Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi10g00929 | GAACCTGCGCAGTCACTGATGACTGATTTAAAAACGTTGAAAAATCTTTCCCAGAACATGGTGTACATCAGTTGGACAGATGTTGAGTGGAGAAGACGAGTATTAATTTGTTAATTGCTGCAGCCATTTTTGAACTCCAAAGAGGAAGAAGAAGAAACATCAGAGATCGACAATGACTATGACGGTCGCTGCAAGAGTAATCGCAACAGCTCGATCAGTGGTTCGATCGAGCAGGCTTCCTCTTCTATCTCAATCTTCTTCGCAGAAATCTCACTCCCACACTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGCATTGCTACTCGTCTTCACAGTTCTGGATTGTTACGAAGCCAAGGCCTCATTGGAGGGAAGTGGATTGATGCTTATGATGGGAAGACCATTAAGGTTCACAATCCAGCTAATGGTGAAGTTATAACCAATGTTCCGCTCATGGGTAAAAAGGAGACTGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTTACTGCAGCTGATCGGAGTAATCGCTTACGCAAATGGTATGAGCTCCTAATGGCCCACAAAGAAGAGATTGGACAGCTGATAACCTTAGAGCAAGGCAAACCCTTAAAGGAAGCTGTGGGTGAGACTAACTATGGAGCTAGCTTTATTGAGTTCTTTTCCGAGGAAGCAAAACGAGTATATGGTGACATAATCCAGCCAACTATAGCTGATCGTCGAATTTTGGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTATTACCCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGGGCCTGCTCTTGCATGTGGTTGTACAGTGGTCATAAAACCCTCTGAGCTTACCCCCTTGACAGCTTTAGCAGCAGCTGATCTCTCACTTCAAGCTGGAATACCCCCAGGTGTTGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTTCTCAGGTAAGAAAGATCACTTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGTGCTGCTGGAACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCCCCTTGCATAATATTTGATGATGCAGATGTGGATGTTGCAGTAAAAGGAGCTATTGCAGCAAAGTTCCGGAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGAATATACGAGAAATTTACAAATGCTTTCTCAAAAGCCGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCACCACAAAGGGAGCCAAAGTTCTTCTTGGTGGTAAAAGACACAGACTTGGGATGACATTTTTTGAGCCAACAGTTCTTGCTGACGTAAATAGTGACATGCTTGTATCCAGGGAGGAAGTATTTGGTCCCGTGGCACCCTTGCTGCCATTCAAAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAACAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATATGGAATGGTTGGTGTTAATGAAGGTCTAATTTCTACAGAGGTGGCTCCATTTGGTGGCGTTAAACAGTCGGGCCTTGGAAGGGAAGGGTCAAAATATGGGATGGACGAATATCTTGAGCTGAAATATGTTTGCTTGGGGAATATGGACCGCCCCTGATGAGCAAGGAACCTATCTGTCAGGGAATAATGGGCTTGGGCTTCTTCTTGGGCCCAGTGACCAAAATAAAAACATGGAGGCCCATAAGTCAAAATTCGTTTCCGTTTTTTCCCCTTCATTGTAAAAGAATAATAATGCAAGCTCGTTTGAGGAAATAAATAATATTTTGATGTTATTGAGTGTTTCCTCCTCA | 1979 | 43.71 | MTMTVAARVIATARSVVRSSRLPLLSQSSSQKSHSHTLLIRQMSSEAQSIATRLHSSGLLRSQGLIGGKWIDAYDGKTIKVHNPANGEVITNVPLMGKKETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLMAHKEEIGQLITLEQGKPLKEAVGETNYGASFIEFFSEEAKRVYGDIIQPTIADRRILVLKQPVGVVGVITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAADLSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIIFDDADVDVAVKGAIAAKFRNSGQTCVCANRILVQEGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKGAKVLLGGKRHRLGMTFFEPTVLADVNSDMLVSREEVFGPVAPLLPFKTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLELKYVCLGNMDRP | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 19072439 | 19087506 | - | XM_039045529.1 | Bhi10g00929 | 47270 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi10g00929 | 537 | Pfam | Aldehyde dehydrogenase family | 70 | 529 | IPR015590 | GO:0016491 | |
| Bhi10g00929 | 537 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 57 | 534 | - | - | |
| Bhi10g00929 | 537 | CDD | ALDH_F5_SSADH_GabD | 81 | 531 | - | - | |
| Bhi10g00929 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 76 | 523 | IPR016162 | GO:0016491 | |
| Bhi10g00929 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 309 | 498 | IPR016163 | GO:0016620 | |
| Bhi10g00929 | 537 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 57 | 534 | - | - | |
| Bhi10g00929 | 537 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 305 | 312 | IPR029510 | GO:0016491 | |
| Bhi10g00929 | 537 | SUPERFAMILY | ALDH-like | 58 | 535 | IPR016161 | GO:0016491 | |
| Bhi10g00929 | 537 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 333 | 344 | IPR016160 | GO:0016491 | |
| Bhi10g00929 | 537 | TIGRFAM | SSADH: succinate-semialdehyde dehydrogenase | 81 | 527 | IPR010102 | GO:0009013|GO:0009450 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi05g00953 | Bhi-Chr5:33483089 | Bhi10g00929 | Bhi-Chr10:19072439 | 4.30E-62 | dispersed | |
| Bhi06g01786 | Bhi-Chr6:50022447 | Bhi10g00929 | Bhi-Chr10:19072439 | 2.53E-106 | dispersed | |
| Bhi06g01787 | Bhi-Chr6:50022644 | Bhi10g00929 | Bhi-Chr10:19072439 | 2.53E-106 | dispersed | |
| Bhi06g01830 | Bhi-Chr6:51308111 | Bhi10g00929 | Bhi-Chr10:19072439 | 1.66E-60 | dispersed | |
| Bhi06g01831 | Bhi-Chr6:51308884 | Bhi10g00929 | Bhi-Chr10:19072439 | 1.68E-60 | dispersed | |
| Bhi09g00313 | Bhi-Chr9:6655025 | Bhi10g00929 | Bhi-Chr10:19072439 | 6.62E-63 | dispersed | |
| Bhi09g00314 | Bhi-Chr9:6655025 | Bhi10g00929 | Bhi-Chr10:19072439 | 6.62E-63 | dispersed | |
| Bhi12g01925 | Bhi-Chr12:61305691 | Bhi10g00929 | Bhi-Chr10:19072439 | 1.48E-62 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi10g00929 | K17761 | - | csv:101217352 | 944.88 |