Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00922 TAATCTTTTACTTCTTTTGAATGGGTTGAGTTCCTGCTCACAAAGGTGATGTTACATCACAATTTGAGCCCCCCTTTTTCTCCCTTTATTCACCCATCCCACATCGAAAAAATTTCGATTTATTTTCGGTACAAAAATCTCTGAAATTCACCGGTTTCCTCATCTCCAGAATCCAATTCCTTTCTTCCTTTCTGTCGATTTCTCTACTTTTCGAAACCCAAGCTCTACAATATGCCCTAAACCTGGTTGAACGATATGGGAGGCTGGGCCAGCTCGTCTGCTAAACGGAGGAACGGCGGCGAAAAGGGTGGAAAAACGGCTGCCGTCAGCAAAGAACCACCGTCGCTTAAGAAGACTGACAGTGGTAGCGGCGGTGGCGGAAGCAGCCGTGGAAAGTCGTTGTGCCGGCCTGAGAAGAAGGTTTATTTCCCGAAGAAATATGGTTTCATTGCAGATAATTTCTCCTCTATTGACCAGGTTACCGCAGCCTTGAGAAAAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATGGATTTCACCAAAAGCAACGAGTGGACAGGTAAAGTATCGTTCAATAATCGGAGCTTGCACGCCGTTTCTGATTCTCCTAATCCCTACGAAAATGCTCTGTCAATCATCGGGAAAACTCTGGCTCCCTTCGACGACGACAGCTTAATTCCTTGCTTTGGTTTCGGCGACGCAACGACGCACGATCAAACGGTGTTCGGTTTTCACAGTGATAATACTCCGTGCCATGGATTCGAAGAAGTTATTGACTGCTACAAAAATATAATTCCGAATGTGCAACTTTCAGGGCCAACTTCTTACGGTCCTGTGGTTGAAGCTGCAATGGATATTGTGGAGAAGAGTGGTGGACAATTTCATATTCTTCTTATTGTTGCAGATGGACAAGTTACTCGAAGCTCCAGTGTTGGCGATGACGAATTGAGCGTTCAAGAGGAGAAAACAATCAAAGCAATTGTCGATGCAAGTGCATATCCTCTTTCGATTGTTCTTGTTGGAGTTGGAGATGGCCCTTGGGACAACATGAAGAAGTTCGACGACAAGATCCCAGCTCGGGATTTCGATAATTTTCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAACCTCGGCACGCCCGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTAATGGAGGTTCCTTTCCAGTACAAAGCAGTCACAGAAATGGGTCTTATAGGACATGTGACAGGAAAAGCAAAACGCATTGTGCCACGACCCCCACCGGCACGTTATACTCGTCCTTCACGGCTGACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCATTTGATGAACATAGCCAGGTCTGCCCCATTTGCTTGACCGCAGGAAAGGACTTGGCCTTTGGATGCGGCCACATGACCTGTAGGGAATGTGGATCAAGATTGTCCAATTGCCATATATGTCGCCAGCCTATCAGAAACCGAATAAGGCTATACACTGGGTGATTGGATCGCACCAAGAGGGTATTGAGACGATGTCAATGACAATCAGATGGATATGATGTACAGGAATCAAGGGTTAGACAATTAAGAAATGTATGTTGTATGGACAGAACTAGGACTGTTCTACTCATGGGTGTTGTGTGTGTGTGAGGTGAGGTTCAAATTCCCAATGGATGAGGACTCTGATGTACATAGGAAAAACAATGTGCTCATATGTAATTGTAAAAACAATGTAGTGTCAACTCCTTGTCAATATTTTATGATGCAAACAAGATTTCATGTGCTTACGCGTAAGCTTCTTTTAACCACTACTGGTTGTAATGAATAAGCTAATAGCAAAATTGTCATTAGCTCGA 1853 44.36 MGGWASSSAKRRNGGEKGGKTAAVSKEPPSLKKTDSGSGGGGSSRGKSLCRPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGMDFTKSNEWTGKVSFNNRSLHAVSDSPNPYENALSIIGKTLAPFDDDSLIPCFGFGDATTHDQTVFGFHSDNTPCHGFEEVIDCYKNIIPNVQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDDELSVQEEKTIKAIVDASAYPLSIVLVGVGDGPWDNMKKFDDKIPARDFDNFQFVNFTEIMSKNLGTPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTGKAKRIVPRPPPARYTRPSRLTPIPSNTSSASAFDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 18942708 18953086 + XM_039045413.1 Bhi10g00922 47263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00922 414 SUPERFAMILY RING/U-box 364 409 - -
Bhi10g00922 414 Pfam Copine 111 324 IPR010734 -
Bhi10g00922 414 CDD RING-HC_RGLG_plant 368 412 IPR045317 GO:0061630|GO:0070534
Bhi10g00922 414 ProSiteProfiles Zinc finger RING-type profile. 369 402 IPR001841 -
Bhi10g00922 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 355 413 IPR013083 -
Bhi10g00922 414 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RGLG4 46 413 - -
Bhi10g00922 414 SUPERFAMILY vWA-like 88 270 IPR036465 -
Bhi10g00922 414 MobiDBLite consensus disorder prediction 1 49 - -
Bhi10g00922 414 SMART VWA_4 86 289 IPR002035 -
Bhi10g00922 414 MobiDBLite consensus disorder prediction 335 358 - -
Bhi10g00922 414 Pfam Zinc finger, C3HC4 type (RING finger) 367 406 - -
Bhi10g00922 414 PANTHER COPINE FAMILY PROTEIN 1 46 413 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00922 Bhi-Chr10:18942708 Bhi11g01574 Bhi-Chr11:45582496 6.71E-154 dispersed
Bhi10g00922 Bhi-Chr10:18942708 Bhi07g01827 Bhi-Chr7:49631284 4.57E-162 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00922 K16280 - csv:101218058 714.916