Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00845 ATGAGAATCGGTTCATCGCCTTGTGCCTCTTGCAAATTGCTACGGCGGCGTTGTGCAAAAGATTGCATTTTTGCGCCTTATTTTCCTCCCGATGATCCTCTCAAATTCGCCATTGTTCATAAGATCTTCGGTGCTAGCAATGTCAGCAAAATGTTGCAGGAGGTTTCAGTAGAACAAAGAACAGATGCAGTGAACAGTATGGTATATGAAGCGAGTGCAAGAATGAGGGATCCAGTATACGGTTGTGTAGGGACAATCTCGTTTCTACAAAACGAAGTGTCTCGATTGGAAATACAACTAGGGGCAGCACAAGCGGAGATTTTGACCTTACAGATGCAGCAACAGCAGGCTCCGATGACGACGACCACCCAAATGGATCAAGATGATCAAAATCTTGTTATTTTCTCAAATGTTGATTCTTCTAATTCCTTCCATACTTTCCAGGAAATGGAGGATTATTACCCTCTATGGACTTGAATAATTTTCATGACTATTATTATTTTTAATTAATCAAAGTGTAACAGAAGGTATATAATACATATGTAAACATAAACATAAATATAAATGTTTCCAA 574 38.85 MRIGSSPCASCKLLRRRCAKDCIFAPYFPPDDPLKFAIVHKIFGASNVSKMLQEVSVEQRTDAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILTLQMQQQQAPMTTTTQMDQDDQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17099147 17100091 - XM_039046669.1 Bhi10g00845 47186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00845 158 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 127 - -
Bhi10g00845 158 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Bhi10g00845 158 Coils Coil 86 113 - -
Bhi10g00845 158 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Bhi10g00845 158 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00916 Bhi-Chr8:30291794 Bhi10g00845 Bhi-Chr10:17099147 4.06E-53 dispersed
Bhi10g00583 Bhi-Chr10:12863761 Bhi10g00845 Bhi-Chr10:17099147 8.21E-50 dispersed
Bhi10g00845 Bhi-Chr10:17099147 Bhi10g00963 Bhi-Chr10:19755429 3.59E-54 dispersed
Bhi11g01604 Bhi-Chr11:46239538 Bhi10g00845 Bhi-Chr10:17099147 9.18E-50 dispersed
Bhi08g00311 Bhi-Chr8:12151894 Bhi10g00845 Bhi-Chr10:17099147 1.86E-52 transposed
Bhi08g00414 Bhi-Chr8:15360528 Bhi10g00845 Bhi-Chr10:17099147 8.64E-59 transposed
Bhi10g00845 Bhi-Chr10:17099147 Bhi07g00520 Bhi-Chr7:21686378 1.13E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2140 PF03195 LOB 9.20E-40 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00845 - - csv:101207667 250.751