Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi10g00928 | ATTCCTGTCTCTCCCTATTTCCTATCTTGCATTTGTTCTTGAATCTCTTCAGAGTATTCCCACAGAGAGAGATCTCTCAGCCTCAGCCTTCTCAGAGAGAATTAGACACCAAAAACCAAAGAGAGAAAAAATTATTCAGAATGTTCCATGCCACCAAGAAACCTTCCTCTATGACTTCTCATGACAGGCCAATGTGTGTCCAAGGCGATTCCGGTCTTGTCCTCACCACCGACCCCAAACCCCGTCTCCGTTGGACCGTCGAGCTCCACGAGCGCTTCGTCGATGCCGTCACTCAACTCGGAGGCCCTGATAAAGCCACCCCCAAGACCATCATGAGGGTCATGGGCGTCAAGGGTCTCACTCTCTACCATCTCAAAAGTCACCTCCAGAAATTCAGACTTGGAAAGCAACCCCATAAGGAATTCAATGATCAATCAATAAAAGATGGTATAAGAGCTTCAGCCTTGGAACTTCAGAGAAACAGTGGATCTTCTTCCAGTTTAATGGACCGTAGTATGAACGAAATGCAAATGATGGAGGTCCAGAGACGACTGCATGAACAAATTGAGGTACAAAGACACCTTCAATTAAGAATTGAGGCTCAAGGCAAATACATGCAAAGTATATTAGAGAAAGCTTGCCAAACCCTCGCCGGTGAAAACATGGCCGCCGCCAGCGCCGCCGCTGGACCTTTCAAAACCACTTCCAACAATATGGGAACAACCACCAATCTTGTCTCCGACGCCGCCATCAAAGACTTCATTTCACCTCCCCCACCTCACCACGCCTTCCCTCCTTTTCAAGACATGAACAGCCTATTTAACTCCGAACCGCCACCGCCTCCGCCGCCTCTCATTGACTGCCTCAAGAAGCCCAGCCCCTTCATCTCCGGCGCCGGTAAGACCCCCATTTTCTGGCCGGACGATCTCCGACTCCAAGACTTAGGAACCCCTTCAGCCACCTTAGCACCAGCGCCACCTTCCATCGGCGGCCCACCCGACTTGGACCCCCTACAATTGGAAATGTATGAATCTAAACCACCACCGCCACCGTCACTACTTGCCGTTGGCAACAACACGATGAATGAGAAGAAGTTCGACGTGACGTTAAAGCTCGAGAGGCCGTCACCACCGCGGTCGGGGCATTCCGACGAAAGGGTGAATAATAATGGTATGCCTAGTAATAGCAACCCTACAATGTCACAGCCACAGGGAAGAAATTCTTCATTTGGTTAATTAATTGATGTGTTATATGTGTAATAATTAGTGACTTGAATTTGAATGTAATTAACTAAATATAGATTAGGGGTTAGATCTTAACATAAATGCTTATACTGACTATTGTGTTTGGAAGGAACAAAGAATAATAATAAAAAAAAAAGACAACTAATAAGTGAAGAGTTTAGCTCTCT | 1411 | 46.85 | MFHATKKPSSMTSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDQSIKDGIRASALELQRNSGSSSSLMDRSMNEMQMMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAASAAAGPFKTTSNNMGTTTNLVSDAAIKDFISPPPPHHAFPPFQDMNSLFNSEPPPPPPPLIDCLKKPSPFISGAGKTPIFWPDDLRLQDLGTPSATLAPAPPSIGGPPDLDPLQLEMYESKPPPPPSLLAVGNNTMNEKKFDVTLKLERPSPPRSGHSDERVNNNGMPSNSNPTMSQPQGRNSSFG | 364 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 19061804 | 19064930 | - | XM_039044450.1 | Bhi10g00928 | 47269 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi10g00928 | 364 | MobiDBLite | consensus disorder prediction | 319 | 334 | - | - | |
Bhi10g00928 | 364 | Pfam | Myb-like DNA-binding domain | 36 | 84 | IPR001005 | - | |
Bhi10g00928 | 364 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 30 | 90 | IPR017930 | - | |
Bhi10g00928 | 364 | MobiDBLite | consensus disorder prediction | 335 | 364 | - | - | |
Bhi10g00928 | 364 | MobiDBLite | consensus disorder prediction | 262 | 364 | - | - | |
Bhi10g00928 | 364 | SUPERFAMILY | Homeodomain-like | 32 | 88 | IPR009057 | - | |
Bhi10g00928 | 364 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR APL | 1 | 229 | - | - | |
Bhi10g00928 | 364 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Bhi10g00928 | 364 | Pfam | MYB-CC type transfactor, LHEQLE motif | 132 | 169 | IPR025756 | - | |
Bhi10g00928 | 364 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 33 | 88 | IPR006447 | GO:0003677 | |
Bhi10g00928 | 364 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Bhi10g00928 | 364 | Gene3D | - | 32 | 90 | - | - | |
Bhi10g00928 | 364 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 1 | 229 | IPR044848 | GO:0003700 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bhi05g01981 | Bhi10g00928 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi05g01981 | Bhi-Chr5:61216090 | Bhi10g00928 | Bhi-Chr10:19061804 | 4.75E-114 | dispersed | |
Bhi05g01982 | Bhi-Chr5:61216090 | Bhi10g00928 | Bhi-Chr10:19061804 | 4.75E-114 | dispersed | |
Bhi10g00928 | Bhi-Chr10:19061804 | Bhi11g01505 | Bhi-Chr11:43469731 | 2.89E-57 | dispersed | |
Bhi10g00928 | Bhi-Chr10:19061804 | Bhi05g01980 | Bhi-Chr5:61216090 | 3.27E-124 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2149 | PF00249 | Myb_DNA-binding | 2.00E-06 | CL0123 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi10g00928 | - | - | csv:101203721 | 655.595 |