Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00921 GGTTTAACTAGGTTCGTTTGTCCTCAGTGCGCGGTTGACCTCACCGTCGATCTCTCTAAGCTCCATCAGTTCTTCCCCTCCCGGCCGCCTCCTGAGGAAGTCAACGAGGGGTTTAGTACTGTGTTAAAAGCCTCATGAGGCATGTGCTTAGACATTCATGAGGTAGCCATTGAAGTGGAAAGAGAAGAAGATGAAGGTGGTACAGTGGGAGAGACATTTACAGAATATCACCCTCCTAAGCTATCTATAGGACCACTTCACCCGGACCCAGTTGTGGAGACATCCTCCTTATCTGCTGTCCAGCCTCCTGAACCCACTTATGATTTAAAAATCAAGGATGATTTAGAGAAGTCAAAAGCTCTTTCATGCTTGCAAATTGAGACCTTGGTATATGCTTCTCAGAGACATATGCACCACCTCCCAGATGATACCAGGGCGGGATTCTTTATTGGAGATGGAGCTGGTGTTGGTAAAGGTCGGACCATTGCCGGTTTATTGTGGGAAAATTGGCACCATGGGAGGAGGAAAGCAATGTGGATTTCGGTTGGTTCAGATTTGAAGTACGATGCTAGGAGAGACTTAGATGATGTTGGTGCATCGTGCATTAAAGTGCATGCTTTGAACAAGCTGCCATATTCAAAGCTTGACTCAAAGTCTGTGGGTATTAGAGAAGGAGTTGTCTTTTTGACGTATAGCAGCCTCATAGCATCTTCTGAACGAGGCCGTTCTCGCCTGCAGCAGCTTGTTCAGTGGTGTGGAACAGAATTTGATGGTCTCGTCATATTTGATGAGTGCCATAAAGCCAAAAATTTGGTACCAGAATCTGGAAGCCAGCCAACGAGGACAGGAGAAGCCGTTCTAGAGCTGCAGGATCGACTTCCTGAAGCTCGTATAATTTACTGCTCAGCCACCGGTGCATCTGAGCCACGCAATATGGGCTATATGGTCCGACTTGGGCTTTGGGGAACTGGAACTTCCTTCATTGACTTCCGGGATTTTTTAGGTGCACTAGAGAGAGGGGGTGTTGGGGCTTTAGAACTTGTTGCCATGGACATGAAAGCAAGGGGTATGTATTTGTGCCGCACGCTTAGCTACAGAGGAGCCGAATTTGAGATTGTGGAAGCACCATTAGAAGCTGAGATGATGGAAATGTATACACTAGCAGCTGAATTTTGGGCAAAGTTGCGGGTAGAATTGATGACAGCAAGTGCATATGTTACTAGTGACAAGCCTAGTGCCAATCAACTTTGGCGATTATTTTGGGCAAGCCATCAGCGTTTCTTCAGGCACATGTGTATGTCTGCCAAGGTTCCTGCTACTGTTAGACTAGCTAAGCAAGCATTATTGGAAGATAAGTGTGTCGTCATTGGTCTGCAAAGTACTGGAGAGACACGCACTGAGGAAGCTGTGACAAAATATGGTCTTGAGCTTGATGATTTTGTTTCTGGACCTCGAGAACTATTGCTTAAATTTGTGGAAGAAAACTACCCTTTGCCTGAAAAGCCCGAAACCCTACCTGAGGAGGGAAGTGTCAAGGAACTTCAAAGGAAGAGACACTCGGCAACTCCTGGCACATCACTAAATGGGAGGGTAAGGAAGGCTGCAAAGTGGAAACCTCCAAGTGATGTCGAAAGTGATGAAGAATCTGAAACTGATTCTGCTGCTGAATCTACCGAATCAGATGATGAGTTTCAGATTTGTGAGATATGCAATGCCGAAGGGGAAAGGAAAAAATTACTTCGATGTTCCTGTTGTGAGCAATTTTTTCATCCTGCCTGTCTCGACCCTCCTCTCTTGGATACAGAAACTGCAGAATGGTCATGTGAATCTTGCAAGGAGAAGACAGATGAGTATCTTAAAGAAAGAAAAGCTGTTATAGCTGAACTTTTGAAAAGGTATGATGCTGCTTCAGATCGTAAGTCTAATTTGTTGGCAATTATTCGTTCATTGAATCTTCCAAACAATCCTTTGGATGATATTATTGATCAGCTTGGTGGCCCTGATAAGGTTGCAGAAATAACCGGAAGAAGGGGAATGCTTGTAAGGGCCCCCAATGGAAAGGGTGTTACTTACCAGCCACGGAACTCGAAGGATGTGGCTATGGAGATGGTCAATATGCATGAGAAACAACTGTTTATGGATGGTAAGAAGTTTGTTGCTATCATTTCTGAAGCTGGATCTGCTGGTGTTTCACTGCAGGCAGACAGAAGAGCTGCAAATCAGAAAAGAAGAGTTCATTTTACTTTAGAACTCCCTTGGAGTGCTGATCGAGCTATTCAACAATTTGGACGGACTCATCGCTCTAATCAAGCTTCAGCACCAGAATACAGGCTACTTTTTACGAATCTCGGTGGAGAACGCAGGTTTGCATCAATTGTTGCCAAGAGATTAGAATCGCTTGGAGCCTTAACTCAAGGAGATCGAAGGGCCGGGTTGTCACTAAGTGCATACAATTATGACAGTGCTTATGGGAGAACGGCCTTGACGATGATGTATAGAGGAATAATGGAGCAGGATGCCCTGCCCGTTGAACCTCCTGGTTGCTCATTTGAGAAACCTGATACAATCCGCGATTTTATTGAGAATGCAAAAGCTGCTCTTAATTCTGTGGGAATAATTAGGGACACTGTACTTGGGACTGGAAAGGACTTTGGAAAGACCTCTGGTCGTATTGTTGAGTCAGACATGAATGATATTGGACGTTTTCTTAATCGACTTTTGGGCCTCCCGCCTGAGATTCAGAATAGGATTTTTGAGTTATTTGTCAGCATGTTGGATCTTCTAATTCAGAAAGCACGCATTGAAGGGAATCTTGATTCTGGAATTGTTGATATGAGAGCCAATGTTATTGAATTAAGAGGAAGTCCAAAGACAGTTCATGTTGATCCGGTTTCTGGGGCATCAACTATGCTGTTTACTTTCTCTTTGGATCGTGGTATGACCTGGGAGTCTGCAAGCACCATTCTTGATGAGAAGCAAAAGGATGGGCTTGGTTCAACCAATGATGGATTCTATGAATCCAGGAGGGACTGGTTGGGAAGATGCCACATCATATTAGCCTTTGAAAGTTCCGTTCCTGGAATGTATAAAATTGTACGCCCAGCTGTTGGGGAGTCGCTAAGGGAAATGTCTCTCTCTGAGTTACGGAACAAATACCGAAAAACATCATCTTTGGAGAAGGCTCGTAATGGGTGGGAAGATGAGTATGACATTTCCTCAAAACAGTGCATGCATGGACCAAATTGTAAGCTTGGCAACTTTTGTACGGTTGGCAGGAGAATACAGGAAGTTAATGTTTTGGGTGGCCTTATTCTTCCTGTTTGGGGAACTATTGAAAATGCCCTTTCTAAGCAGGCCCGCCAAAGTCACCAGCGGCTTCGTGTAGTACGTATAGAAACCACAACAGATAGACAGAGAATAGTTGGTCTGTTTGTTCCAAATGCAGCAGTTGATTCAGTGCTTCGAGGTTTGGCATGGGTACAAGATGTAGATGATTGAAATCAAAGTAGTGATTCTGTTTTATCCGTGTACTATTTGTGTGCTGCTCCTAACAAGAAGCTTCAGTTTTTTGGAGGAGTTTGAAGAACAGCTGATTCTATTTTTTTCTGCACCGTGCGATGGAAACTGTGCAGTCTTATAGTTATTATTTTTTTGGGGTATATATGATTTGTATATTTGGCAATGCTGCGTTAGATGATATTAGGAGGAGCATTATGTTAATGTTTATTATCCCTTCTAAATCCTAATCTTAATTTCATTTTCATTTTCTTTTGTATGTATATCCAATTACAGTTGGAAATAGAAAATCTCCCCCCTTTGTACAATTTTTTGATTGGTTGAACCAACAGAAATTCCATATTTAATATATTCGTGCTTACGTTTCCATA 3887 43.35 MCLDIHEVAIEVEREEDEGGTVGETFTEYHPPKLSIGPLHPDPVVETSSLSAVQPPEPTYDLKIKDDLEKSKALSCLQIETLVYASQRHMHHLPDDTRAGFFIGDGAGVGKGRTIAGLLWENWHHGRRKAMWISVGSDLKYDARRDLDDVGASCIKVHALNKLPYSKLDSKSVGIREGVVFLTYSSLIASSERGRSRLQQLVQWCGTEFDGLVIFDECHKAKNLVPESGSQPTRTGEAVLELQDRLPEARIIYCSATGASEPRNMGYMVRLGLWGTGTSFIDFRDFLGALERGGVGALELVAMDMKARGMYLCRTLSYRGAEFEIVEAPLEAEMMEMYTLAAEFWAKLRVELMTASAYVTSDKPSANQLWRLFWASHQRFFRHMCMSAKVPATVRLAKQALLEDKCVVIGLQSTGETRTEEAVTKYGLELDDFVSGPRELLLKFVEENYPLPEKPETLPEEGSVKELQRKRHSATPGTSLNGRVRKAAKWKPPSDVESDEESETDSAAESTESDDEFQICEICNAEGERKKLLRCSCCEQFFHPACLDPPLLDTETAEWSCESCKEKTDEYLKERKAVIAELLKRYDAASDRKSNLLAIIRSLNLPNNPLDDIIDQLGGPDKVAEITGRRGMLVRAPNGKGVTYQPRNSKDVAMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQKRRVHFTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRAGLSLSAYNYDSAYGRTALTMMYRGIMEQDALPVEPPGCSFEKPDTIRDFIENAKAALNSVGIIRDTVLGTGKDFGKTSGRIVESDMNDIGRFLNRLLGLPPEIQNRIFELFVSMLDLLIQKARIEGNLDSGIVDMRANVIELRGSPKTVHVDPVSGASTMLFTFSLDRGMTWESASTILDEKQKDGLGSTNDGFYESRRDWLGRCHIILAFESSVPGMYKIVRPAVGESLREMSLSELRNKYRKTSSLEKARNGWEDEYDISSKQCMHGPNCKLGNFCTVGRRIQEVNVLGGLILPVWGTIENALSKQARQSHQRLRVVRIETTTDRQRIVGLFVPNAAVDSVLRGLAWVQDVDD 1118
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 18907019 18932882 - XM_039045141.1 Bhi10g00921 47262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00921 1118 PANTHER STRAWBERRY NOTCH-RELATED 15 1118 IPR026741 GO:0006355
Bhi10g00921 1118 Gene3D - 69 269 IPR027417 -
Bhi10g00921 1118 ProSitePatterns Zinc finger PHD-type signature. 520 564 IPR019786 -
Bhi10g00921 1118 MobiDBLite consensus disorder prediction 452 472 - -
Bhi10g00921 1118 ProSiteProfiles Zinc finger PHD-type profile. 517 567 IPR019787 -
Bhi10g00921 1118 Pfam PHD-finger 519 567 IPR019787 -
Bhi10g00921 1118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 494 580 IPR013083 -
Bhi10g00921 1118 MobiDBLite consensus disorder prediction 498 513 - -
Bhi10g00921 1118 SMART PHD_3 519 565 IPR001965 -
Bhi10g00921 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 663 763 IPR027417 -
Bhi10g00921 1118 PANTHER OS08G0223700 PROTEIN 15 1118 - -
Bhi10g00921 1118 Pfam C-terminal domain on Strawberry notch homologue 608 897 IPR026937 -
Bhi10g00921 1118 MobiDBLite consensus disorder prediction 452 513 - -
Bhi10g00921 1118 SUPERFAMILY FYVE/PHD zinc finger 510 570 IPR011011 -
Bhi10g00921 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 282 IPR027417 -
Bhi10g00921 1118 Pfam P-loop containing NTP hydrolase pore-1 40 338 IPR039187 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00918 Bhi-Chr10:18907019 Bhi10g00921 Bhi-Chr10:18907019 0 dispersed
Bhi10g00919 Bhi-Chr10:18907019 Bhi10g00921 Bhi-Chr10:18907019 0 dispersed
Bhi10g00920 Bhi-Chr10:18907019 Bhi10g00921 Bhi-Chr10:18907019 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2147 PF13872 AAA_34 1.40E-132 CL0023 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00921 - - csv:101218295 2112.42