 - XM_039046730.1 Bhi10g00657 46998

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00657 630 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 607 - -
Bhi10g00657 630 Gene3D Exocyst complex component Exo70 59 608 - -
Bhi10g00657 630 SUPERFAMILY Cullin repeat-like 64 600 IPR016159 -
Bhi10g00657 630 MobiDBLite consensus disorder prediction 10 39 - -
Bhi10g00657 630 MobiDBLite consensus disorder prediction 604 630 - -
Bhi10g00657 630 Pfam Exo70 exocyst complex subunit 242 598 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bhi10g00657 630 MobiDBLite consensus disorder prediction 1 39 - -
Bhi10g00657 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 607 IPR004140 GO:0000145|GO:0006887
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00657 K07195 EXOC7, EXO70; exocyst complex component 7 - csv:101212978 1075.85
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi08g00343 Bhi10g00657 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01622 Bhi-Chr3:34318579 Bhi10g00657 Bhi-Chr10:14435507 5.64E-139 dispersed
Bhi07g00980 Bhi-Chr7:32480822 Bhi10g00657 Bhi-Chr10:14435507 0 dispersed
Bhi01g02151 Bhi-Chr1:50512248 Bhi10g00657 Bhi-Chr10:14435507 2.06E-93 transposed
Bhi01g02900 Bhi-Chr1:71888657 Bhi10g00657 Bhi-Chr10:14435507 2.98E-111 transposed
Bhi03g01779 Bhi-Chr3:37436017 Bhi10g00657 Bhi-Chr10:14435507 3.42E-94 transposed
Bhi07g00686 Bhi-Chr7:26421450 Bhi10g00657 Bhi-Chr10:14435507 2.73E-93 transposed
Bhi08g00343 Bhi-Chr8:13717469 Bhi10g00657 Bhi-Chr10:14435507 0 transposed
Bhi08g01084 Bhi-Chr8:35047112 Bhi10g00657 Bhi-Chr10:14435507 2.24E-77 transposed
Bhi08g01486 Bhi-Chr8:43188853 Bhi10g00657 Bhi-Chr10:14435507 2.93E-99 transposed
Bhi10g00657 Bhi-Chr10:14435507 Bhi11g02203 Bhi-Chr11:60768926 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g377 . . Bda02g00802 Bda09g01492 Bpe01g00153 . Bma14g00483 . . . . . . . Sed13g1351 Cpe05g00891 . Bhi08g00343 Tan01g2524 Cmetu12g0712 . . . Lcy11g0247 Cla02g01331 Cam02g1412 Cec02g1430 Cco02g1463 Clacu02g1391 Cmu02g1351 Cre02g1670 Cone1ag0674 Cone5ag1180 Cone18ag0321 Cone11ag1266 . Csa06g01715 . Cme11g01259 Blo13g01090 Blo14g00136 Bda07g00609 . Bpe08g00122 Bpe11g00785 Bma07g00116 Bma11g00137 Sed01g0928 Cmo02g00840 Cmo20g00472 Cma02g00839 Cma20g00434 . . . . Bhi10g00657 Tan05g0340 Cmetu11g2447 . Hepe08g0821 . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g00686 . 12 653 EXO70 exocyst subunit family AT5G03540 75.3 6.3e-280 960.7
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G03540 70.7 4.9e-264 907.9
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G52340 79.3 2.3e-295 1011.9
Bhi07g00686 . 14 653 EXO70 exocyst subunit family AT5G52340 74.1 7.4e-270 927.2
Bhi03g01779 . 145 631 EXO70 exocyst subunit family AT5G52350 63.5 2.2e-175 613.2
Bhi07g00686 . 149 653 EXO70 exocyst subunit family AT5G52350 58.7 1.5e-163 573.9
Bhi08g00441 . 1 623 EXO70 exocyst subunit family AT5G58430 67.2 1.3e-247 853.2
Bhi08g00441 . 1 622 EXO70 exocyst subunit family AT1G07000 52.4 2.1e-173 606.7
Bhi01g03318 . 60 673 EXO70 exocyst subunit family AT5G13150 52.8 8.4e-176 614.8
Bhi12g01225 . 105 716 EXO70 exocyst subunit family AT5G13990 54.5 3.4e-191 666.0
Bhi01g02900 . 9 609 EXO70 exocyst subunit family AT1G72470 65.0 1.6e-216 750.0
Bhi01g02900 . 9 607 EXO70 exocyst subunit family AT1G54090 62.2 2.5e-209 726.1
Bhi01g02900 . 9 608 EXO70 exocyst subunit family AT3G14090 63.9 5.0e-218 755.0
Bhi08g01486 . 18 657 EXO70 exocyst subunit family AT5G50380 62.2 9.3e-226 780.8
Bhi04g01091 . 13 682 EXO70 exocyst subunit family AT4G31540 73.9 2.5e-295 1011.9
Bhi07g00980 . 58 614 EXO70 exocyst subunit family AT3G55150 50.5 3.2e-148 523.1
Bhi07g00980 . 31 613 EXO70 exocyst subunit family AT2G39380 50.6 4.8e-152 535.8
Bhi11g02203 . 27 631 EXO70 exocyst subunit family AT3G09520 54.8 1.7e-178 623.6
Bhi10g00657 CCT 35 608 EXO70 exocyst subunit family AT5G59730 50.4 7.4e-153 538.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001818 3 2 3 3 3 2 0 2 2 2 2 2 3 2 2 3 2 4 4 2 2 2 2 2 3 3 2 2 2 0 68
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi10g00657 Bhi_Chr10 FPKM 14.929487 12.444871 10.954793 9.589483 14.637273 13.882051 14.211264 10.378283 10.233199 10.11469