Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00930 CGTTCCTGTTTTTCGTTGTGTCCATTGCCTTCCCTACGTTTTTTCTTCTTTCTCTCCATTTTTCTTTCTAATCCCTTTCTTCCTTCATTCCTTCCTTCTCCCCTCTCTCTAATTCTAGAAGGAGAGGAGAGAGAAAGAAAGGGTTTGCTTTGTCTTTGCCGTCTTACAAAGAGATTCATTCATTAATTTGATTGTTTTTTAGCATTTCAGAGACGATTAAACAAGTAATTTTGTCGATTTTCCCTCTTTTTGGTTGAAAGTCAAACAATGAGAAGGGCAAAGACTCAGCCTTCTATTGTTTAATCAATCTTTCTTTTCATAATAGCCATCGTTTTTGTGTCCCTTTCTCTGAAGTCTCCGAGACTTGGATCAAGTTTTGACGCGGAACCCATCTTTGTTTTTGTCTTTATATAACTGGGTTTCCTTCTGATTGGGGTTTGAGAGCTTTTACAGACGAAAGGAAATCCAGCTATTATGAGTTCCAACACCGCGTCTAGCTCTGGAGGTCCGGGATCGAACGATTCATCTTCAAATAGAAGGAATTCGAAGCGACCTAAATATTCGAGGTTTACCCAGCAGGAGCTTCCAGCGTGTAAACCCATTCTCACACCAAGATGGGTGATTTCCGCATTCATGTTAGTTAGCATTATCTTTGTTCCCATTGGAGTTGCTTCCTTGTTTGCTTCCAGAGATGTCGTTGAAATAATTGATCGTTATGAAACTGAGTGTATACCAGAAAGATTTAGAAACGATAAGGTCGGATTCATACAGGGCCCTGCAGTTAAAACTTGCCACAGAAACATAACTGTGCCAAAACGTATGAAGCAACCAATATACGTCTATTACCAGCTTGACAATTTCTATCAGAATCACCGCAGATACGTGCAGAGCCGTAGTGATAAGCAATTGAGAGATCCTGGCAGCGAGCATGATATAAGCTCTTGCAAGCCTGAAGACAATGTGAATGGGCGCCCAGTTGTTCCCTGTGGTTTGATAGCATGGAGTTTGTTTAATGATACTTATAACTTCACCCTTAATAATAAGCACGTTGCTGTGAATAAGGTCGGTATCTCATGGAAGAGTGACCGGGAACACAAATTCGGCAAGAATGTATTTCCCAAGAACTTTCAGAATGGTACTCTGAAAGGAGGCAAAACCCTAAATGAAAAAGTACCATTAAGTCAACAGGAGGACCTTATCGTGTGGATGCGAACTGCTGCTCTTCCCACATTCAGAAAGTTGTATGGAAAGATAGAGGTCGACCTTGAGAAAAATGATGTAATAGATGTGGTTTTGGAGAACAATTACAACACTTACAGTTTTAACGGCAAGAAAAAGCTTGTCCTTTCTACAACTAGCTGGCTTGGTGGGAAGAATGATTTTCTTGGAATTGCTTATCTTACTGTTGGTGGGTTATGCTTCTTTTTGGCAATGGCTTTCACAGTCGTCTATCTTGTTAAGCCAAGGCGACTTGGGGACCCGTCATATCTGTCATGGAATAGAAACCCAGGTGGGCACTGAAGCAGGAGCTGCTAGAACACGGTTTGTTGTAATTTTATTTGTAATATTATTTTGATGTGAGCATATTGAAAACAAAGGAAAGAGCAGGATGTTTAACAAATTGTTGTAATGAAACTTTTGTTTTCCTTTTTATATGAA 1659 40.08 MSSNTASSSGGPGSNDSSSNRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDRYETECIPERFRNDKVGFIQGPAVKTCHRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDPGSEHDISSCKPEDNVNGRPVVPCGLIAWSLFNDTYNFTLNNKHVAVNKVGISWKSDREHKFGKNVFPKNFQNGTLKGGKTLNEKVPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19158481 19161791 + XM_039045546.1 Bhi10g00930 47271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00930 348 PANTHER ALA-INTERACTING SUBUNIT 3 7 347 - -
Bhi10g00930 348 MobiDBLite consensus disorder prediction 1 20 - -
Bhi10g00930 348 MobiDBLite consensus disorder prediction 1 31 - -
Bhi10g00930 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 68 332 IPR005045 GO:0016020
Bhi10g00930 348 PIRSF Lem3/Cdc50 1 344 IPR005045 GO:0016020
Bhi10g00930 348 MobiDBLite consensus disorder prediction 140 159 - -
Bhi10g00930 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 7 347 IPR005045 GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01743 Bhi-Chr1:36567311 Bhi10g00930 Bhi-Chr10:19158481 0 dispersed
Bhi01g01744 Bhi-Chr1:36567311 Bhi10g00930 Bhi-Chr10:19158481 0 dispersed
Bhi03g00100 Bhi-Chr3:2768602 Bhi10g00930 Bhi-Chr10:19158481 2.12E-138 dispersed
Bhi03g00101 Bhi-Chr3:2773496 Bhi10g00930 Bhi-Chr10:19158481 4.45E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00930 - - csv:101216400 645.58