Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00928 ATTCCTGTCTCTCCCTATTTCCTATCTTGCATTTGTTCTTGAATCTCTTCAGAGTATTCCCACAGAGAGAGATCTCTCAGCCTCAGCCTTCTCAGAGAGAATTAGACACCAAAAACCAAAGAGAGAAAAAATTATTCAGAATGTTCCATGCCACCAAGAAACCTTCCTCTATGACTTCTCATGACAGGCCAATGTGTGTCCAAGGCGATTCCGGTCTTGTCCTCACCACCGACCCCAAACCCCGTCTCCGTTGGACCGTCGAGCTCCACGAGCGCTTCGTCGATGCCGTCACTCAACTCGGAGGCCCTGATAAAGCCACCCCCAAGACCATCATGAGGGTCATGGGCGTCAAGGGTCTCACTCTCTACCATCTCAAAAGTCACCTCCAGAAATTCAGACTTGGAAAGCAACCCCATAAGGAATTCAATGATCAATCAATAAAAGATGGTATAAGAGCTTCAGCCTTGGAACTTCAGAGAAACAGTGGATCTTCTTCCAGTTTAATGGACCGTAGTATGAACGAAATGCAAATGATGGAGGTCCAGAGACGACTGCATGAACAAATTGAGGTACAAAGACACCTTCAATTAAGAATTGAGGCTCAAGGCAAATACATGCAAAGTATATTAGAGAAAGCTTGCCAAACCCTCGCCGGTGAAAACATGGCCGCCGCCAGCGCCGCCGCTGGACCTTTCAAAACCACTTCCAACAATATGGGAACAACCACCAATCTTGTCTCCGACGCCGCCATCAAAGACTTCATTTCACCTCCCCCACCTCACCACGCCTTCCCTCCTTTTCAAGACATGAACAGCCTATTTAACTCCGAACCGCCACCGCCTCCGCCGCCTCTCATTGACTGCCTCAAGAAGCCCAGCCCCTTCATCTCCGGCGCCGGTAAGACCCCCATTTTCTGGCCGGACGATCTCCGACTCCAAGACTTAGGAACCCCTTCAGCCACCTTAGCACCAGCGCCACCTTCCATCGGCGGCCCACCCGACTTGGACCCCCTACAATTGGAAATGTATGAATCTAAACCACCACCGCCACCGTCACTACTTGCCGTTGGCAACAACACGATGAATGAGAAGAAGTTCGACGTGACGTTAAAGCTCGAGAGGCCGTCACCACCGCGGTCGGGGCATTCCGACGAAAGGGTGAATAATAATGGTATGCCTAGTAATAGCAACCCTACAATGTCACAGCCACAGGGAAGAAATTCTTCATTTGGTTAATTAATTGATGTGTTATATGTGTAATAATTAGTGACTTGAATTTGAATGTAATTAACTAAATATAGATTAGGGGTTAGATCTTAACATAAATGCTTATACTGACTATTGTGTTTGGAAGGAACAAAGAATAATAATAAAAAAAAAAGACAACTAATAAGTGAAGAGTTTAGCTCTCT 1411 46.85 MFHATKKPSSMTSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDQSIKDGIRASALELQRNSGSSSSLMDRSMNEMQMMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAASAAAGPFKTTSNNMGTTTNLVSDAAIKDFISPPPPHHAFPPFQDMNSLFNSEPPPPPPPLIDCLKKPSPFISGAGKTPIFWPDDLRLQDLGTPSATLAPAPPSIGGPPDLDPLQLEMYESKPPPPPSLLAVGNNTMNEKKFDVTLKLERPSPPRSGHSDERVNNNGMPSNSNPTMSQPQGRNSSFG 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19061804 19064930 - XM_039044450.1 Bhi10g00928 47269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00928 364 MobiDBLite consensus disorder prediction 319 334 - -
Bhi10g00928 364 Pfam Myb-like DNA-binding domain 36 84 IPR001005 -
Bhi10g00928 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 90 IPR017930 -
Bhi10g00928 364 MobiDBLite consensus disorder prediction 335 364 - -
Bhi10g00928 364 MobiDBLite consensus disorder prediction 262 364 - -
Bhi10g00928 364 SUPERFAMILY Homeodomain-like 32 88 IPR009057 -
Bhi10g00928 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 1 229 - -
Bhi10g00928 364 MobiDBLite consensus disorder prediction 1 26 - -
Bhi10g00928 364 Pfam MYB-CC type transfactor, LHEQLE motif 132 169 IPR025756 -
Bhi10g00928 364 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 33 88 IPR006447 GO:0003677
Bhi10g00928 364 MobiDBLite consensus disorder prediction 1 17 - -
Bhi10g00928 364 Gene3D - 32 90 - -
Bhi10g00928 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 229 IPR044848 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01981 Bhi10g00928 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01981 Bhi-Chr5:61216090 Bhi10g00928 Bhi-Chr10:19061804 4.75E-114 dispersed
Bhi05g01982 Bhi-Chr5:61216090 Bhi10g00928 Bhi-Chr10:19061804 4.75E-114 dispersed
Bhi10g00928 Bhi-Chr10:19061804 Bhi11g01505 Bhi-Chr11:43469731 2.89E-57 dispersed
Bhi10g00928 Bhi-Chr10:19061804 Bhi05g01980 Bhi-Chr5:61216090 3.27E-124 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2149 PF00249 Myb_DNA-binding 2.00E-06 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00928 - - csv:101203721 655.595