Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00687 ACTGCTCTCTTCCGGCATATCTTCCTTTCTCTTTCTTGAGTCTTCATCTTTCCTGTTAGAAGCATTCTCTCTCACGGGGCGATTATGGAGAGATGTTTTCAACATCACGGCGAGACTTGGCTGGCCAACACGCAAAGATTTTGGAGAATTTGATGCGATTTCTTTCCTTTGTTTGTTTCTGTTTGTTGTTGTAGGCGGTTATTTTGAGAGATTTTTTTTGTTTGGATTGAGAGATTATGGAGGAGGACAATAATGGCGGCTCCTTTCGGAGTTTGATCGACTTGGTGAACGATGTAGCTTCAATCTCAGACTACAGGTACGCGGTCAGAAAGCAGTATTGTAATTTAGCTAGGCGACTGAAGCTGTTGATCCCATTGTTTGAGGAGATGAGGGATATCAAGCAGCCGCTGCCTGATGATACCGTTAGAGCTCTTGCTTCGTTGAAAGAAGCTCTGGAATCGACCAAGGAGTTGCTTAGACAAGGGAGCGAGGGGAGCAAGATTTATCTGGCCTTGGATAGAGAGCAAATCTTGAATCAATTTCACGAGGTGACAGCTAGACTAGAGCAAGCTCTGAATGAAATTTCACATGAAGATCTTGACATATCTGATGAAGTTAAGGAGCAGGTTGAGCTTGTTCTCTCTCAATTCAGAAGAGCTAGAGGAAGGAATGATACACAAGATGCCGAGGTGTATGTTAACCTCAACTCTCTATATAACAACAACAGAGACTCTGCTGATCCTTCTATCTTGAAAGTACTGGCTGAGAAGTTGCAACTGATTGTTATAGCTGATCTTACTCAAGAGTCTCTTGCTTTACATGAAATGGTTTTGGCTAGTGATGGAGATCCAGGGGGGCGATTTGAGAAAATGTCAATATTATTGAAGAAAATAAAAGATTTTATGCTAACTGAAAACCCTGAAATTGGTCTTTCTTCAAAAGAACAAAGTCATCCTCGCACTGGTGGACAAGTGTCTGCTGGTAAGAAAGATATAGTGTCCCTCCACATACCTGAAGACTTTCGGTGCCCCATATCCCTGGATTTGATGAAAGATCCCGTCATTGTCTCCACGGGACAGACCTATGAACGTGCGTTCATTGAGAAGTGGCTGGCAGATGGACACTCGACATGCCCGAAAACTCAACAAGTTCTCACTAGCAAAATTCTTACACCAAATTATGTTTTACGTAGTCTCATAGCTCAATGGTGCGAGGTCAATGGGATTGAACCACCACAACGTTCCAGCAGTTCTCAGCCCAGTAAGTTGACTCCGGCTGAACGCTCCAAGTATGAAGCTCTACTCCACAAACTCGCATCAGGCAACATTGAAGACAAGCGATCTGCTGCTGGTGAGATTCGCCTTCTAGCCAAACGCAATGCAAATAATCGTGTGGCCATTGCTGAAGCTGGTGCAATCCCTCTCCTCGTTGATCTCCTTTCAACAACAGACCCCCTCACTCAAGAACATGCTGTGACAGCGTTACTTAACCTTTCAATTTGTGATAATAATAAGAGAAGCATCATGTCCTGTAGGGCAGTGCCTGCGATAGTCCATGTGCTGAAGTGGGGGAGTATGGAAGCACGTGAAAATGCTGCTGCCACTCTTTTCAGTCTCTCGGTTGTAGACGAATATAAAATAATGATCGGCGCATCGGGAGCCATTCTGCCACTTATTGCGCTACTCAATGAAGGTACTCAAAGGGGGAAGAAGGATGCTGCAACCGCTCTTTTCAACTTGTGTTTCTTCCAAGGGAACAAGATAAAGGCAGTCAGGGGTGGTGTTGTTTCCATACTGGTGCAGCTGTTGACAGAATCTAGAATAGGGATGGTAGATGAGGCACTAGCAATTTTAGCCATACTAGCCAGCAATTCGGAAGGGCGGGCTGCGATTGGAGCAGCCGAATCTGTCCCCATTTTAGTAAATTTCATTGGAACAGGATCCCCTAGGAACAGGGAAAATGCAGCTGCAGTTTTGGTGCATCTTTGCATGGGAGACAAACGACATCTCGTCAAAGCGAAGGAGCTCGGAGTGATTGGTTTGCTTATGGATTTGGCAGAAAATGGCACGGACCGAGGTAAGCGAAAAGCAACACAATTGCTTGACCAAATAAACAGGTTTACAGAGCTGCAGAAAGAGGCTGAGGTTCAATCCCAGTCTCAAACCCAGCTGTTGCTACCGCCGCCACTACCTTCCACAATCGGCGACGTCGAAAGCTGACCAGAATTGGATTTGCCGGTGAAGGAAAATGGCAGCCGCCGGCCAAGAGCCCCGCCGTGCCGACACGTCGTGTTAAAATATTTTCTTGAAGACGATTGATGAAAATTGTGGGTAAGTAACGTATGATTTCTGGAAGTTGAGTGGACAAGTCAATGTACGACGCATCGCTTGGTACGTTGACTTGAATCTGAATTCCACTTTTTCCCTCCTTTTTGTTGGGACATTTCCTCCTATTAATTATCAATAATAATTATGTAAATTTTTTGCACATACAATAAGCAAATTAAATTTAGGTTTTAA 2519 44.54 MEEDNNGGSFRSLIDLVNDVASISDYRYAVRKQYCNLARRLKLLIPLFEEMRDIKQPLPDDTVRALASLKEALESTKELLRQGSEGSKIYLALDREQILNQFHEVTARLEQALNEISHEDLDISDEVKEQVELVLSQFRRARGRNDTQDAEVYVNLNSLYNNNRDSADPSILKVLAEKLQLIVIADLTQESLALHEMVLASDGDPGGRFEKMSILLKKIKDFMLTENPEIGLSSKEQSHPRTGGQVSAGKKDIVSLHIPEDFRCPISLDLMKDPVIVSTGQTYERAFIEKWLADGHSTCPKTQQVLTSKILTPNYVLRSLIAQWCEVNGIEPPQRSSSSQPSKLTPAERSKYEALLHKLASGNIEDKRSAAGEIRLLAKRNANNRVAIAEAGAIPLLVDLLSTTDPLTQEHAVTALLNLSICDNNKRSIMSCRAVPAIVHVLKWGSMEARENAAATLFSLSVVDEYKIMIGASGAILPLIALLNEGTQRGKKDAATALFNLCFFQGNKIKAVRGGVVSILVQLLTESRIGMVDEALAILAILASNSEGRAAIGAAESVPILVNFIGTGSPRNRENAAAVLVHLCMGDKRHLVKAKELGVIGLLMDLAENGTDRGKRKATQLLDQINRFTELQKEAEVQSQSQTQLLLPPPLPSTIGDVES 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15015036 15019779 - XM_039045537.1 Bhi10g00687 47028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00687 660 Gene3D - 339 649 IPR011989 -
Bhi10g00687 660 Gene3D - 9 119 IPR036537 GO:0007166
Bhi10g00687 660 MobiDBLite consensus disorder prediction 639 660 - -
Bhi10g00687 660 CDD RING-Ubox_PUB 262 304 IPR045210 -
Bhi10g00687 660 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 392 430 IPR000225 GO:0005515
Bhi10g00687 660 SUPERFAMILY ARM repeat 353 625 IPR016024 -
Bhi10g00687 660 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 331 IPR013083 -
Bhi10g00687 660 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 11 639 - -
Bhi10g00687 660 Coils Coil 95 115 - -
Bhi10g00687 660 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 515 552 IPR000225 GO:0005515
Bhi10g00687 660 SUPERFAMILY RING/U-box 252 332 - -
Bhi10g00687 660 SMART Ubox_2 261 324 IPR003613 GO:0004842|GO:0016567
Bhi10g00687 660 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842|GO:0016567
Bhi10g00687 660 Pfam Armadillo/beta-catenin-like repeat 464 502 IPR000225 GO:0005515
Bhi10g00687 660 Pfam Armadillo/beta-catenin-like repeat 382 420 IPR000225 GO:0005515
Bhi10g00687 660 Pfam U-box domain 258 328 IPR003613 GO:0004842|GO:0016567
Bhi10g00687 660 SMART arm_5 381 421 IPR000225 GO:0005515
Bhi10g00687 660 SMART arm_5 463 503 IPR000225 GO:0005515
Bhi10g00687 660 SMART arm_5 504 544 IPR000225 GO:0005515
Bhi10g00687 660 SMART arm_5 545 585 IPR000225 GO:0005515
Bhi10g00687 660 SMART arm_5 422 462 IPR000225 GO:0005515
Bhi10g00687 660 PANTHER U BOX DOMAIN-CONTAINING 11 639 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00620 Bhi-Chr8:20447784 Bhi10g00687 Bhi-Chr10:15015036 0 dispersed
Bhi10g00687 Bhi-Chr10:15015036 Bhi12g00879 Bhi-Chr12:26656113 3.92E-116 dispersed
Bhi10g00687 Bhi-Chr10:15015036 Bhi10g00688 Bhi-Chr10:15015352 0 tandem
Bhi04g01196 Bhi-Chr4:28978556 Bhi10g00687 Bhi-Chr10:15015036 4.16E-32 transposed
Bhi06g01042 Bhi-Chr6:28529291 Bhi10g00687 Bhi-Chr10:15015036 1.44E-67 transposed
Bhi07g01714 Bhi-Chr7:47488452 Bhi10g00687 Bhi-Chr10:15015036 2.74E-75 transposed
Bhi08g01590 Bhi-Chr8:45594440 Bhi10g00687 Bhi-Chr10:15015036 7.01E-83 transposed
Bhi08g02151 Bhi-Chr8:61636478 Bhi10g00687 Bhi-Chr10:15015036 1.22E-97 transposed
Bhi09g02587 Bhi-Chr9:70208718 Bhi10g00687 Bhi-Chr10:15015036 1.13E-08 transposed
Bhi10g00687 Bhi-Chr10:15015036 Bhi08g00619 Bhi-Chr8:20447784 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00687 - - csv:101221150 1126.69