Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00718 TTCTCCTGCATAAGTACTCCACCATCCCAATCCTTCACCCATCATCCCCATTTCTCTCCCTCTTCCCATAAACGCGTTTCTCCTCTAATCTTTTTCATTAAAAAAACAAAATGGCCACCATAATTTCTCTCTGCATTGCCTCTCTTCTCTCATTTTCCCTACTTGTCGATGCTAGAATCCCCGGAGTTTACTCCGGCGGCCCTTGGCAGAGCGCCCACGCCACTTTCTACGGAGGCGCCGACGCTTCCGGCACCATGGGTGGAGCTTGTGGGTACGGGAATCTGTACAGCCAAGGCTATGGTGTGAACACGGCGGCGCTGAGTACCGCGCTGTTCAATAAGGGTCAGAGCTGCGGCGCTTGCTTTGAAATTAAGTGTGCTAATGACCCAAGATGGTGTCATTCCGGTAGTCCCTCGATCTTGATTACTGCTACTAATTTCTGCCCGCCTAACTACGCCCTTCCTAACGACAATGGCGGCTGGTGTAACCCTCCACGGACTCACTTTGACCTTGCCATGCCTATGTTCCTTAAAATCGCTGAGTACCGCGCCGGAATCGTCCCCGTGTCTTACCGCCGAGTGCCATGCCGGAAGCAAGGAGGAATCAGGTTCACAATAAACGGCTTCCGTTACTTCAATTTGGTTCTAATCACCAACGTGGCAGGTGCAGGGGATATCGTGAGGGTTAGCGTTAAAGGAACAAGAACCGGATGGATGAGCTTAACTAGAAACTGGGGGCAAAATTGGCAATCCAATGCGGTTTTAGTGGGCCAGGCTCTTTCTTTTAGAGTTACCGGCAGTGACCGACGAACCTCAACGTCATGGAACATAGTCCCAGCCCATTGGCAGTTCGGCCAAACTTTCACTGGCAAGAACTTCCGTGTTTAACCGCAAGTTAACATTTTTACTGTGCTTTTTTTCTTGGAATTTACAGTTTTAACCTTTGTGGAAGTGTTGGTTTTTCTTTTTTCTTATGAGACTAATCTGATCTGAGCGTAATTTAAAGCAAGGATTGGGGGTATTATTGGAAAAGTATTTTGACTGGGGTTGGGTTATGGTTAAGTGAAAAGTGTAAAGGCTGAAGCGGCTGAATGAAGATTGTAAGCCCGCAGTCTTTGTTTTATAGACCATTTGAGTGTCACAGATTTATTTGTATTAATTTCTACTACTAAAATTATTATGAGTGTAATTTGTGTA 1196 46.49 MATIISLCIASLLSFSLLVDARIPGVYSGGPWQSAHATFYGGADASGTMGGACGYGNLYSQGYGVNTAALSTALFNKGQSCGACFEIKCANDPRWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVRVSVKGTRTGWMSLTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIVPAHWQFGQTFTGKNFRV 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15399062 15401246 - XM_039044533.1 Bhi10g00718 47059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00718 258 PANTHER EXPANSIN-A15 5 257 IPR002963 GO:0009664
Bhi10g00718 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 164 IPR007112 -
Bhi10g00718 258 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Bhi10g00718 258 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Bhi10g00718 258 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Bhi10g00718 258 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Bhi10g00718 258 PRINTS Expansin/Lol pI family signature 201 215 IPR007118 GO:0005576
Bhi10g00718 258 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Bhi10g00718 258 PANTHER EXPANSIN 5 257 - -
Bhi10g00718 258 Pfam Expansin C-terminal domain 165 242 IPR007117 -
Bhi10g00718 258 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 122 139 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 139 152 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 163 175 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 175 196 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 210 231 IPR002963 GO:0009664
Bhi10g00718 258 PRINTS Expansin signature 239 255 IPR002963 GO:0009664
Bhi10g00718 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 253 IPR007117 -
Bhi10g00718 258 Gene3D - 20 160 IPR036908 -
Bhi10g00718 258 SUPERFAMILY Barwin-like endoglucanases 31 182 IPR036908 -
Bhi10g00718 258 Gene3D - 164 256 IPR036749 -
Bhi10g00718 258 Pfam Lytic transglycolase 67 154 IPR009009 -
Bhi10g00718 258 SMART dpbb_1 67 154 IPR007112 -
Bhi10g00718 258 SUPERFAMILY PHL pollen allergen 161 253 IPR036749 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi08g00598 Bhi10g00718 CCT
Bhi08g00598 Bhi10g00718 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00459 Bhi-Chr7:20231745 Bhi10g00718 Bhi-Chr10:15399062 1.56E-126 dispersed
Bhi07g01546 Bhi-Chr7:44523309 Bhi10g00718 Bhi-Chr10:15399062 1.76E-126 dispersed
Bhi12g01202 Bhi-Chr12:35941924 Bhi10g00718 Bhi-Chr10:15399062 2.25E-43 dispersed
Bhi03g02000 Bhi-Chr3:42858229 Bhi10g00718 Bhi-Chr10:15399062 4.15E-174 transposed
Bhi06g00614 Bhi-Chr6:13913187 Bhi10g00718 Bhi-Chr10:15399062 9.26E-154 transposed
Bhi10g00718 Bhi-Chr10:15399062 Bhi06g00957 Bhi-Chr6:26359497 3.76E-168 wgd
Bhi10g00718 Bhi-Chr10:15399062 Bhi08g00598 Bhi-Chr8:19742027 4.04E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00718 - - csv:101203979 531.946